result

Gene information

Detail information of AfisC1G08189

Location

Gene	Chr	Start	End	Strand
AfisC1G08189	chr1	1496669201	1496672442	-

Sequences

CDS

>AfisC1G08189
ATGGATCCACTCTACAAAACAGCAGCAAATTTTACATGTTTGACATTGTTTCAGCTGTTAGTTGTTGTAACTTCAACTTCAGCAGCATCAACAGCTTCAGAAAACTGCTCAGAAAAATGTGGCAACATGAACATCTCCTATCCATTTGGCATTAAAAATGGATGTTTCCGCGATGGTTTTCAAATCAACTGCAATGAAACAACCGGTACAGCAACCACAATTGATGATGTCGAAATCATCGATATATCACTTTCTCAAGCTCAAATGCGCGTCTACAACTGGATCAGCTTTGAGTGCAATTATCTAAGAGGAGGAAACAACCTAAGCTTCCTTAGTTATCTAGGCATAAGCGACCGGCGATACAGACTTTCACACACACGCAACATATTTACTGCAGTGGGATGCCAGACTCTTGCAACTATATCTGATCCTTATACTCAAAGCAATCATTATACAAATAATTCTGATATATTTGCTACTGGCTGTATATCTTTATGCACCAAACAAAGTAGAATTGTGAATAATTCAACATGTTCAGGAGTAGGATGTTGCCAATCCTTGCAGTTATGCGTTTGTTGCAGCTACAGCTTTCTTCAATCGGACATTGAAGGAGGAAAATTGGTCAGACGATATGAGCAGGCTCCTGTGGTGCTAGATTGGGTTTTAGGAAATGAGACCTGTACAGAAGCAAAATTGAACAAGTCAGGGAACTATGCATGCGTTAGTTTGAACAGCACTTGTAAGGACTCTCAGAATGGGCCAGGTTATACATGCAATTGCAGTCAAGGTTATGAAGGCAATCCTTATATCTATGGTGGATGCACAGATATCGACGAATGCAAAAATAAAACACTATGCTATGGAAACTGTGCTAATCTACCAGGCAGCTATAGTTGTACATGCCAACTTGGATATGAAGGCTTCCCGAGAATACCAAATGGTTGCAGACCGATAAAGAATTCAAGTATTCCAATATTTGTCATCATACTCATAGCAAGTCTCTTTACATTGCTTGTCGCTGCTGTCGCTGCTATCATGTATTTAATACATGGAAAAACAAAACTAAACAGGGCAAGGGAGAAGTGTTTCAGACAAAATAGAAGATTGTTACTTCAAGCACAGATTAATGCACATCAATCTGTTCGGTTCAGGATATTTTCCATAAAAGACATCCTAAAAGCAACAAACAATTTCGATGAAGGTAGCATTAAAGGACGTGGAGGTCAGGGCATAGTCTATGAAGGAATCATTGACTGCAGACATGTAGCTATAAAAAAGGCTATCATGATCAATGAAAATAGGATGAAGGAATTCGTTAAAGAAACGCATATATTATCTCTCATTAACCATAAAAACGTAGTCCAAATTCTGGGGTGTTGTTTGGAAGTTGAGGTTCCCATCTTGGTTTATGAGTTCGTCTCTGGGGGGACACTATACCAACGTGTTCAAGAGAAGAATCAAAGCATGTCCTTGGGACATCGCCTTCAGATTGCTATTGATACTGCTTCCGCTCTCACTTATTTACATTATGATTCTTTGCCTCCAATTATTCATGGAGACGTTAAATCTTCAAACATACTTCTGGACGAGAATAATATTGCAAAAATATCAGATTTTGGAGCTTCAATGTTACCCCTAATGGAAATAAATGAAACAGGCGTACCCGGCACTTATGGTTACTTAGATCCAGAGAGTTTATTAACAGGTCAGCTGACCAAAAAGAGCGATGTTTATAGTTTTGCAGTTGTCTTTCTGGAGCTGTTAACTGGAATGAAAGCAGTGTATTTTGATGAGTCTAGAGAGAAAAGAACCCTTGCGGCAACATTCAAAGAAGAAGGTCTCCAAGGGATTTTGGATGATGAAATCAAGCATGTGATGACAAAAGAACAGATAACAGAATTTTCAGAGCTTTTGAACAATTGCCTGGAGGAAAATGGGAGTGAAAGACCAACAATAAAAAAGGTCTTGGCCTGGCTTCGAAAGATACAAGAATTTGATCCAAAATTATCAGAAGAAAGTGAATATGACCTTCTAGAACCAGTGTATGCTGAATCATGTAATCACGGCCCAAATACAACTCAAATTTTCAGTTCAGAGCATCGAGTATTGTTCGAATTGGATTGCCCTCTCACAAGATAG

