result

Gene information

Detail information of AfisC1G07724

Location

Gene	Chr	Start	End	Strand
AfisC1G07724	chr1	1398481062	1398485558	-

Sequences

CDS

>AfisC1G07724
ATGGGAATCCTCAAGGTTATTTTTCTCATAACACTACTCACATCCTTCAATTCAGTGGTATGGAGCGAAACAGATCCTAATGATTTGGCCATCATTCAAGAATTTCTCAAAGGACTAGAAAATCCCGAAGATCTCAAGTGGTCATCCAATAGCAATGATCCATGTGGTGATAAATGGCCTTATATCTATTGCGATGGTGCTCGTATAACCCAGATTCAGACCAAAAATCTAAATTTGCGTGGCACTCTTCCTCAAAACTTCAACAAGCTCACCGAACTTATGAACATAGGAATTCAAAATAATGAACTTTCGGGTAGTCTTCCTTCATTTTCTGGCCTCTCTAAGCTTCAATATGCCTACTTAGGCAACAATAAGTTCGATACAATACCCTCTGATTTCTTCAATGGGCTTGAAAGTTTACAATCCATGTCATTACAGAACAACCCTTTAAATAAGAGCAATGGTTGGGCACTGCCTTCTGAATTGAAAGACTCAGCCCAACTAGTTAACTTAACCCTATCAAATTGCAATCTTAAGGGCACATTGCCTGATTTCTTGGGTTCTTTAAGCTCTTTGATGATGCTTGATTTGTCTTACAACAACTTATCTGGCACAATTCCAGAAAGCTATTCTGCACTGCAGCTACAAGTACTGAAGCTTAACAATCAAGATGGATCCGGGTTAAGTGGCCCGATAGATGTCATTGCTTCTATGTCACAGTTAACTCTACTTTGGCTTCATGGAAACTCATTTACGGGTCCGATTCCTACTGCTATCGGGTCTTGTTTTTCTCTGCGAGAAGCATGGCTTAACAATAATCACTTTGTTGGACTTGTTCCTAACAATTTGACATTGCTTCCTCAACTAGAATCATTGAGGATAGGAAATAACCTGTTAATGGGTCCAATACCAAAAGTTACCTTCGCCAACTTCACTTACAATTCCAATTCTTTCTGCCAATCGACGCCTGGTTTGCCTTGCTCGCCTGAAATCACAGCTTTATTGAACTTTCTTGAAAGCGTGAACTACCCTAATAATCTTGTGAACAATTGGATAGGAAATGATCCATGTTCATTTTTTGGAGTTTCTTGCATAAGTAACAAGGTTGCACGGATCAATCTTCAAAATCTCAAGTTGAATGGCACGATTAGCCCTTCACTCGGGTCATTGAATTCTCTAACAGAGATTTTTCTTGGTGGAAACAATTTAGTAGGTACATTACCAAATGACTTGTTGAGTTTGCCATTGTTGAAAGTGTTAAATATCTCCGATAATGATCTTTCACCTCCTTTACCAAAATTCAGTAATAATGTGAAACTGTTATATGTTGGAAATCCGAAACTGGACCCTAATGCACCTCCAAAACCACCAGTTGCAGGCCCTCATGCTACATTGCCTACTGAAGATGGGTTCAGTCCAAACAATGCACCAAAAAAAGCAAGAAGATCGAAACTCCATGTTATGATTGTGCCTATAACGATAGGTTTGTTTTTACTTGTTTTACTTGCATTCTTATATGCATGTAGTCATATAAGAGCAAGAAAAGGAACACATCCATCCCCAAATTCAGTTGTCATCAGACAAGGAGACTCGTCTGACTCTGAAGATTTGGTTAAAATTGTTGTCGAAAACAGTAACGGCAATGGTCGCGTGAATACTAGTAATGATACGACCAATACTTATGCAATAGAGTCTGGCAATTTGGTAGTATCGGTTCAAATTCTAAGAAATGTAACAAAGAACTTTTCAAAAGAGCAAGAACTTGGACGTGGAGGATTTGGTGTTGTTTACAAAGGAGAGCTACATGATGGAACTATAATAGCTGTTAAAAGAATGGAGTCAGGTGTGCTTAGCACTAAAGGATTTGATGAGTTCCAGGCTGAAATTACCGTTTTATCCAAGGTAAAGCACCGTAATTTGGTGTCCTTGTTAGGGTTTTCAGCTGAAGGTAATGAGAAGCTTTTGGTGTACGAGTACATGCCTAAAGGAACATTGAGTAGACATTTATTTGACTGGAAAGAACTCGATTTGGATCCTTTGTCATGGAAGAGGAGACTGAATATATCATTAGATGTTGCTCGAGCGATGGAATATCTGCATAGCCTTGCACACCAATCATTTATTCATAGAGATTTGAAATCATCAAATATACTTCTCGACGATGATTATAGAGCAAAAGTTTCAGATTTCGGGCTTGTTAAACTTGCTCCTGATGGGAAGTACTCAGTTGCAACTAAACTTGCTGGGACTTTTGGTTATCTTGCTCCTGAATATGCTGTGACTGGAAAAGTATCAACAAAGGTCGATGTCTTCAGTTTTGGGGTAGTTCTAATAGAACTATTAACGGGTATGACTGCACTTGACGAACACAGACCCGAAGAAACCCAACACCTGGCCTCTTGGTTCCACAGTGTAAAGTTCAACAAAGACAGACTCAGAAATTACATAGACAAAACACTTGACGCATCAGATGAAACATTTGAGGAAATATGCATAGTTGCTGAACTGGCAGGTCACTGCACTGCAAGAGAACCCCATCAAAGACCCGAAATGGGTCATGCAGTCGGAGTCTTAGCTCCATTAGTCGAGAAATGGAAACCCGTCAAGGATGACTCAGATGAAAGTTTGGGCATCGATTTAGGACAGCCTCTCCTACAAATGGTAAAAGGATGGCAGTTAGCGGATAACGGGTCCAATTCATGCTCAATGAATCTTGACGATAGTAAAGGAAGTATTCCTTCTAGGCCCGTTGGGTTTGCAGAGTCATTTACTTCCTCAGATGGTCGATAA

