result

Gene information

Detail information of AfisC1G08192

Location

Gene	Chr	Start	End	Strand
AfisC1G08192	chr1	1497390998	1497394091	-

Sequences

CDS

>AfisC1G08192
ATGAAATCCCTCTGCAAAAGAGTATTAACTTCTACATTTCTCACACTGTTTCAGCTGTTAGCTGTTGTAGCTTCAACTTCAGCAGCATCAACAGCTTCAGAAAATTGCTCAGAAAAATGTGGCAACATGACCATCTCCTATCCATTTGGCATTAAAAATGGATGTTTCCGCGATGGTTTCCAAATCAACTGCAATGAAACAACCGGTACAGCAACCACAGTTGATGGTATCGAAATCATCGATATATCACTTTCTCAAGCTCAAATGCGCGTCTACAACTGGATCAGCTTTGAGTGCAATTATCTAAGAGGAGGAAACAACCTAAGCTTCCTTAGTTATCTAGGCATAAGCGACCGGCGATACAGACTTTCACACACACGCAACATATTTACTGCAGTGGGATGCCAGACTCTTGCAGTTTTACGTGATCCTTATACTCAAAGCAATCAATATACAAATAATTCTGATTTAGTTGCTACTGGATGTATATCTTTATGCACCAACCAAAGTAGATTTGGGAACGATTCAACATGTTCAGGAGTAGGATGTTGTGAAGCAGCAATACCACCGGGGCTCTCATATTATTCTATAAAGTTTGATCCTAATTTTCGCAATAAAGATATCTGGGATTACAGTCCTTGCAGTTATGCGTTTGTTGCAGAAGAAGGGTTCTACAGCTTTCTTCAATCGGACACTGAAGGAGGAAAATTGGTCAGACGACATGAGCGGGCTCCTGTGGTGCTAGATTGGGTTTTAGGAAATGAGACCTGTACAGAAGCAAAATTGAACAAGTCAGGGAACTATGCATGTGTTAGTTTGAACAGCATTTGTAAGGACTCTCAGAATGGGCCAGGTTATACATGCAATTGCAGTCAAGGTTATGAAGGCAATCCTTATATCCATGGTGGATGCACAGATATCGACGAATGCAAAAATAAAACACTATGCTATGGAAACTGTACTAATCTACCAGGCAGCTATAGTTGTACATGCCAACTTGGATATGAAGGCTTCCCGACAATACCAAATGGTTGCGGACCGATGAAGAATTCAAGAATTCCAATATTTGTCATCATACTCATAGTTGGTTTCAGCACATTTCTCTTCAGTGCTGTTCTGTACACAACACTCGAAAAAGTAAAGCAAATTAGAGCCAAAGAGAAATGCTTCAGACAAAACGGAGGCTTACTGCTACAATCTCAGATAAACGCACATCAATCAGTGCGATTCAAGATATACTCAATAAAAGAAATCAGAAAGGCAACGGACAACTTCAATGAAAATTCCATTGTAGGCCGGGGTGGCCAGGGGATAGTCTTCAAAGGAATTACATATAACAACACCAAAGTTGCCATTAAAAAGTCTATCGTAATAGATGCAAAGAGAATGAAGGTGTTTGCGAAGGAAATGTATGTACTATCTCTCATAAACCACAAAAACGTGATTCAAATTTTAGGCTGCTGTCTAGAAGTAGAAGTTCCTATCTTAGTGTACGAGTATATACCTAGAGGTACATTGTACCAGCGCATTCAGTCTATGGATCAAAATATGTCATTGAGTTTTCGGCTTAAGGTTGCCATTGAGACTGCATGTGCACTAGCCTATTTACATAAAGATTCTCACCCTTCAATAATTCATGGGGACATTAAATCTTCAAACATATTACTGGATGAAAATGATGTGGCAAAAGTATCTGATTTTGGAGCTTCTATGTACCCTCTTAAAGAAGTAAATGATACGGGTGTACCTGGTACGTACGGGTATTTAGATCCAGAGAGCTTAGTTACGGGTCAACTTACTGCAAAGAGCGATGTATTCAGTTTTGGAGTGGTTGTTCTAGAACTATTGACAAGGATTAAGGCAGTGTATTTCGAGGAGTCTGGAGAAAAAAAGAACTTGTCACTTAGATACAAAGAGGAAGGGTTAGAAAGACTTCTAGATGATGAAATCAAGCACAGGATGCCTAAAGAGCAAATATTAGAACTTTCAGAGCTTTTAACCGCGTGCTTAAAAACCTACGGAGATGAAAGACCGACAATGACAAAAGTAGTGGCATGGCTGCATAAAGTGAGAGAATACGATCAGAACTTGATTCCAGATGACAAAATTGATCCAATTATATTGTCTGTAAACGCAGAAGGAAGCAACCGTGGTACCAACGTGCCCGACTATTATAGTTCAGGTGACCAAGCGGCAATGATATTAGACTATCGCCTTACTAGATAG