Protein

Gene

>AfisC1G08189
CTTACTAACAAAATTTGTTCAGGTGTATTTATACACACACAATATCTTCGATTCCTTTTGTCAGTCTCATACGCCACCAACAATGGATCCACTCTACAAAACAGCAGCAAATTTTACATGTTTGACATTGTTTCAGCTGTTAGTTGTTGTAACTTCAACTTCAGCAGCATCAACAGCTTCAGAAAACTGCTCAGAAAAATGTGGCAACATGAACATCTCCTATCCATTTGGCATTAAAAATGGATGTTTCCGCGATGGTTTTCAAATCAACTGCAATGAAACAACCGGTACAGCAACCACAATTGATGATGTCGAAATCATCGATATATCACTTTCTCAAGCTCAAATGCGCGTCTACAACTGGATCAGCTTTGAGTGCAATTATCTAAGAGGAGGAAACAACCTAAGCTTCCTTAGTTATCTAGGCATAAGCGACCGGCGATACAGACTTTCACACACACGCAACATATTTACTGCAGTGGGATGCCAGACTCTTGCAACTATATCTGATCCTTATACTCAAAGCAATCATTATACAAATAATTCTGATATATTTGCTACTGGCTGTATATCTTTATGCACCAAACAAAGTAGAATTGTGAATAATTCAACATGTTCAGGAGTAGGATGTTGCCAAGTAACTATACCAGAAGGACTCTCGTATTATGGAATAAAATTCCATCCTGGATTTTTCAATAAAGATATCTGGGATTACAGTCCTTGCAGTTATGCGTTTGTTGCAGCTACAGCTTTCTTCAATCGGACATTGAAGGAGGAAAATTGGTCAGACGATATGAGCAGGCTCCTGTGGTGCTAGATTGGGTTTTAGGAAATGAGACCTGTACAGAAGCAAAATTGAACAAGTCAGGGAACTATGCATGCGTTAGTTTGAACAGCACTTGTAAGGACTCTCAGAATGGGCCAGGTTATACATGCAATTGCAGTCAAGGTTATGAAGGCAATCCTTATATCTATGGTGGATGCACAGGTATATTAATTAAATGACCTCTTTGTATTAGCTCGTAATCTTTATATGTTGAATCAGAGTGAAATGTTTGCGTTTATTGCTGCGGATAGATATCGACGAATGCAAAAATAAAACACTATGCTATGGAAACTGTGCTAATCTACCAGGCAGCTATAGTTGTACATGCCAACTTGGATATGAAGGCTTCCCGAGAATACCAAATGGTTGCAGACCGATAAAGAATTCAAGTATTCCAATATTTGTCATCATACTCATAGGTACATAAACAAATTCTCTCACTTCATTTAAGTTGTATTTTAGTACTTAAATCCGAATGCTTAAAGCTATTATCCTCTCTTCCATTATTGTGTCAAGGAACGTAGTATTGGAGATATATGGAAAGAAATAATCAAATAACATGAAATTTATTTTACCTGAAATGAGATAATCATTATGTTGCACGGACACGGGAAAACAGTTCATCCTTTCATTATCAACTGTAGCAGTGCAATTTGTTGATAGATACATCATATACTGAACTAGAAATACAATTTAAATTTCAGCTAACGACCAAGGTGACAATGGTAAGACATTTTGTTATGTTTGAATTCGATTAACTTAATTAGCATCCCAGACATTTGGTCTCAACGTTGAGTAAAAACTGAAAAGATTAGATAAGTGTATGTGTGTACAATTAATATGACGAAAAAGATGCACTGCAAGTGCAATGTGAAGAGTTTAATTATGTGGACATGTAACTAAAGTAAGGCTGCGTATAATAATTTTTCACTTACCTGGTGTTTCGAATATCTCGGAAATAAGATTGATATATATAGGGTTATTATTGCATACCTGTTGGATAGCAATCAAGTATAAATAGTCATATTGGTACCCCATTTTGGAATGCATTTTTAAGCATATATATAACTGTAAATTAGTAAAAAAGAAAAAGCGTGAGAAGACCCATGACTATAACAATATTGAATTGGATCAGAATAAGCATGAACAGAGGTTACAACCACAATAAAGGGACATGTTACATTATTCCTTATAGTAAAGGTAGTTCTACATGTAATCTTTATGCTACTCGTTTATGACAATAAACTACTAATGCCATATGCAGCAAGTCTCTTTACATTGCTTGTCGCTGCTGTCGCTGCTATCATGTATTTAATACATGGAAAAACAAAACTAAACAGGGCAAGGGAGAAGTGTTTCAGACAAAATAGAAGATTGTTACTTCAAGCACAGATTAATGCACATCAATCTGTTCGGTTCAGGATATTTTCCATAAAAGACATCCTAAAAGCAACAAACAATTTCGATGAAGGTAGCATTAAAGGACGTGGAGGTCAGGGCATAGTCTATGAAGGAATCATTGACTGCAGACATGTAGCTATAAAAAAGGCTATCATGATCAATGAAAATAGGATGAAGGAATTCGTTAAAGAAACGCATATATTATCTCTCATTAACCATAAAAACGTAGTCCAAATTCTGGGGTGTTGTTTGGAAGTTGAGGTTCCCATCTTGGTTTATGAGTTCGTCTCTGGGGGGACACTATACCAACGTGTTCAAGAGAAGAATCAAAGCATGTCCTTGGGACATCGCCTTCAGATTGCTATTGATACTGCTTCCGCTCTCACTTATTTACATTATGATTCTTTGCCTCCAATTATTCATGGAGACGTTAAATCTTCAAACATACTTCTGGACGAGAATAATATTGCAAAAATATCAGATTTTGGAGCTTCAATGTTACCCCTAATGGAAATAAATGAAACAGGCGTACCCGGCACTTATGGTTACTTAGATCCAGAGAGTTTATTAACAGGTCAGCTGACCAAAAAGAGCGATGTTTATAGTTTTGCAGTTGTCTTTCTGGAGCTGTTAACTGGAATGAAAGCAGTGTATTTTGATGAGTCTAGAGAGAAAAGAACCCTTGCGGCAACATTCAAAGAAGAAGGTCTCCAAGGGATTTTGGATGATGAAATCAAGCATGTGATGACAAAAGAACAGATAACAGAATTTTCAGAGCTTTTGAACAATTGCCTGGAGGAAAATGGGAGTGAAAGACCAACAATAAAAAAGGTCTTGGCCTGGCTTCGAAAGATACAAGAATTTGATCCAAAATTATCAGAAGAAAGTGAATATGACCTTCTAGAACCAGTGTATGCTGAATCATGTAATCACGGCCCAAATACAACTCAAATTTTCAGTTCAGAGCATCGAGTATTGTTCGAATTGGATTGCCCTCTCACAAGATAGAATCTAT

