result

Gene information

Detail information of AfisC1G07639

Location

Gene	Chr	Start	End	Strand
AfisC1G07639	chr1	1384078684	1384083866	+

Sequences

CDS

>AfisC1G07639
ATGAAGAGGTTGAAGTTTCAGATTGCTTATTTACTTTTGCTGCTCGTTCTTATTGGTCAAAGTTCGAATCTTTATGCTTCTGTTCAGGATGAAGGTAGTTCTTTATTGAAATTTGGAAAAAGAATAGCTTTTGATCCATATGGAGCTATATCAAATTGGAATGAAGAATCCGATTCTCATTGTTCTTGGTTTGGAGTAAAGTGCAATGATCATGGAAGAGTAGAGTCTTTGGACTTAAAAAATCTTCTTCTAGAGGGAACTCTTGCACCTGAACTTGGGAGGCTTTGTCACTTAAAATCTCTCATCTTGTACAATAATTCTTTTTCTGGAACCATCCCAAAAGAGATTGGTGAATTGCAAAAGCTTGAGGTACTGGATTTTGGATATAATAATTTCAGCGGCCCATTTCCCTCAGAAATTAGCAATAATTTGTCCCTAGAGATTATTGTATTAAGAAGTAATCCTCAGATGGGGAACATACAGACTAATGAAGCGCAACCATCCTCGGACCGGTTTGATATCAGAAGGAAAAGCAAGAGTGCAAACATCCGAAGATTTCTTAAAGAAGCCAATTCTAATCCCAAATCCAAAAAATCACCATCGAGCAACAAGAAAAGTAGAAAATTGATAATTATATTGTCAGTGGCAATTGGTGTGGGCTTCATTGTATTAGTGGTTGGCGTCTATTTCATTTGTTGGCGAACAAAAAAAGCAGTGTATACTGTCATGCCTTGGCGAACGGGTCTAAGTGGACAACTGCAGAAAGCATTTGTCACAGGTGTGCCTTCTCTAAAGCGCACAGAGCTCGAATCAGCATGTGAAGATTTTAGCAATGTAGTTGGCTCATTGTCAGACTGCTATTTATATAAAGGAACGTTGTCAAGTGGAATCGAAATTGCAGTAACTTCTAGTATGATTACTTCTGCCAAGGACTGGTCTGATCATTATGAATCTCAGTTCAGGAACAAGATCTCGATGTTGTCCAAAGTGAACCACAAGAATTTTATGAACCTTATTGGGTATTGCGAGGAAGAAGAGCCTTTTACTAGGATGATGGTTTATGAGTATGCACCAAATGGCACACTTTTCGAACATTTACATATTAAAGAAGCCGACCATTTGGATTGGCCTGCACGCTTAAGGATAATAATGGGGATAGCATATTGTATAGACCACATGCACCAACTTGAACCACCTTCCATTCTAAATAATTTGACATCATCCTCCATCTATTTATGCGACGATTATGCTGCCAAAATATCTGATTTGCCCTTCATAAATGGAGAAAAAGGGACTGATGGAGAGTTGTCTTTTGAAAGCTCAAGAGTCCTTGACACCAAATTTTCAACTCTAGAAGGCAATGTGTATAAATTTGGAATTATAATACTAGAAATAGTATCGGGTAGGTTACCTTTTAGCGAAGACGATGGACTACTCGTGCTTTGGGCATCTAGTCATTTAATGGGCAAAAGACCATTAATGAACATGGTCGATTCTACCCTTGAATCTTTTGGTGAAGAAGATGTAATTGCTTTGAGTGAGATAATCAAAATGTGTATTCATAAAGACCCAAAGAGAAGACCGAAAATGTCAGAAGTTGTCTCAAAATTGAGGAAGATTACAAACATGGCACCAACTGCAGCAAGCCCAAAGCTATCTGCTTTGTGGTGGGCAGAGCTTGAGATCATTTCCACAGAGATGAATAGCTTAGAATAA

