result

Gene information

Detail information of AfisC1G08105

Location

Gene	Chr	Start	End	Strand
AfisC1G08105	chr1	1482359818	1482364429	+

Sequences

CDS

>AfisC1G08105
ATGAACGCCAAACCAACCACCCTAAATATAGCCTCAACAAATAAAAACAACAATTTTTATTATTTTTCTAGAAATAAAAATAAAAATACCCTCCTAAACAGTCACAATCAACAACCTTCAGAAATCAAAAGAGAGGGAGGAGCACGGGGAATGGGAGGCTGCTACTCCACCCCTTCCTCCATCCTCTCGGAAACCTCAAAATCACGGCGCTGCCTCCCATCCCTGACCAACTCCGACTCATACTACTCTGACCATGAAGCCACCACCCTAGTTCCTCCGTTCAACCCCTTCGTCCTTCGCAACCCTTCCTCCTCTGAAGAGTTCGTTCGTCGGTACAGGCTCGGCAAGGAGCTAGGTCGCGGCGAGTTCGGAGTCACACGGCGGTGCGTGGACGTTGAGACCGGGGAGGTGTTCGCGTGCAAGACCATATCCAAGAGGCGGCTGAAGAACAGCGTGGACGCCGCCGACGTTAGAAGGGAGGTCGAGATCATGAGATGTTTGCCCGACAATGAAAACATAGTGAAGTTGAAGGACGCTTACGAGGACCGTGAGGCCGTGCATTTGGTCATGGAGATATGCGAGGGTGGGGAGTTGTTCGATAGGATCGTAGCAAGAGGGCATTACACTGAACGGGCTGCCGCTAAGGTTGCCAAGACCATCATCGAGATTGTTCAGCTATGCCATAAGCATGGAGTAATTCACAGAGACCTCAAGCCGGAAAACTTCCTGTTTGCAAACGAATCAGAGACTGCTCCTCTCAAAGCTATCGATTTCGGTCTGTCTGTGTTCTTCGAGCCTGGCGAGAGGTTCAACGAGGTTGTTGGAAGTCCATATTACATGGCGCCTGAAGTTCTGAAAAGAAATTATGGACCTGAAGTAGATGTATGGAGTGCTGGGGTGATTTTATACATATTGTTGTGTGGTGTTCCTCCATTTTGGGCAGAAACCGATGAGGGAATTGCACAGGCAATTGTTAGGTCAGAAATTGATTTTGAGAGGGAGCCATGGCCTAAGGTGTCAGAGAATGCGAAGGATCTTGTGAAACACATGCTTGATCCAAACCCTTTTACAAGGCTAACAGCTAAAGAAGTTCTTGAACATCCATGGATGCAAAATGCAAATACAGCTCCAAACATTCCACTTGGAGAAACAGTAAGATGCAGGCTGAAACAGTTCTCAGTAATGAACAAGTTCAAGAAGAAAGCATTGCGAGTTGTAGCCGAGCATTTACCTGTAGAAGAAATAGCAGGATTCAAGGAGATGTTTCATATGATGGACAAAGATAAAAATGGAAATTTAACGCTTGAGGAACTCAAAGAGGGATTGCAAAATATGGGATCACCTGTAGCAGAACCTGATGTTCAGATGTTAATGGAAGCAGCAGATGTTGATGGGAATGGTACACTAGACTGCGATGAATTTGTTACTGTATCAATTCACCTCAAAAAGATAAACAGTGAAGAGCATTTGTCAAAAGCTTTTAGATATTTTGATAAAGATGGGAATGGTTATATCGATATCCATGAACTGAGAGAAGCTTTGGCAGAGGGAGATCTTGGTCCTAATGAACAATTAATTAATGATATTATTTCTGATGTGGATGTTGATAAGGATGGTCGAATTAGTTATCCCGAATTTCAAATGATGATGGAAGCAGGAGTTGATTGGAAAAACACCTCACGCCAATACTCACGGGTTGTGTTTAACAACCTTAGTCACCGCATGTTTACAGTTGGATCTTAG

