Detail information of AfisC1G08470


Location
GeneChrStartEndStrand
AfisC1G08470chr115458116491545836386+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020249824.11.1e-109U-box domain-containing protein 33-like isoform X1
SwissprotQ5WA76.11.7e-80Serine/threonine-protein kinase
trEMBLA0A0D9VJ793.5e-102RING-type E3 ubiquitin transferase

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT2G45910.144.853e-82 303U-box domain-containing protein kinase family protein

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Ortholog group
SpeciesGenes
Allium cepag460860.t1
Allium fistulosumAfisC1G08470
Allium sativumAsa7G06840.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00069.22PkinaseDomain333587158.61.7e-46

Gene Ontology
AccessionOntologyName
GO:0005886Cplasma membrane
GO:0005515Fprotein binding
GO:0002229Pdefense response to oomycetes
GO:0004842Fubiquitin-protein transferase activity
GO:0016567Pprotein ubiquitination
GO:0010726Ppositive regulation of hydrogen peroxide metabolic process
GO:0010942Ppositive regulation of cell death
GO:0016301Fkinase activity

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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