result

Gene information

Detail information of AfisC1G07559

Location

Gene	Chr	Start	End	Strand
AfisC1G07559	chr1	1369864299	1369866462	+

Sequences

CDS

>AfisC1G07559
ATGATTTTTGTTCATATCTTAACAATTTGCATCACACTGTCACTCCCAATCTTAACATACACAGCATGTCCTTACAACTTCTCCAGTGCGATTTCCTTGATCCCCACCGACTGCTACGCCAACTATACCACGCCCTCTGCCACCACCTGCTGCTGGTACGTTTATGCAGCCTATCTCTATTCACTGATCTTATACTCCAACATTTCAAATAGTGCATTCCTACCTTCATCCACAACTGCACAGTGTGCTTCCTCATACGCCTCCCTTCTCTTCTCCAAACATCTAATCCACCCTCAACTTCTCAGCTCTTCTTCCTGCAACATGTCCGGTGATGCCTTGCGTTTTGTTGCTGGTAACAAGCCCTGTCAGTTTCCTACCGTCGACAAAATCAAATCTGCAGTCGACCTGTCCACCTCTGACAAATTCTGCACATCCAAATCCGTAAATCTTGACAACAACACTAACTGCGTCAAATGTCAAAATTCTGTTATAGCCGCCACATTCTCACTCTTTGACGTCACAAAAAGCAAAGAGTTTGTTCCTTGCGGAATGGCCGCAACTATCGGGATCTGGTCAGACAATAGTCCGACTGTGCCCCAGTTTCGGTCTTACGCAGTGTGTATGTTACAAGTTCTAGAAAACGTCGGTGGGCTCAGCACTGACAATTTAATACCCAATGCAACCATGTCTTACAGTACCAAGCCACCTTCTAAATCTAGATCCATCAAGATTGCCGTTGGATCCGCCTGCGCCGCCCTTTCCTCTGTGGTTGCCATTGTTTTCTTGGTTCTTGCCATCAAAAAAGGTAAACAATTAAAACCGGCTGACGGGACAGATGACGATGAACAATATGCAATGGAGTCGCCGTTGCCAACAGAGGGTCTGTACATATTCACAAAATTGGAACTGAAAAGTGCGACAAACGACTACTCAGACGACTTAGTTCTAGGCGAAGGCGGGGCTGGAAAAGTGTATCTAGGAACACTGCCAAGCGGACAGCAAGTTGCAATCAAAAGAATAAGACTAAAGAAAAAAGTGGCTGAGTTCTATAGAGAAGTGGAGATCCTGTCAAGACTGCGGCACAAGAACCTGACGACATTGGTAGGGTACTGCATAGGGAAAGAAGAGCACGTGCTGGTGTACGAGTACATGGGAGGAGGAAACCTCGCAAGAGCACTGTACGAGGGAAACCTGACATGGCATGAGAGGGTTAGAATAGCAGTGGATGTGGCGGAAGGACTGGTGTACCTGCACGATCTGACGGAGGGGGCGGTGGTGCACAGAGACGTGAAGCCGACAAACGTGCTGCTGACGGATGCGCTGCAGGCGAAGCTGTCGGATTTTGGGGTGTCGAGAGTGATGCCATTGGAGGGAAGCCATGTGTCGACGGAGCTGAGAGGGACGATGGGGTACGTGGACCCGGAGAGCTTTTCGGCTGGCCACGTTTCTGAGTCGGCGGATGTGTACAGTTTCGGGGTGGTGCTGCTGGAACTGGTAACCGGGATGAAGGCCGTGGTGGCCACGCCTTCGGGTGGGGCTGAGTCGATTGTGCATATTGTGCGTGGGGTGGTTGAGGGTGAAGGTAGAGACGACGACTGGGTGTCGGTGGTGGATAGGAAATTGGGGGAGGATCTGGAGAAGGGGCCGGGGTTGGTGAAGCAGGTGTTTGATTTGGGGAGGAAGTGTGTGAGGCCGTATAAGAATGCAAGACCCAAGATGGTGGAGGTGTCAGCGGTGCTGAAAGCCGTGCTGTTGAGCTTGGATACTGGTCTTGATGTCGTGTTGGATGAAGCGATCAAATCGGGGCCCTTGTTTTCCAGTGATGAAAGTAAAGAGCGTTCGTCTGCGTTTAGCGAGTCCAGTCTAAATGTTCCCGTTGAGGCGTGGACTTTATGA

