result

Gene information

Detail information of AfisC1G07036

Location

Gene	Chr	Start	End	Strand
AfisC1G07036	chr1	1275218897	1275224497	+

Sequences

CDS

Protein

Gene

>AfisC1G07036
ATGTTCTCCTTCTCCTTCCATAGAAAGTCCAAACCTCCACCCCGCCGCCGTCTCGAGCGCCGCAACGCCTCCAAAAACATAGCATACTCCGCCCCATCCGATAATTCGCCTTCTTCACCCTCTCCTGACCGCATCACCCGCTCCCTCGACCTCTCCAATCCCAACCAGACTAGCTTCCGCATTGGCGGCAGCGTTGAAGGCGAAGTCGACCACATCTACCGCTGCCTCGGTATATCTGGACCTGAAGATTTCGCTGTATCTTTCTCGGATTGGGCTCAGCGCAAGAAAAATCCCGATAATCAGAACCCTAGATCTGAAAACTCCAGTCTTAACTCAAATTTAAATGGTGGGATTAGGGGGACGAGGCCGCCGGTGATTCGTCCCCCTAAACCATCTATGGAGATCGAGATTAGATCTGCACCGTCGGTACTTGTGCCCGCGGTGGAAAAGGCGGGTCCGGCTTGGGATTTAATGAAGTCGCCTGAGCATCCCGTTCAGCTGCTGCCTGCTGCCGAGGAGGAGAATAATTATTACGAGGATGGGAATTTCACATCAAACGAGGAGGATGATGACAGTAGCAGTACAACGACTAACACAGAGGCAATGATTTTGGTGTCGCCAAATGGGAGGTTTAAGAAGGAGATCAAGCGTTGGGAGAAAGGGAATTTGCTTGGTAGTGGATCTTTTGGAACTGTTTATGAAGGGTTTAGTGAGTAAGTACTCTAATGACCCTGTTTCATTGTTAGTTGATATAAGGTGTAACGTAACAAACTAGGAATTGATTTTATAATCGCATTTAACACATCCATGATTTAGGTAGAAGTTAACCAAACCTACTCAAAACAATCTGAACACATGTAGATGTTTATATTGATTGAGTTTGCAGGTGGAAAATATACTGATAAAACCACTTAGCTGAACTATGAGTTTTCCCTTTGTAGACCATAGAGTTAAAAATATGGCATTTAACAAGGGTTTGTAAATTTTATCCCATCTGAAAATTGAGTGGATTTCATAGGTATCATAAACAACTTTCCATGCTTACTAATGTTAATAAGCAATAACCAATTATTTGGTCAGTATAAGGTAACAGTTTTGAATTTCTTATATTCATGCATTTAAACTTTAATGGTTTGACCATGAAGAACTTTAGGGTTTAAATAATTTTTGTTAAATGCGATAATTCTGTTTGTCTCATAACCTTGGATTTTACAGATGGTATTCCCAAGATCTTTTTTTAGATGCCTCAAAAAGCTTATTAACTACGTTGCTGCAATGAAATTCCCAAATTATGCCGATGGTTTTGTTAAATATTTTTCATCTCATTTACCAATCAATACGAATACTTCTTTTTTTAGACTTTTGTCAACCACAACTCTGTGATTGTAACGGTCACAAGTCTTAACTTAAAAATTCATCTTGCTTTCTATGATAATTACAGTTGATCTGAAAATAATAATCATATTTGTTGATTTCATAAAAGTTCGGGTTGTCGTGAGAGTTTTGTTTGTTTATTATTCATTTCTTCTGATTTCCGCAGCAATGGCTTTTTCTTTGCTGTTAAAGAAGTGTCTTTACTCGACCATGGAAGTGATGCGCAACAGTGCATTTTTCAACTTGAGCAAGTGAGATAAACCCTTGTTATAATTATCTATACATTACTATACCACAATTTTAATTTTCAGCTTCAGTTTTCATGTACAATGTACAACTTCCTGTCCTAAATTATTAGTTATTATGTATAACATGTTTCTTACTACTGCCTCAATTTATGTAAATTTTTAATTATTTCAGGAAATCGCCCTCTTAAGCCAGTTTGAACATGAAAATATTGTTCAATATTATGGAACTGATAAGGTATCTCTTCATCTCCATGATTCATTTTCAGTTTAACAAGCTTTGCTGGAAATTTTTTGTTTCTTAATCACACTTTTATTTTAGAGCTTTACCAAGATTAATGTGTATTAGTTAATATTAGTTTTATGAACTCCGTCATCCTGAAGGAGAGAAAATATGGAAAGCAATAATGTTATAGGATTATTTAAGAGTCTTTTCCGCTATATCATGAGTAAAATGAAACTTTACTTTTAAACAGATATACAGTCATGCATATATCGTCTGTGACTGTATATCATTGCTTCTGGTTAATCGTGTGTGTGTCTGTACATATGTTTGTGCGCGTGCGCACACTTAGATAATGTATTTAGAACCAAGGTTCGAAATTCCGTTTTCCGTTTCCGTTTCGGTCATTGGTAATTTTAAAATTTCCGGTTCCGTTCCGAAAATTTCGGAAGTTCCGTTTTAATTCCGATTTTCTAATTCCGGTACCTTTTTTGCTTTAATTTGCTATTTACACTAATAAATATCCAATATTATCATATATAGTACATATTTTATATTACATATAAAATACACTTTAATTAAAAAACAGTTGTTTAAGATTCAATATTGTTCAATAAAGATTTTAAAATTTTGGTCAATTTTTGAAATTTTTATTATGATTCGATGTAAATTAACAAAAGTATAACAACTTTTTTGTCCATAAACGTGATTTTTTTGTCCATTTATTTATTGTCATATTTAATTTGTTTTCCTTTTTTAATTACTATATGTTTATTGTATTTTTTTATTTTTTTATAATTTTTTTCAATATTTGAAAAGTAAATCCGGAATTTGGACCGGAACCGGAATTTTAACCGGACTCCGTTCCGGTTATGAACGGAACCGGAACGGAATAACCGGAATTCCGTCGGAATTTTGAACCATGTTTAGAACACAGATCTTCAGGAATCCATAAAAAGATGCCCATCTTATCAGTCTTCTACAGATAACTATAATCTCTCTTTTGTTGTAGATACACACTCCACTTTGAGTTGTATTAAAAACAAGTAACATAACCCTGAACTTTACTGCCTATTTTTTTACATATTAGATGGCAAGCTATATGAGATGTTACAACACTACACTATTTCGCTGCCTCTCCCTAGCTTCCTCCCATGGCATCTTCAGCTATTATGTATAAATAATTTAGAACCAGGGATGGTAATCATATACTTTATTCCTTGGATAGATACAATTTACCATCATGAAATCTATAGTACTTAGAAATGTGTAATTTCTACACGTTCATGAATATTAAGGTGGATATGTACTATGTTTGTAAACAATTTCATACCTAGTCTCCTAAACTGAGATACACACACATCAACTGTCTTATACTTTTCTTGACACCAAATGAGTTATTAAAGTGGCAACAATTTTGTTGCAGGAAGAAGCAAAGCTATTTATTTTCCTTGAACTTGTAACTCAAGGTTCTCTAGCATCATTGTACCAAAAGTATCGCCTTCAGAACAGTCAAGTATCGGCATACACCAGGCAGATATTAAAGGGTTTGAACTATCTTCATGAACGCAATATAGTTCACAGGTCTATAAATCTTTCTTACTTGTATTACTCCAAGAACATATTCATATCTGTGTGCAAATGTTATGCAATGCTGAGAAGTCTTTGCAAAGTCTTTCTTAAATTATTGGTTCCTTGTCTCCTGACAAGGCAAATAAAATGGAGTTCATGTCCTCTGTAATACTCTACTTTTTGTATTTGTAAGGAGAAAGAAACCTATCAATCGTATTACTCCCATAAGGTCAAATTCTCCGCTTCAATGAAATAATATTCTGGAGTTATTTGCATGTTTAAAACTTGTAATTGAAACGTCTATCATCTAGTAAGATACTTGTATGTATTCTCATTTTTCAGAGACATAAAATGTGCCAACATATTGGTTGATGCAAATGGATCAGTGAAACTAGCAGATTTTGGATTGGCCAAACAGGTCTGGTGTATTCTGTGATGCATTTCAGTTTTTATTAGTTATTTTCATGCTGCTGACGTTTTGGAGTGAAATAAATGCAGATTACCAAGATCACTAAGTTGAGATCCTGCAAAGGGAGTGTGTATTGGATGGCTCCAGAGGTTGGTTTGTACTCTTTTAATAACAATTTTCGTATTACATTAACATCAAACAAAGGTAGAAATCTATTGTTAATGCAATTATGTTCTTGGTTGTATCTGAAAGTCAGTTTGGGGATGTCGACTTTTGCCATTTTGTTGTATAAACCTGAGTCCTGACACAAGGGGTATGTTTAAAATTATTGGCAAGAAAGGGGTATTTAAAATTATTGGTAAGAAAGGTTAACCATAATTTTCAATACCTTTTCTACTCTTATATGAACTGATAACTAGGTAGCATAACATGGAACCGATCATGAATGAGTTGATGATGGAGAATTTGGAATCCATGTAATATTTTAGTAGAACTGGTAAAATATAACGGTACAGCTGCAATATTTTCAAAACCTAGAGGACATCTCATTTTAAAAGGAAAGGCAAGGTAGTTTATGCTTGGGTGTCTCCAATTGTATGTGGTAAGTAATAGATCCAGATTGGAAAAAAAAGAGAACAGTCATACATCATGAACGATAATAGAGGTGGAGTGATATGCACACACGTGTGTTTTTTAACAACTCTAATATTAGTGTGTGTGGATAGGTGAGCGAAAGGGACTGTGATTAAACTTGTAACACTCAATGTGGCTTTGGGAAGGAACTCATTATAATAATTTAGGCTTATCTCTCATTGGTATGTTCAATTTTGCAGGTTGCTAACCCAAAAACATCATATGGGCCAGCAGCTGACATATGGAGCCTTGGCTGCACTGTTTTAGAGATGTTGACTCGTCAGGTTCCCTACAACAACATGGAATGGGTAAGTACCGTACTGACTACTGAGTATATTTTTGTTTCCTCTATCACTTTTGCACTGTTTTGGGAAATCTTTCACTCAACAATCAAGCTATTTGTTATGATCAAGCAATTCAGTCAGATTCTAATGAATTATCCTTAAATGCATACCTAGCATATTTTTGGTAAGGTTTTGTATTTGTGTACTAAATGGATGATCATTGATACTGCAGCAACACGTTTTCTTCATGGTTGGTAAAGGGGAAAAACCACCCATCCCCAGCAGCATCTCAAGGGACGCGCGTGATTTCATCAACCAGTGCATACAAGCAAGCCCAGCCGAGAGACCATCTGCCTCTCAGCTATTAGACCACCCGTTTGTCAAAAGGTCCCTTCCATATTCAGGACCTGGATCTGGTTATTCTTCCCCTAGCAATGACAGATGAATCTGACACTCTATTCAAATTGGATGCTATCGCTCTTTCTGCCTCTCTTGTTAGCACCCACGTGATATCTATCACTTTGCAAGAAGCCAATTTGTGTTGGCTGGAGGCATCAATTTGTTTATTGGTAGATTGGGCGGTCTTGCAGTTTTGAATTATGAAAATTTCATCCTATGTATATTTGCATGTATGCATCTCCATGTTGCCTACTTGTTTAGGAACTGTAATTGCGATAGCTTCGTGTTTTGCATGCAGCATACCAATTTGCTATGTTGAGTGAAAATTACGATTTATGTTAATTTTCATTATTCAATCTCTTAACTGCATTGCAATTTCATGTGTTTTTAATTTGAAAATTTGTTCTGTACGCTTTCGTTTATGATTTCTCAAATGTTGCTCTCATTATGTTAAATAAAAAC