Protein

Gene

>AfisC1G08105
CAAAACATTGATAGCACAGGAGCTAAACCAGGAGAAATGAACGCCAAACCAACCACCCTAAATATAGCCTCAACAAATAAAAACAACAATTTTTATTATTTTTCTAGAAATAAAAATAAAAATACCCTCCTAAACAGTCACAATCAACAACCTTCAGAAATCAAAAGAGAGGGAGGAGCACGGGGAATGGGAGGCTGCTACTCCACCCCTTCCTCCATCCTCTCGGAAACCTCAAAATCACGGCGCTGCCTCCCATCCCTGACCAACTCCGACTCATACTACTCTGACCATGAAGCCACCACCCTAGTTCCTCCGTTCAACCCCTTCGTCCTTCGCAACCCTTCCTCCTCTGAAGAGTTCGTTCGTCGGTACAGGCTCGGCAAGGAGCTAGGTCGCGGCGAGTTCGGAGTCACACGGCGGTGCGTGGACGTTGAGACCGGGGAGGTGTTCGCGTGCAAGACCATATCCAAGAGGCGGCTGAAGAACAGCGTGGACGCCGCCGACGTTAGAAGGGAGGTCGAGATCATGAGATGTTTGCCCGACAATGAAAACATAGTGAAGTTGAAGGACGCTTACGAGGACCGTGAGGCCGTGCATTTGGTCATGGAGATATGCGAGGGTGGGGAGTTGTTCGATAGGATCGTAGCAAGAGGGCATTACACTGAACGGGCTGCCGCTAAGGTTGCCAAGACCATCATCGAGATTGTTCAGGTGATGTACCGATAAATCCGACACCGTCTGTTAACTTCTGAAAAAGTATCCAATGCATTAATGAAAATAGGAATGCTTTGCTACTCTTGGAGCCATCACATCGTAAAATGCACCAAATCTATCTTTTAACTCCGGTATATTGCTAAAAGCACTCAGGTTTGCACTTCCCAATAACATGATATGGTATTAGGAAGTGCAAGACCTACTGCATTTACCTCCATATGGTAGTGTGATGCTAAAAGCACCAACTTTTGCACTTTCTGTTGTCACGTCATGGTAGTAGTCTAGTAGATAGTGTAAACTTAGGTGCTTACTAACTATAAGAGTACTAGAGCATCCATTCCCCAGTAATAAATCAGAGTAAGCGATCCAAATTCATTATTTTTGTTGTTGAATTATCATCTAAATGCTTTGACCAGATGAGCAGCCATTACGAGACAATACTTTCAGGTTTTTTTCACTAACAACAGGTTTTTTCCATTGTTTTCAAATGGTGCAGCTATGCCATAAGCATGGAGTAATTCACAGAGACCTCAAGCCGGAAAACTTCCTGTTTGCAAACGAATCAGAGACTGCTCCTCTCAAAGCTATCGATTTCGGTCTGTCTGTGTTCTTCGAGCCTGGTGAGTAAAGAATGAAACTTTTAAGGGCCGGCATTCATCTGGATGTGCTTGATAGTTGATACTAGTTTACAGTCTTTTCTGTGAAATTTTGATTCAGGCGAGAGGTTCAACGAGGTTGTTGGAAGTCCATATTACATGGCGCCTGAAGTTCTGAAAAGAAATTATGGACCTGAAGTAGATGTATGGAGTGCTGGGGTGATTTTATACATATTGTTGTGTGGTGTTCCTCCATTTTGGGCAGGTAATCTTAAATGTTACTGGTTAATCATTAGTAACATGCTTGTGATGGAAGGAGATATTGTTTTAAATTGCAGAAACCGATGAGGGAATTGCACAGGCAATTGTTAGGTCAGAAATTGATTTTGAGAGGGAGCCATGGCCTAAGGTGTCAGAGAATGCGAAGGATCTTGTGAAACACATGCTTGATCCAAACCCTTTTACAAGGCTAACAGCTAAAGAAGTTCTTGGTGAGTTCATCTTCATGTTTATGTCAAAAGTCGAAGCCTGAAACTAACAGCTGCTCTTTTATATGAAGAACATCCATGGATGCAAAATGCAAATACAGCTCCAAACATTCCACTTGGAGAAACAGTAAGATGCAGGCTGAAACAGTTCTCAGTAATGAACAAGTTCAAGAAGAAAGCATTGCGAGTAATTAGCTCTGAACCTTTGACGGCTTTATGAAAGACTGGAGCCTTATAATCGAAAAGCTGATATATGCTCTTGTATAGGTTGTAGCCGAGCATTTACCTGTAGAAGAAATAGCAGGATTCAAGGAGATGTTTCATATGATGGACAAAGATAAAAATGGAAATTTAACGCTTGAGGAACTCAAAGAGGGATTGCAAAATATGGGATCACCTGTAGCAGAACCTGATGTTCAGATGTTAATGGAAGCAGTAAGTGCCACTAGCCGTCCTGCCTCTGTTGATGGTCAATATAATTTCTCTGATAATGCAGGAAACACACTTCAGTTACAAATTGCATTTTAATTCCACTTCTGTACAACATCAGATCAGGATAGTTTAATTCATAAATCTGCTGAATTGTTGTTCATATGCAAAAGTCATGTTCTTCATAGGCTCGCTTATTTCACGATGCAAACAAGATAAATGATTTCCTTCATATGTAACTATGACAGGCAGATGTTGATGGGAATGGTACACTAGACTGCGATGAATTTGTTACTGTATCAATTCACCTCAAAAAGATAAACAGTGAAGAGCATTTGTCAAAAGCTTTTAGATATTTTGATAAAGATGGGAATGGTTATATCGATATCCATGAACTGAGAGAAGCTTTGGCAGAGGGAGATCTTGGTCCTAATGAACAATTAATTAATGATATTATTTCTGATGTGGATGTTGATAAGGTATGTATGCATGTGTGTGTAAGTAAATTTTGCTACATTTACAAATAACTATCTTTTATTGGCATTATTTCCTTTGTAGGATGGTCGAATTAGTTATCCCGAATTTCAAATGATGATGGAAGCAGGAGTTGATTGGAAAAACACCTCACGCCAATACTCACGGGTTGTGTTTAACAACCTTAGTCACCGCATGTTTACAGTTGGATCTTAGAACCGACATATAAAGGTATTGTTACCGACTGCCGACCAATATAAATCTAGACATTACATTCATTGACATTTACCCATGTTCCATAGAAATTGTATTTTTCGTCAGTGATCCTGAATTCCTACCATTAGCTGTATGATGTTCTTTTCTGATTATATTCAAGTCCTTAAGCAAAAACAATCCCTCTATCCATGACCCTTATGCTACGTTACAAGCCTAAACCTTATATTTTGGACAAGGCTATGACGCCGATGACAAAACCTTTGTGTTACACCTTTTGTCATAAAGATTTTATGTAAATGATGGATCTTCTATAAGAGAGAAAGCATACTTCAGATATAATTGTGCAAAATTTTGTATGGTAATACAATAATATTAATTCAAGATGAATGCCATGCTTTACAAGTTTTTAGTTTTCGAAAAGTTTACTATTTCTTTACTGTTACACTCCAAGTCAATTGTTCGCTTTTTTTACATGATATATTACTGCTGAGCTCTCAATATTCTGAGCATGACAAATTTTCTGTACAGTATAGATTATGTATTATCGATTTATCAATGTAGGCTTTCTTTATTAATTTCATACTACATCCAAGGTGCCTAATTTATAAGAGAATATTTTTCTTGATAGAGTTGCGGAGACAGCCAATACATTATCTGGAGGTGCGTGTTTAAGTATTGCGGAGCTTGTGGCCAAACTTTTCGTAAAAAGAAATAAACTGACAGGCATGTTTGTGATGGTTTAGGAATGTACATGTTCCTAATATATTAATTACAACTAGATTTAAGAGTATTTACAGGAGCTATATTAATTGGTGTCGTAGCTTACATAATCAACAAACTCTTGGACGCACTGATGTTCAAAGAGGTTTAGGGATATTTCTGTAATGTCATGTGTTGTGACACAATTGATTCCATATAAGTGATGATGCTTTTTTTTAATATGGTATATGCTTTAATTAAGGACTACCTGATGTGGTAATGTTAATTTTCTTTATTTCCTAGTAAATCTCCTTTTTTTGAATCCCCTTCCATGAATGAGCTTTACATGCAAAATTAACCTTACCACATTATTCTCCCAGTTTATTTTACTATGCACAGTACCCTTCCATTACCATCTAGTTTTACTAAACACAATAGATTTCTCTTCTGATCCTTCATATAATTTTCTCTACATCATTTTGATGTTCCAACACCAATTCTTGAAATGTACTTTCTTAACACAGTGTAGAATTTCACATTTCTACTTCAGTTGATCTTTCTGCGGTCAACTGTAACGGTTCCACTTGTTGCAACTTGTTAACATATCCTTCTTGTTTTTGCGTCGATGTTTCTTTTCTAGAACGACGACTGCAACACCTATTTAAGTAAAGCTTCATTTCTTTGCTTGCAAGTAAATGACTCTGGAAATTATAGAGACATGCTCACTTTGAATTTTTGGATGATGTCCTTTATGAAAAGAAAGGAGTGATTATAATGTGACAGCTTTTAACCAAAACGGGGTTTTTAGAGAAAAGGGGAAAATTCCTCTAGACTTGTATAATTTCGATTTAAATGTGGGTGTGTTGTGTTTCTCCTCTTATAAGAGGAAGAGGGTTGTTATTGTTTTAATTGAAAAAAATATGATGTATTTTACTCCTAGACGTTGTAATTGTCTCTTCTTATTTCATAGAAGTGTAGTGATTTCGTTGTATATTA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020248201.1	3.6e-211	calcium-dependent protein kinase 29-like
Swissprot	Q2QVG8.1	1.6e-176	Calcium-dependent protein kinase 29
trEMBL	A0A5P1E768	6.0e-200	Calcium-dependent protein kinase 24