Protein

Gene

>AfisC1G07639
TGCAAATAACACATAATGGAAAATAATAATAGATAATTTAATGAAAATAAATATAAGGAATAAAGTTTTATCCCATTTAATACTCCACAGAGACTTTGTTCTCAGCTCCGCGTTGATTACATCTTTTCATATTCAATAATCAATCAAACTTTTGCTCTTTTTTGCCTCCTCATATCTTTCTCATCTTTCTTCATACTATTAGAAAGTAATACCCATCCTTTTTTGAGCATAGAAATACCCATTACACGTTTCAATTCTCTACCAAAATTATTATTCTAGTCATCAAAGTAGAGAGACCCATCTAACTTTTTACTGGTTATGAGAAGAAATGAAGAGGTTGAAGTTTCAGATTGCTTATTTACTTTTGCTGCTCGTTCTTATTGGTCAAAGTTCGAATCTTTATGCTTCTGTTCAGGATGAAGGTATGAGCTTTTCAATGTTTCTGACATGGGTTTTTTGTTTCATGAATTTTTTTTCCTTCTTACTTTGCAATGACAATTTATAATTTTTATGTGAATTCAGGTAGTTCTTTATTGAAATTTGGAAAAAGAATAGCTTTTGATCCATATGGAGCTATATCAAATTGGAATGAAGAATCCGATTCTCATTGTTCTTGGTTTGGAGTAAAGTGCAATGATCATGGAAGAGTAGAGTCTTTGTAAGCTAATCTAAATTAAATTTGTTATTATTGTTTTGTTATGATTTTGCGATTATGTGTATTTGATTATGTTTGTTATTATTGTTTTGTTATGATTTTGCGATTATGTGTGCTTGATGATGTGTAGTTCTCTTCCTGGAATATCAACATCATCCTACAGACTTCGGCGAAACTTGTGGTCAATAATTTGTAATGCAATAAATGTGGCTGTATAATTATTTAATAACGCTAATTTTTTTGTTCTTTTCGATCTGCACCACTTGCATCAAGTAGTTGATATTTTGGCGTACGAGTTGATTTTTCTAAGATAAGGAACACGACAAATATTCATATATAGCTAGTTCCATACGGAGTTGTGCTGGTGGCTATAATATGAGTTAGTGATGGGTAGTTAATATTTTGCTAGTATATGTGAACTTGCTCTAAATTCAAACTGTCGGTAGGAATGGCATGTAAATCATCAAATTAATGTGACTAATTTTTTGAGTTTTAACTAAATTTTCTTACATCCATGTGTATTGTATTTCTCATGAAAATTTATCTTCATAATGGACTCGTTTGTTGATTAATCTCACAAGAGGGGGACGCTTGCTGATGTTATATATTCTGCAGGGACTTAAAAAATCTTCTTCTAGAGGGAACTCTTGCACCTGAACTTGGGAGGCTTTGTCACTTAAAATCTCTGTAAGTTCTATCTTACTTTACGCCTTTGCGTTAATCATATTCAAATAACAATGTTAATACTATGTCTATAGTCTAATCATGTTTATATCTTTCTTTTACTTAATTTATACAACTATAATGTTATATGTTTGCATGTCATTTTTTTTTTATGTTTTACAGTATTCAAATTATTTATAATAGCACATTGGCCTGTATGTGCTTGCTTACATATCAAATATCCTCCAAAATATTTGCATACCCAAACCATGCTAGTACCCTCTGTGAGTGGAGTTTGGCCAAAAATTTGTTGATGGTTAAAATTGTATTGACAATTAACATTGGGAAGTTTTGGTTATAGTGTAGAGATGTTTGTATGTATTTATATGTTGATAATGATGCAGTAAACATTTATTCAAAACTTCTAATGATGGTTTTTAGCATTGTTTTGGCATTTGTGTATGGATTTATCTATATGTAGATAGTGATACACTGAACATTTACTCAAAACTTCTATTGATTATTTCTAAGCAGTCTTTTGGAATTTGATTTTGCAGCATCTTGTACAATAATTCTTTTTCTGGAACCATCCCAAAAGAGATTGGTGAATTGCAAAAGCTTGAGGTACTGGATTTTGGATATAATAATTTCAGCGGCCCATTTCCCTCAGAAATTAGCAATAATTTGTCCCTAGAGATTATGTGAGTAGGAATCACTATATAATTTGAATTATACCTTATAACAATTCTGATATGACATTATATTTTAGTGTATTAAGAAGTAATCCTCAGATGGGGAACATACAGACTAATGAAGCGCAACCATCCTCGGACCGGTTTGATATCAGAAGGTAAAGCTGATAATATTGTCTATTCTCTTAGTAAAATATACGTGGCTTAAATATGAGCATTTAATTCTTTGGAAAGTGCAAAAACTAGAACATGAGTTCGTATACGCATTAAGAATAAAGTTCTCAAAATTTTTCAAAAGTTGAGCTCGTCATTCTTTTCAATTTAAACTGTTTTTTCTCGACTATGATAAGTTTTTTGATAAGAAGTTAAATGTTCTGTACATAAGTTGAGCATGCATAACATTTCTTATGATAACAATTTCTTTTTATAAATGTTATATATTTAACTTTTATAGCATTACTGTATCTTAGCATCATCTACTTGTTTCTTAATTATCTTTGTTGCACATCTCTCATGTGAATCATATATATGACCTTTTCCAGTTGCTTAACTGATACAAATTTATTTATATACTTCATTTCATGGTCTTTATATCGATAAAATCTACCAAAAATGATGACTTGGATATTGACACAGCGACCCCAACACTAGAAAATACTTTAGCACAGCAGCTTTTAGAAAAAACAGTATCATATGATATAACTTCCTAAACAAAATTTTGTAATTTCACAACAGGAAAAGCAAGAGTGCAAACATCCGAAGATTTCTTAAAGAAGCCAATTCTAATCCCAAATCCAAAAAATCACCATCGAGCAACAAGAAAAGTAGAAAATTGATAATTATATTGTCAGTGGCAATTGGTGTGGGCTTCATTGTATTAGTGGTTGGCGTCTATTTCATTTGTTGGCGAACAAAAAAAGCAGTGTATACTGTCATGCCTTGGCGAACGGGTCTAAGTGGACAACTGCAGAAAGCATTTGTCACAGGTTCGTAGCCTTTTTGGCCTTTCTATCCATGACACCGTTCCTTATGCAGTAGTATTCTAGCTGTTAAGTTATGATAATTATTAGCTTTCTCAGTTTTGTAAATATGAGGAGCAGTAAACTTTTTGAACTATAATAGGAACACGGCGTCATATATTTTTGTTCTGAGATATGTGCAAAATGTTAGGCACTCATAGATTATACACTCTTAAGAATGTGATTAATCAATGACACAATATTGTCACAAATTCTACATTTCAATCGATGGTAGCTTACATTTTTGTGTTTTCTGTAATGCATGCATCACTGATTAGGTGTTATGACCACAATAACTTTACATTGATTGTTTAATGTCATTGTTTATCATTATTGAATGACAGGTGTGCCTTCTCTAAAGCGCACAGAGCTCGAATCAGCATGTGAAGATTTTAGCAATGTAGTTGGCTCATTGTCAGACTGCTATTTATATAAAGGAACGTTGTCAAGTGGAATCGAAATTGCAGTAACTTCTAGTATGATTACTTCTGCCAAGGACTGGTCTGATCATTATGAATCTCAGTTCAGGAACAAGGTGACTTATTAATGGCATGTTGTATATGAATTTAGGCCTGTGATAAATAACTGCGATTTATTATATGTAAACTTATGACTATGTTTCAGATCTCGATGTTGTCCAAAGTGAACCACAAGAATTTTATGAACCTTATTGGGTATTGCGAGGAAGAAGAGCCTTTTACTAGGATGATGGTTTATGAGTATGCACCAAATGGCACACTTTTCGAACATTTACATAGTAAGTAAATCCTTCATTTAGGTGATTATATTTTTCGACTGTAAAGACCCACTTCGGCAAACATGCAATGTATATGAAATGTTATATATTCATCAATCTAGATGATGTGGAACTTTACATAGAATGATATGGTTTTGATTTTGGATTAGGTCATTGTTTTGGTAGTAAAAACATCCAGATCAATCAGGTTTGGTATAAGTAATTTGGTTCATTAAATTCAAGTGGCTGTCATACTTTTATCTTGCCGTTCAACACAAAATTCAACGGAGTACTTCATAAAGTGTTTTTATATTTTGAGTTTTTACTACAATAGGAAATAATAATCTTTTATCTTTTGAGATTTTCCCATAACAATCAATTTTTATAACTGAAATTGAAGTTGGTGTACCTAATCATTTGATTTTTTCATAAATGTCAACCTATTGCAAAACTCATAAGTTTTAGGTAGAAAATTTCAGTATCAGCATAATATATTTTAAAACATATGTTCGAATAGTTTGTTGCATCTTACTTAACCTTGAATCCCTTTAATATTTCTAGTTAAAGAAGCCGACCATTTGGATTGGCCTGCACGCTTAAGGATAATAATGGGGATAGCATATTGTATAGACCACATGCACCAACTTGAACCACCTTCCATTCTAAATAATTTGACATCATCCTCCATCTATTTATGCGACGATTATGCTGCCAAAATATCTGATTTGCCCTTCATAAATGGAGAAAAAGGGACTGATGGAGAGTTGTCTTTTGAAAGCTCAAGAGTCCTTGACACCAAATTTTCAACTCTAGAAGGCAATGTGTATAAATTTGGAATTATAATACTAGAAATAGTATCGGGTAGGTTACCTTTTAGCGAAGACGATGGACTACTCGTGCTTTGGGCATCTAGTCATTTAATGGGCAAAAGACCATTAATGAACATGGTCGATTCTACCCTTGAATCTTTTGGTGAAGAAGATGTAATTGCTTTGAGTGAGATAATCAAAATGTGTATTCATAAAGACCCAAAGAGAAGACCGAAAATGTCAGAAGTTGTCTCAAAATTGAGGAAGATTACAAACATGGCACCAACTGCAGCAAGCCCAAAGCTATCTGCTTTGTGGTGGGCAGAGCTTGAGATCATTTCCACAGAGATGAATAGCTTAGAATAAATTGCCTGGAAAATGTTCATAAATAAAATTCATCTATGTTCCATTTTTTTTTACCTGTTTCAGTTCATGTTTGTATTGCTATAAAGATGTGCATATTGGTTACTAAATTATGTGAGGCAAGCTTGTGATTGTTTTGCTTTGTAGGTAGTAAAAGAAAATGCTCTAAAGTATTCCAGGAGAAATATATTTTGTATTAATTTTGTGTTATTTATATCATATTGTTTTATGCAACTAAGAGTTTTG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020241117.1	7.2e-172	inactive receptor-like serine/threonine-protein kinase At2g40270
Swissprot	C0LGQ4.1	2.4e-103	Protein MORPHOGENESIS OF ROOT HAIR 1
trEMBL	A0A5P1FFC4	8.3e-162	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G07150.1	45.12	1e-118	423		Leucine-rich repeat protein kinase family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC1G07639	AT5G07150.1	563	238	15	31	567	36	553	45.12	1e-118	423
AfisC1G07639	AT4G18640.1	677	284	17	13	566	11	676	38.26	8e-118	421
AfisC1G07639	AT2G40270.2	376	154	8	199	565	120	481	52.93	5e-108	388

