Gene information

Detail information of AfisC1G07507

Location

Gene	Chr	Start	End	Strand
AfisC1G07507	chr1	1358225099	1358225879	-

Sequences

CDS

Protein

Gene

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020254212.1	7.4e-23	mini zinc finger protein 2-like
Swissprot	B8BIU8.1	1.1e-23	Mini zinc finger protein 1
trEMBL	A0A7J7NAS9	3.4e-22	ZF-HD dimerization-type domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G74660.1	72.41	6e-22	99.0	MIF1	mini zinc finger 1

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC1G07507	AT1G74660.1	58	16	0	46	103	37	94	72.41	6e-22	99.0
AfisC1G07507	AT3G28917.1	67	18	2	44	109	29	94	70.15	2e-21	97.4
AfisC1G07507	AT1G18835.1	58	14	1	46	103	24	78	70.69	2e-19	90.5

Ortholog group

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF04770.9	ZF-HD_dimer	Family	46	98	98.1	2.3e-28

Gene Ontology

Accession	Ontology	Name
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0005739	C	mitochondrion
GO:0046872	F	metal ion binding
GO:0005634	C	nucleus
GO:0009640	P	photomorphogenesis
GO:0009723	P	response to ethylene
GO:0009733	P	response to auxin
GO:0009735	P	response to cytokinin
GO:0009738	P	abscisic acid-activated signaling pathway
GO:0009739	P	response to gibberellin
GO:0009741	P	response to brassinosteroid
GO:0009793	P	embryo development ending in seed dormancy
GO:0010371	P	regulation of gibberellin biosynthetic process
GO:0010431	P	seed maturation
GO:0045893	P	positive regulation of transcription, DNA-templated
GO:0045892	P	negative regulation of transcription, DNA-templated
GO:0019760	P	glucosinolate metabolic process
GO:0042803	F	protein homodimerization activity
GO:0043392	P	negative regulation of DNA binding
GO:0043565	F	sequence-specific DNA binding
GO:0048509	P	regulation of meristem development

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network