Protein

Gene

>AfisC1G07559
CTCAATTGTTTTTATTTTGGTAAAAATAACATGATTTTTGTTCATATCTTAACAATTTGCATCACACTGTCACTCCCAATCTTAACATACACAGCATGTCCTTACAACTTCTCCAGTGCGATTTCCTTGATCCCCACCGACTGCTACGCCAACTATACCACGCCCTCTGCCACCACCTGCTGCTGGTACGTTTATGCAGCCTATCTCTATTCACTGATCTTATACTCCAACATTTCAAATAGTGCATTCCTACCTTCATCCACAACTGCACAGTGTGCTTCCTCATACGCCTCCCTTCTCTTCTCCAAACATCTAATCCACCCTCAACTTCTCAGCTCTTCTTCCTGCAACATGTCCGGTGATGCCTTGCGTTTTGTTGCTGGTAACAAGCCCTGTCAGTTTCCTACCGTCGACAAAATCAAATCTGCAGTCGACCTGTCCACCTCTGACAAATTCTGCACATCCAAATCCGTAAATCTTGACAACAACACTAACTGCGTCAAATGTCAAAATTCTGTTATAGCCGCCACATTCTCACTCTTTGACGTCACAAAAAGCAAAGAGTTTGTTCCTTGCGGAATGGCCGCAACTATCGGGATCTGGTCAGACAATAGTCCGACTGTGCCCCAGTTTCGGTCTTACGCAGTGTGTATGTTACAAGTTCTAGAAAACGTCGGTGGGCTCAGCACTGACAATTTAATACCCAATGCAACCATGTCTTACAGTACCAAGCCACCTTCTAAATCTAGATCCATCAAGATTGCCGTTGGATCCGCCTGCGCCGCCCTTTCCTCTGTGGTTGCCATTGTTTTCTTGGTTCTTGCCATCAAAAAAGGTAAACAATTAAAACCGGCTGACGGGACAGATGACGATGAACAATATGCAATGGAGTCGCCGTTGCCAACAGAGGGTCTGTACATATTCACAAAATTGGAACTGAAAAGTGCGACAAACGACTACTCAGACGACTTAGTTCTAGGCGAAGGCGGGGCTGGAAAAGTGTATCTAGGAACACTGCCAAGCGGACAGCAAGTTGCAATCAAAAGAATAAGACTAAAGAAAAAAGTGGCTGAGTTCTATAGAGAAGTGGAGATCCTGTCAAGACTGCGGCACAAGAACCTGACGACATTGGTAGGGTACTGCATAGGGAAAGAAGAGCACGTGCTGGTGTACGAGTACATGGGAGGAGGAAACCTCGCAAGAGCACTGTACGAGGGAAACCTGACATGGCATGAGAGGGTTAGAATAGCAGTGGATGTGGCGGAAGGACTGGTGTACCTGCACGATCTGACGGAGGGGGCGGTGGTGCACAGAGACGTGAAGCCGACAAACGTGCTGCTGACGGATGCGCTGCAGGCGAAGCTGTCGGATTTTGGGGTGTCGAGAGTGATGCCATTGGAGGGAAGCCATGTGTCGACGGAGCTGAGAGGGACGATGGGGTACGTGGACCCGGAGAGCTTTTCGGCTGGCCACGTTTCTGAGTCGGCGGATGTGTACAGTTTCGGGGTGGTGCTGCTGGAACTGGTAACCGGGATGAAGGCCGTGGTGGCCACGCCTTCGGGTGGGGCTGAGTCGATTGTGCATATTGTGCGTGGGGTGGTTGAGGGTGAAGGTAGAGACGACGACTGGGTGTCGGTGGTGGATAGGAAATTGGGGGAGGATCTGGAGAAGGGGCCGGGGTTGGTGAAGCAGGTGTTTGATTTGGGGAGGAAGTGTGTGAGGCCGTATAAGAATGCAAGACCCAAGATGGTGGAGGTGTCAGCGGTGCTGAAAGCCGTGCTGTTGAGCTTGGATACTGGTCTTGATGTCGTGTTGGATGAAGCGATCAAATCGGGGCCCTTGTTTTCCAGTGATGAAAGTAAAGAGCGTTCGTCTGCGTTTAGCGAGTCCAGTCTAAATGTTCCCGTTGAGGCGTGGACTTTATGAGATAATGGTTTGATGAAAGTACAGGGGTAGTCGTCGGAATTGTGTGTCTATAGTTCATTCCTGTTTTATTTTTTGGAACATCGTGACCGTATATGATCTGATGATATTCTAGGCAAACTGGGGAAACATTGTTGGCTTAATTATGAAAATGAGCGATGACCATGTACAAGCTTTTTGATATTTGGGCATTCTCTCACTTTTTTGTATAGTCTACTCCAGCCGTCTTCGTTCATTGGAG

Functional annotation

Database	accession number	e-value	annotation
nr	MQM13716.1	1.8e-168	hypothetical protein
Swissprot	O64556.3	2.3e-54	Putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g19230
trEMBL	A0A843WZJ8	1.3e-168	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G19230.1	40.92	5e-58	223		Leucine-rich repeat transmembrane protein kinase protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC1G07559	AT2G19230.1	347	183	10	252	592	521	851	40.92	5e-58	223
AfisC1G07559	AT5G37450.1	364	200	9	235	583	529	878	37.09	1e-56	218
AfisC1G07559	AT4G29450.1	318	163	6	285	584	543	852	40.57	2e-56	217

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	312	574	147.8	3.3e-43

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0004674	F	protein serine/threonine kinase activity
GO:0009311	P	oligosaccharide metabolic process
GO:0009506	C	plasmodesma
GO:0009751	P	response to salicylic acid
GO:0009826	P	unidimensional cell growth
GO:0009992	P	cellular water homeostasis
GO:0019901	F	protein kinase binding
GO:0046777	P	protein autophosphorylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network