Detail information of AfisC1G07239


Location
GeneChrStartEndStrand
AfisC1G07239chr113150501351315057019-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020274981.12.4e-115protein EFFECTOR OF TRANSCRIPTION 2-like isoform X1
SwissprotF4K933.18.8e-67Protein EFFECTOR OF TRANSCRIPTION 2
trEMBLA0A5P1ECW41.7e-115Protein EFFECTOR OF TRANSCRIPTION 2-like

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G56780.136.474e-75 278ATET2;ET2effector of transcription2

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag176504.t1
Allium fistulosumAfisC1G07239
Allium sativumAsa7G05942.1; Asa7G05946.1
Arabidopsis thalianaAT5G56770.1; AT5G56780.1
Oryza sativaLOC_Os07g39800.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
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Gene Ontology
AccessionOntologyName
GO:0005886Cplasma membrane
GO:0003006Pdevelopmental process involved in reproduction
GO:0003677FDNA binding
GO:0005634Cnucleus
GO:0005737Ccytoplasm
GO:0006355Pregulation of transcription, DNA-templated
GO:0009555Ppollen development
GO:0044702Psingle organism reproductive process
GO:0048869Pcellular developmental process
GO:0050793Pregulation of developmental process

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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