Detail information of AfisC1G07405


Location
GeneChrStartEndStrand
AfisC1G07405chr113386471291338647642-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020677555.17.0e-13transcription factor PCL1-like
SwissprotQ9SNB4.13.7e-11Protein PHYTOCLOCK 1
trEMBLA0A8T3B9Y65.0e-13HTH myb-type domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT3G46640.373.339e-1368.6LUX;PCL1Homeodomain-like superfamily protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
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Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
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Gene Ontology
AccessionOntologyName
GO:0003677FDNA binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005634Cnucleus
GO:0006355Pregulation of transcription, DNA-templated
GO:0009409Presponse to cold
GO:0009909Pregulation of flower development
GO:0042753Ppositive regulation of circadian rhythm

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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