result

Gene information

Detail information of AfisC1G07364

Location

Gene	Chr	Start	End	Strand
AfisC1G07364	chr1	1331146599	1331147745	-

Sequences

CDS

Protein

Gene

>AfisC1G07364
GTCGTTTCTTCGAAATCATCTGCTTTCAGCTAAGTTTTCCCTCTTCTCTCCATTTTTTCTTATTATATTCTTTTATTTTTATCATTTATTTGGGTTTTTGTATACTGTTATTGCCTGATTGGGAGCTGCCAATCAATTGCAACTCAGTTTTATTTCAAAATCCGATCTTACATTCGTTAGAATCCCGATTTCTTCATAAAATTAAGACCTGGACCATGAATCCAATGAATTGAATGTTCGTAATATGAACATCACAGATTTAACTTTCTGCTTTCTCCACTCTTTCTCCGTTGTGTACCTCTACTGGTTTTACCTCTTTTCATGAATTGATCCTCCTTGATTTTCAGTAGAAGTTTATATTTTGATTAATACCCATCTCATAAAACAAAAACTCAATCTGCAAATATCGGTATAATGGCTTCTTTGCCTGCCCGCCAAACATCAAGCTCTGAAGAAGACCCAAAAAAGAGAAAGAGAATGGTCTCAAACAGAGAGTCAGCTCGTAGATCTAGAATGAGAAAGCAGCAACATTTAGATGATTTGATTAAACAAGTTGCTCAGCTCAAGGACGAAAACGCTAAAATTGCTATGCAAATCAATGTTTGCACGGAGCAGTATTTGAAAGTGAATGGGCAAAACACGATTTTGAAGGCACAGATTGATGAATTGGCTGGAAGGCTTAGGTCTTTGGTTTCCGTTCTTCAGTTCATTGAAGAATTTAGTGGGATGCAAATGGATATTCCTGAAATTCCTGAACCGACGGTAGAGCCGTGGCAGTTTCCTTTCCCGAATCAACCCATCATTGCTTCTGCAAGTATGTTTGAATTCTGATTTGAGCTTATTGCTAGATTCTTGTAGGAATTTGAGTATTTAGCTCTGATGTTTGTGTCTTTAGTTGTATTGTCATGTTGATTCGCATTACATGTTGCATTTGGTATGAACTTGTTCTCCCTATATAATATATTGTATGTTTATTCATGTTTTAGACCCTTTTTAGATATATATTATCAGCGTATCAGGTTGATTCTGTAGTTCTATCACATGATTATATGAGAATTTCTGCAGTTGTTCGAATTGCATGATCAGTTGTTTGTATTGGCACGTGCTGTATAACTTTGAATATATCATACATGATACGTTGTATGAT

Functional annotation

Database	accession number	e-value	annotation
nr	ONK63257.1	1.6e-32	uncharacterized protein A4U43_C07F13070
Swissprot	Q9SI15.1	1.1e-09	Protein FLORAL TRANSITION AT THE MERISTEM 3
trEMBL	A0A5P1EDJ0	1.1e-32	BZIP domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G62420.1	52.41	3e-37	150	ATBZIP53;BZIP53	basic region/leucine zipper motif 53

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC1G07364	AT3G62420.1	145	61	1	1	137	1	145	52.41	3e-37	150
AfisC1G07364	AT1G75390.1	127	59	2	15	134	39	165	48.03	1e-26	115
AfisC1G07364	AT4G34590.1	133	68	2	17	138	27	159	40.60	4e-22	100

Ortholog group

Species	Genes
Allium cepa	g456581.t1
Allium fistulosum	AfisC1G07364
Allium sativum	Asa0G04894.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00170.18	bZIP_1	Family	14	74	45.1	7.4e-12

Gene Ontology

Accession	Ontology	Name
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0005634	C	nucleus
GO:0006971	P	hypotonic response
GO:0009267	P	cellular response to starvation
GO:0009744	P	response to sucrose
GO:0009845	P	seed germination
GO:0044212	F	transcription regulatory region DNA binding
GO:0045893	P	positive regulation of transcription, DNA-templated
GO:0042803	F	protein homodimerization activity
GO:0043565	F	sequence-specific DNA binding
GO:0046982	F	protein heterodimerization activity
GO:0071215	P	cellular response to abscisic acid stimulus
GO:0071333	P	cellular response to glucose stimulus
GO:0080149	P	sucrose induced translational repression
GO:2000693	P	positive regulation of seed maturation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K09060	GBF; plant G-box-binding factor	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network