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF08263.9	LRRNT_2	Family	29	69	35.4	8.5e-09
PF07714.14	Pkinase_Tyr	Domain	309	537	71.5	6.1e-20

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0005515	F	protein binding
GO:0003006	P	developmental process involved in reproduction
GO:0003677	F	DNA binding
GO:0003723	F	RNA binding
GO:0006952	P	defense response
GO:0005576	C	extracellular region
GO:0004675	F	transmembrane receptor protein serine/threonine kinase activity
GO:0007169	P	transmembrane receptor protein tyrosine kinase signaling pathway
GO:0005524	F	ATP binding
GO:0016491	F	oxidoreductase activity
GO:0006468	P	protein phosphorylation
GO:0006970	P	response to osmotic stress
GO:0006996	P	organelle organization
GO:0007623	P	circadian rhythm
GO:0010038	P	response to metal ion
GO:0009507	C	chloroplast
GO:0009742	P	brassinosteroid mediated signaling pathway
GO:0010467	P	gene expression
GO:0012505	C	endomembrane system
GO:0016070	P	RNA metabolic process
GO:0044249	P	cellular biosynthetic process
GO:0044711	P	single-organism biosynthetic process
GO:0048765	P	root hair cell differentiation
GO:0090406	C	pollen tube
GO:1901576	P	organic substance biosynthetic process

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network