Detail information of AfisC1G08239


Location
GeneChrStartEndStrand
AfisC1G08239chr115067700551506789554+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrKZN11047.11.1e-36hypothetical protein DCAR_003703
SwissprotQ8VZ17.29.3e-30Suppressor of variegation 3-9 homolog protein 6
trEMBLA0A166IEG57.6e-37YDG domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT2G22740.138.285e-34 142SDG23;SUVH6SU(VAR)3-9 homolog 6

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag361885.t1
Allium fistulosumAfisC1G08239
Allium sativumAsa7G06583.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF02182.14SAD_SRADomain301437107.93.4e-31

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0005634Cnucleus
GO:0010200Presponse to chitin
GO:0010216Pmaintenance of DNA methylation
GO:0016571Phistone methylation
GO:0031048Pchromatin silencing by small RNA
GO:0042054Fhistone methyltransferase activity
GO:0044427Cchromosomal part

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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