Detail information of AfisC1G08243
| Gene | Chr | Start | End | Strand |
|---|
| AfisC1G08243 | chr1 | 1507292671 | 1507295832 | - |
| Database | accession number | e-value | annotation |
|---|
| nr | XP_030492319.1 | 1.2e-55 | mediator of RNA polymerase II transcription subunit 31 |
| Swissprot | Q8VYB1.1 | 4.6e-44 | Mediator complex subunit SOH1 |
| trEMBL | A0A7J6EJ60 | 8.7e-56 | Mediator of RNA polymerase II transcription subunit 31 |
| TAIR id | % identity | e-value | bit
score | gene aliases | Short description |
|---|
| AT5G19910.1 | 67.01 | 1e-61 | 233 | MED31 | SOH1 family protein |
>>>Show top 3 blast result 
| Query id | Subject id | alignment
length | mis
matches | gap openings | query
start | query
end | subject
start | subject
end | % identity | e-value | bit
score |
|---|
| AfisC1G08243 | AT5G19910.1 | 197 | 49 | 5 | 7 | 195 | 5 | 193 | 67.01 | 1e-61 | 233 |
| AfisC1G08243 | AT5G19910.2 | 230 | 51 | 7 | 7 | 195 | 5 | 223 | 55.22 | 8e-57 | 216 |
| Pfam ID | Pfam name | type | alignment_start | alignment_end | bit_score | Evalue |
|---|
| PF05669.9 | Med31 | Family | 32 | 124 | 122.5 | 4.9e-36 |
| Accession | Ontology | Name |
|---|
| GO:0000920 | P | cell separation after cytokinesis
|
| GO:0003713 | F | transcription coactivator activity
|
| GO:0006259 | P | DNA metabolic process
|
| GO:0006357 | P | regulation of transcription from RNA polymerase II promoter
|
| GO:0009405 | P | pathogenesis
|
| GO:0016592 | C | mediator complex
|
| GO:0070783 | P | growth of unicellular organism as a thread of attached cells
|
| GO:0070847 | C | core mediator complex
|
| GO:1900233 | P | positive regulation of single-species biofilm formation on inanimate substrate
|
| KO | Name | Enzyme ID | Pathway | Pathway ID |
|---|
| K15153 | MED31, SOH1; mediator of RNA polymerase II transcription subunit 31 | EC:- | - | - |