Functional annotation

Database	accession number	e-value	annotation
nr	XP_010916553.1	1.4e-136	mitogen-activated protein kinase kinase kinase 1
Swissprot	Q39008.2	3.0e-102	Mitogen-activated protein kinase kinase kinase 1
trEMBL	A0A804L6V3	1.0e-136	(wild Malaysian banana) hypothetical protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G08500.1	50.26	1e-103	374	ARAKIN;ATMEKK1;MAPKKK8;MEKK1	MAPK/ERK kinase kinase 1

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC1G07036	AT4G08500.1	392	142	8	118	476	221	592	50.26	1e-103	374
AfisC1G07036	AT4G08500.1	90	30	4	14	96	23	107	53.33	1e-13	75.1
AfisC1G07036	AT4G08480.1	389	152	9	117	473	388	757	47.81	2e-97	353

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	219	471	231.3	1.1e-68

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0005515	F	protein binding
GO:0000747	P	conjugation with cellular fusion
GO:0000919	P	cell plate assembly
GO:0001568	P	blood vessel development
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0005829	C	cytosol
GO:0004702	F	receptor signaling protein serine/threonine kinase activity
GO:0005730	C	nucleolus
GO:0005856	C	cytoskeleton
GO:0006351	P	transcription, DNA-templated
GO:0007009	P	plasma membrane organization
GO:0009524	C	phragmoplast
GO:0009555	P	pollen development
GO:0009793	P	embryo development ending in seed dormancy
GO:0009941	C	chloroplast envelope
GO:0010098	P	suspensor development
GO:0010103	P	stomatal complex morphogenesis
GO:0010229	P	inflorescence development
GO:0022622	P	root system development
GO:0032147	P	activation of protein kinase activity
GO:0032550	F	purine ribonucleoside binding
GO:0032559	F	adenyl ribonucleotide binding
GO:0035420	P	MAPK cascade involved in innate immune response
GO:0043123	P	positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043168	F	anion binding
GO:0043405	P	regulation of MAP kinase activity
GO:0043622	P	cortical microtubule organization
GO:0045995	P	regulation of embryonic development
GO:0046777	P	protein autophosphorylation
GO:0048046	C	apoplast
GO:0051302	P	regulation of cell division
GO:0051510	P	regulation of unidimensional cell growth
GO:0061387	P	regulation of extent of cell growth
GO:0071323	P	cellular response to chitin
GO:1900150	P	regulation of defense response to fungus
GO:1900745	P	positive regulation of p38MAPK cascade
GO:1902065	P	response to L-glutamate
GO:2000071	P	regulation of defense response by callose deposition

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network