Protein

Gene

>AfisC1G07724
CTGAATCGTTTTTCTCTCCCAACATTTTTCCTTCTTTTCGGAAGTCCTCTTCTGCAACTGCCAGTGCATAATGGTCCTGATTTACAAGGTAAATCCTAATTCCTAGTTCTGTCTAAAATTATAATGTCATGAACTTGACGACCTAGGTCTGTTAATACTTCAAAAATGTTTGTAGGTTTGTTTCAGTTGATACCATTTGACCTGATTTTTATAATGCTTGTACATTTTAATGGCGTTTTCAGTTCTAGAAGTTTGAGTAGCGAAGAAAGCTCTCTCCTTTTTTGATTTAAAGTCGATTACGTAGATTCTGAAGCTTTGGGTTTTGGTTTAAAATGCTTTATTTGAGGTGGATTGCTCTATAGTAAAGATGTAAACTAGCTTTTGCCTTTGATTGTGGTGTGGCTAGATATTGGTTTTTTTTTTCCTGATTTTTTGTTTTAGAGATGACTCTGTTCTAAAATGTTCTAGATATTATAAATTTAATTTTTTTATTTTTTAAATACCTTTTTGTTTTCCCCCTGTTCTGGACACTTTGCGTGATTTGAGTAACTTCTGTTGTAATTGTAACGAAGAATCTTTATTCATAAGTCTGCTACTTTGGAAATGTTATCTTAAGAAGCTTATAATTAAGTCGAGTCAAAATAACATCTTTGAGTTTAAAGCAAAGCTGGTATGTTGAAATGACCTTATCTTCTTCCTCATCTTTTGTTCTATATGTCTAATAAAGACATTGTAAGATATTGCTATGTTTGACTGTCAGATTTAGCTTTTTTAGCATGCTTAGATGTTTCGGTGAGCACCGTTTTCTTCCTAAGCTTCTTCTTATTTTACCTCAGTTTGTCAATCAGACCTTAAATTTGATTAAAGTGAAATATATTAAGTAACAAATAATTTTTATTTCCAATGCAGGCAGTTTTTTGGAGAACATAATATCTCTACTAAGTTTAGCTAATCATGGGAATCCTCAAGGTTATTTTTCTCATAACACTACTCACATCCTTCAATTCAGTGGTATGGAGCGAAACAGATCCTAATGATTTGGCCATCATTCAAGAATTTCTCAAAGGACTAGAAAATCCCGAAGATCTCAAGTGGTCATCCAATAGCAATGATCCATGTGGTGATAAATGGCCTTATATCTATTGCGATGGTGCTCGTATAACCCAGATTCAGACCAAAAATCTAAATTTGCGTGGCACTCTTCCTCAAAACTTCAACAAGCTCACCGAACTTATGAACATAGGAATTCAAAATAATGAACTTTCGGGTAGTCTTCCTTCATTTTCTGGCCTCTCTAAGCTTCAATATGCCTACTTAGGCAACAATAAGTTCGATACAATACCCTCTGATTTCTTCAATGGGCTTGAAAGTTTACAATCCATGTCATTACAGAACAACCCTTTAAATAAGAGCAATGGTTGGGCACTGCCTTCTGAATTGAAAGACTCAGCCCAACTAGTTAACTTAACCCTATCAAATTGCAATCTTAAGGGCACATTGCCTGATTTCTTGGGTTCTTTAAGCTCTTTGATGATGCTTGATTTGTCTTACAACAACTTATCTGGCACAATTCCAGAAAGCTATTCTGCACTGCAGCTACAAGTACTGAAGCTTAACAATCAAGATGGATCCGGGTTAAGTGGCCCGATAGATGTCATTGCTTCTATGTCACAGTTAACTCTACTTTGGCTTCATGGAAACTCATTTACGGGTCCGATTCCTACTGCTATCGGGTCTTGTTTTTCTCTGCGAGAAGCATGGCTTAACAATAATCACTTTGTTGGACTTGTTCCTAACAATTTGACATTGCTTCCTCAACTAGAATCATTGAGGATAGGAAATAACCTGTTAATGGGTCCAATACCAAAAGTTACCTTCGCCAACTTCACTTACAATTCCAATTCTTTCTGCCAATCGACGCCTGGTTTGCCTTGCTCGCCTGAAATCACAGCTTTATTGAACTTTCTTGAAAGCGTGAACTACCCTAATAATCTTGTGAACAATTGGATAGGAAATGATCCATGTTCATTTTTTGGAGTTTCTTGCATAAGTAACAAGGTTGCACGGATCAATCTTCAAAATCTCAAGTTGAATGGCACGATTAGCCCTTCACTCGGGTCATTGAATTCTCTAACAGAGATTTTTCTTGGTGGAAACAATTTAGTAGGTACATTACCAAATGACTTGTTGAGTTTGCCATTGTTGAAAGTGTTAAATATCTCCGATAATGATCTTTCACCTCCTTTACCAAAATTCAGTAATAATGTGAAACTGTTATATGTTGGAAATCCGAAACTGGACCCTAATGCACCTCCAAAACCACCAGTTGCAGGCCCTCATGCTACATTGCCTACTGAAGATGGGTTCAGTCCAAACAATGCACCAAAAAAAGCAAGAAGATCGAAACTCCATGTTATGATTGTGCCTATAACGATAGGTTTGTTTTTACTTGTTTTACTTGCATTCTTATATGCATGTAGTCATATAAGAGCAAGAAAAGGAACACATCCATCCCCAAATTCAGTTGTCATCAGACAAGGAGACTCGTCTGACTCTGAAGATTTGGTTAAAATTGTTGTCGAAAACAGTAACGGCAATGGTCGCGTGAATACTAGTAATGATACGACCAATACTTATGCAATAGAGTCTGGCAATTTGGTAGTATCGGTTCAAATTCTAAGAAATGTAACAAAGAACTTTTCAAAAGAGCAAGAACTTGGACGTGGAGGATTTGGTGTTGTTTACAAAGGAGAGCTACATGATGGAACTATAATAGCTGTTAAAAGAATGGAGTCAGGTGTGCTTAGCACTAAAGGATTTGATGAGTTCCAGGCTGAAATTACCGTTTTATCCAAGGTAAAGCACCGTAATTTGGTGTCCTTGTTAGGGTTTTCAGCTGAAGGTAATGAGAAGCTTTTGGTGTACGAGTACATGCCTAAAGGAACATTGAGTAGACATTTATTTGACTGGAAAGAACTCGATTTGGATCCTTTGTCATGGAAGAGGAGACTGAATATATCATTAGATGTTGCTCGAGCGATGGAATATCTGCATAGCCTTGCACACCAATCATTTATTCATAGAGATTTGAAATCATCAAATATACTTCTCGACGATGATTATAGAGCAAAAGTTTCAGATTTCGGGCTTGTTAAACTTGCTCCTGATGGGAAGTACTCAGTTGCAACTAAACTTGCTGGGACTTTTGGTTATCTTGCTCCTGAATATGCTGGTATTCCACTATCTTTTCCCAATTCATGCATTTCATTCATTATTTTCCAATACATGAATATGATGGTATTATGGCATTTTAATTGTATAAAATAGTATAGTTTTGCTATTTTCAGCATAAATTCTAGTGGATAATTATATGAATTACACATTAGTCATAAACTTAAATGGTAAAGAACACATGTTAACCTCCAAATGGTAGCCCATTTAGCCAATACACAAAAATGCAAATGAAGATGTACGATCTAATTTCAATGGACATCAAATCTCTTTTGCTATTTACAAAGAATATGTGGTGAATATGTGCCGTAGGGTTGATGCATATTTTCTTGAATTTATAGACAGTGTTCAATTTATCTGGATATATTAGAAAAACCCACATTTGAATTTGCCTCCAAGGATGGTCAAGTAGTTGAGCATTAAGTTGAAATGTAAGAAATGTATAGTTCAAATTATTAACTAAATTTACAACCCGTGTGCACAGACACTTTAATTGTATACGATGCCATGACACATTACTCGCAGTTTAATTATTTAGATCGCACATTTTCCTTTTATAGTGATGAAATTTTCCTTTTATGACCCAGTGACTGGAAAAGTATCAACAAAGGTCGATGTCTTCAGTTTTGGGGTAGTTCTAATAGAACTATTAACGGGTATGACTGCACTTGACGAACACAGACCCGAAGAAACCCAACACCTGGCCTCTTGGTTCCACAGTGTAAAGTTCAACAAAGACAGACTCAGAAATTACATAGACAAAACACTTGACGCATCAGATGAAACATTTGAGGAAATATGCATAGTTGCTGAACTGGCAGGTCACTGCACTGCAAGAGAACCCCATCAAAGACCCGAAATGGGTCATGCAGTCGGAGTCTTAGCTCCATTAGTCGAGAAATGGAAACCCGTCAAGGATGACTCAGATGAAAGTTTGGGCATCGATTTAGGACAGCCTCTCCTACAAATGGTAAAAGGATGGCAGTTAGCGGATAACGGGTCCAATTCATGCTCAATGAATCTTGACGATAGTAAAGGAAGTATTCCTTCTAGGCCCGTTGGGTTTGCAGAGTCATTTACTTCCTCAGATGGTCGATAATTTGTTATTAAGTTGTATCTTTGTTTGATTTCTTGTAGATAGCAGTTTTCATGCATGACATGTATGGTTTGTTTTTATGTTTATTTTGAATTTGATGGTTTATTGTAAGTTATCGAGCAACATACATATCTCTTTATCATTTTGAAGTTAGAAATCTTTGCTTTTCA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020260416.1	2.7e-301	receptor-like kinase TMK3
Swissprot	Q9SIT1.1	1.7e-162	Transmembrane kinase 3
trEMBL	A0A5P1F0T4	1.9e-301	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G01820.1	46.32	0.0	784		Leucine-rich repeat protein kinase family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	bit score
AfisC1G07724	AT2G01820.1	950	469	19	6	929	9	943	46.32	784
AfisC1G07724	AT1G66150.1	928	458	16	28	929	28	942	46.44	777
AfisC1G07724	AT3G23750.1	930	455	16	29	929	31	928	44.52	728

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF08263.9	LRRNT_2	Family	27	65	15.2	0.017
PF13855.3	LRR_8	Repeat	92	150	28.3	1e-06
PF13855.3	LRR_8	Repeat	167	222	27.3	2.1e-06
PF08263.9	LRRNT_2	Family	329	364	26.5	5.2e-06
PF00069.22	Pkinase	Domain	582	854	159.1	1.2e-46

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0004675	F	transmembrane receptor protein serine/threonine kinase activity
GO:0005794	C	Golgi apparatus
GO:0040007	P	growth
GO:0009505	C	plant-type cell wall
GO:0009506	C	plasmodesma
GO:0009555	P	pollen development
GO:0009941	C	chloroplast envelope
GO:0019901	F	protein kinase binding
GO:1900459	P	positive regulation of brassinosteroid mediated signaling pathway

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K00924	E2.7.1.-; kinase	EC:2.7.1.-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network