Protein

Gene

>AfisC1G08192
ATGAAATCCCTCTGCAAAAGAGTATTAACTTCTACATTTCTCACACTGTTTCAGCTGTTAGCTGTTGTAGCTTCAACTTCAGCAGCATCAACAGCTTCAGAAAATTGCTCAGAAAAATGTGGCAACATGACCATCTCCTATCCATTTGGCATTAAAAATGGATGTTTCCGCGATGGTTTCCAAATCAACTGCAATGAAACAACCGGTACAGCAACCACAGTTGATGGTATCGAAATCATCGATATATCACTTTCTCAAGCTCAAATGCGCGTCTACAACTGGATCAGCTTTGAGTGCAATTATCTAAGAGGAGGAAACAACCTAAGCTTCCTTAGTTATCTAGGCATAAGCGACCGGCGATACAGACTTTCACACACACGCAACATATTTACTGCAGTGGGATGCCAGACTCTTGCAGTTTTACGTGATCCTTATACTCAAAGCAATCAATATACAAATAATTCTGATTTAGTTGCTACTGGATGTATATCTTTATGCACCAACCAAAGTAGATTTGGGAACGATTCAACATGTTCAGGAGTAGGATGTTGTGAAGCAGCAATACCACCGGGGCTCTCATATTATTCTATAAAGTTTGATCCTAATTTTCGCAATAAAGATATCTGGGATTACAGTCCTTGCAGTTATGCGTTTGTTGCAGAAGAAGGGTTCTACAGCTTTCTTCAATCGGACACTGAAGGAGGAAAATTGGTCAGACGACATGAGCGGGCTCCTGTGGTGCTAGATTGGGTTTTAGGAAATGAGACCTGTACAGAAGCAAAATTGAACAAGTCAGGGAACTATGCATGTGTTAGTTTGAACAGCATTTGTAAGGACTCTCAGAATGGGCCAGGTTATACATGCAATTGCAGTCAAGGTTATGAAGGCAATCCTTATATCCATGGTGGATGCACAGGTATATTAATTAAATGACCTCTTTGTATTAGCTCGTAATCTTTATATGTTGAATCAGAGTGAAATGTTTGCGTTTATTGCTGCGGATAGATATCGACGAATGCAAAAATAAAACACTATGCTATGGAAACTGTACTAATCTACCAGGCAGCTATAGTTGTACATGCCAACTTGGATATGAAGGCTTCCCGACAATACCAAATGGTTGCGGACCGATGAAGAATTCAAGAATTCCAATATTTGTCATCATACTCATAGGTACATAAACAAATTCTCTCACTTCATTTAAGTTGTATTTTAGTACTTAAATCCGAATGCTTAAAGCTATTATCCTCTCTTCTATTATGTGTCTAGGAACGTAGTATTGGAGATACATGGAAAGAAATAATCAAATAACATGAAATTTATTTTACCTGAAATGAGATAATCATTATGTTACACGGACACGGGAAAACAGTTCATCCTGTAGCAGTGCAATTTGTTGATAGATATATCATATACCGAACTAGTAATACATTTATGCATGCAGTTGGTTTCAGCACATTTCTCTTCAGTGCTGTTCTGTACACAACACTCGAAAAAGTAAAGCAAATTAGAGCCAAAGAGAAATGCTTCAGACAAAACGGAGGCTTACTGCTACAATCTCAGATAAACGCACATCAATCAGTGCGATTCAAGATATACTCAATAAAAGAAATCAGAAAGGCAACGGACAACTTCAATGAAAATTCCATTGTAGGCCGGGGTGGCCAGGGGATAGTCTTCAAAGGAATTACATATAACAACACCAAAGTTGCCATTAAAAAGTCTATCGTAATAGATGCAAAGAGAATGAAGGTGTTTGCGAAGGAAATGTATGTACTATCTCTCATAAACCACAAAAACGTGATTCAAATTTTAGGCTGCTGTCTAGAAGTAGAAGTTCCTATCTTAGTGTACGAGTATATACCTAGAGGTACATTGTACCAGCGCATTCAGTCTATGGATCAAAATATGTCATTGAGTTTTCGGCTTAAGGTTGCCATTGAGACTGCATGTGCACTAGCCTATTTACATAAAGATTCTCACCCTTCAATAATTCATGGGGACATTAAATCTTCAAACATATTACTGGATGAAAATGATGTGGCAAAAGTATCTGATTTTGGAGCTTCTATGTACCCTCTTAAAGAAGTAAATGATACGGGTGTACCTGGTACGTACGGGTATTTAGATCCAGAGAGCTTAGTTACGGGTCAACTTACTGCAAAGAGCGATGTATTCAGTTTTGGAGTGGTTGTTCTAGAACTATTGACAAGGATTAAGGCAGTGTATTTCGAGGAGTCTGGAGAAAAAAAGAACTTGTCACTTAGATACAAAGAGGAAGGGTTAGAAAGACTTCTAGATGATGAAATCAAGCACAGGATGCCTAAAGAGCAAATATTAGAACTTTCAGAGCTTTTAACCGCGTGCTTAAAAACCTACGGAGATGAAAGACCGACAATGACAAAAGTAGTGGCATGGCTGCATAAAGTGAGAGAATACGATCAGAACTTGATTCCAGATGACAAAATTGATCCAATTATATTGTCTGTAAACGCAGAAGGAAGCAACCGTGGTACCAACGTGCCCGACTATTATAGTTCAGGTGACCAAGCGGCAATGATATTAGACTATCGCCTTACTAGATAGACTTTCTTAGTAAAGATATATGTATATTGTATTCTAAGTGTGCAAGTACAAAATAACAAAGCCCTGGTCAAATTTAGGGTAGTCGTCTCTAAATGCAGGGGTTGATATTGGAATAAAAATAAAAATAAGGAGATCGTCTAGAACTGTAATTTGCTGAAGCATTCCCTGTTACAGGGGATATTATAAGTTGAGCTATCCCAATGGTATTGTAATATGTAATGGTATTGTAATGTGTACGTATTTCGCTCGAAGTGTATTAAAATGTGTAATATTATGACTTTGAACTTTGAACCATGCCTATTTTATATTAATGTGTTGGTTATATATAATTAAGCGAGTACATGCAGGAGATTACACCATAATATTTGACCAAAGTTTGATCTTTTGCTCTATTCCTTGATTCACAATGTATACGTGTACATATGTTACGTATGTTAAGCCAAAATTTGGGTGTTGGTATGCGTGCTTATAAAAGAATGCAGTCACGCAATCAAAACTGAATATGCTA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_008802182.1	1.3e-149	putative wall-associated receptor kinase-like 16
Swissprot	Q9LMN8.2	1.1e-103	Wall-associated receptor kinase 3
trEMBL	A0A8B7CMA2	5.4e-153	putative wall-associated receptor kinase-like 16

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G21240.1	37.32	1e-115	414	WAK3	wall associated kinase 3

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC1G08192	AT1G21240.1	710	386	23	13	691	8	689	37.32	1e-115	414
AfisC1G08192	AT1G21250.1	710	383	20	13	691	9	683	36.76	7e-113	405
AfisC1G08192	AT1G21210.1	689	365	22	36	691	28	684	37.59	1e-112	404

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF13947.3	GUB_WAK_bind	Domain	34	137	86.5	1.8e-24
PF07714.14	Pkinase_Tyr	Domain	429	685	143.2	8.1e-42

Gene Ontology

Accession	Ontology	Name
GO:0016020	C	membrane
GO:0006468	P	protein phosphorylation
GO:0016043	P	cellular component organization
GO:0016301	F	kinase activity
GO:0044710	P	single-organism metabolic process
GO:0044763	P	single-organism cellular process
GO:0044767	P	single-organism developmental process
GO:0048856	P	anatomical structure development
GO:0050896	P	response to stimulus
GO:0065007	P	biological regulation
GO:0071944	C	cell periphery

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network