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G12480.1	63.60	0.0	706	CPK7	calmodulin-domain protein kinase 7

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	bit score
AfisC1G08105	AT5G12480.1	533	186	5	51	580	1	528	63.60	706
AfisC1G08105	AT3G57530.1	532	200	3	51	580	1	530	61.65	704
AfisC1G08105	AT5G19450.2	531	195	3	51	580	1	526	62.15	697

Ortholog group

Species	Genes
Allium cepa	g195499.t1
Allium fistulosum	AfisC1G08105
Allium sativum	Asa1G04687.1; Asa7G06491.1
Arabidopsis thaliana
Oryza sativa	LOC_Os12g12860.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	112	370	250.9	1.2e-74
PF13499.3	EF-hand_7	Domain	419	476	37.8	1.7e-09
PF13499.3	EF-hand_7	Domain	488	550	47.5	1.6e-12

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0005509	F	calcium ion binding
GO:0005739	C	mitochondrion
GO:0004683	F	calmodulin-dependent protein kinase activity
GO:0004698	F	calcium-dependent protein kinase C activity
GO:0035556	P	intracellular signal transduction
GO:0005516	F	calmodulin binding
GO:0005524	F	ATP binding
GO:0005634	C	nucleus
GO:0009506	C	plasmodesma
GO:0009536	C	plastid
GO:0009651	P	response to salt stress
GO:0009738	P	abscisic acid-activated signaling pathway
GO:0018105	P	peptidyl-serine phosphorylation
GO:0019903	F	protein phosphatase binding
GO:0046777	P	protein autophosphorylation
GO:0080092	P	regulation of pollen tube growth
GO:1901979	P	regulation of inward rectifier potassium channel activity

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K13412	CPK; calcium-dependent protein kinase	EC:2.7.11.1	Plant-pathogen interaction	ko04626

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network