Detail information of AfisC1G07086


Location
GeneChrStartEndStrand
AfisC1G07086chr112853212551285331809+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020092928.19.5e-176transcriptional adapter ADA2-like
SwissprotQ75LL6.26.4e-169Transcriptional adapter ADA2
trEMBLA0A6P5FHJ06.8e-176Transcriptional adapter

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT4G16420.350.391e-138 490ADA2B;PRZ1homolog of yeast ADA2 2B

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag89100.t1
Allium fistulosumAfisC1G07086
Allium sativumAsa7G02558.1
Arabidopsis thalianaAT4G16420.1; AT4G16420.2; AT4G16420.3
Oryza sativaLOC_Os03g53960.1; LOC_Os03g53960.2

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00569.14ZZDomain529436.42.9e-09
PF00249.28Myb_DNA-bindingDomain11315545.45.8e-12

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0003677FDNA binding
GO:0003682Fchromatin binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0003713Ftranscription coactivator activity
GO:0004402Fhistone acetyltransferase activity
GO:0006338Pchromatin remodeling
GO:0006357Pregulation of transcription from RNA polymerase II promoter
GO:0009631Pcold acclimation
GO:0009733Presponse to auxin
GO:0009735Presponse to cytokinin
GO:0031589Pcell-substrate adhesion
GO:0035066Ppositive regulation of histone acetylation
GO:0042127Pregulation of cell proliferation
GO:0043167Fion binding
GO:0044763Psingle-organism cellular process
GO:0051704Pmulti-organism process
GO:0070461CSAGA-type complex

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K11314TADA2A, ADA2; transcriptional adapter 2-alphaEC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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