Functional annotation

Database	accession number	e-value	annotation
nr	XP_009401089.2	1.8e-135	PREDICTED: putative wall-associated receptor kinase-like 16
Swissprot	Q9LMN8.2	1.0e-95	Wall-associated receptor kinase 3
trEMBL	A0A8D7A1H2	6.4e-135	(wild Malaysian banana) hypothetical protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G21240.1	36.11	3e-104	376	WAK3	wall associated kinase 3

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC1G08189	AT1G21240.1	709	356	22	34	675	29	707	36.11	3e-104	376
AfisC1G08189	AT1G21270.1	692	367	21	34	675	27	690	35.69	3e-102	369
AfisC1G08189	AT1G21210.1	703	354	23	36	675	28	696	35.85	2e-101	366

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF13947.3	GUB_WAK_bind	Domain	34	137	87.4	9e-25
PF00069.22	Pkinase	Domain	405	657	143.4	7.3e-42

Gene Ontology

Accession	Ontology	Name
GO:0016020	C	membrane
GO:0006468	P	protein phosphorylation
GO:0016043	P	cellular component organization
GO:0016301	F	kinase activity
GO:0044710	P	single-organism metabolic process
GO:0044763	P	single-organism cellular process
GO:0044767	P	single-organism developmental process
GO:0048856	P	anatomical structure development
GO:0050896	P	response to stimulus
GO:0065007	P	biological regulation
GO:0071944	C	cell periphery

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network