result

Gene information

Detail information of AfisC1G08977

Location

Gene	Chr	Start	End	Strand
AfisC1G08977	chr1	1655132402	1655133270	-

Sequences

CDS

Protein

Gene

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020249927.1	6.2e-40	probable LRR receptor-like serine/threonine-protein kinase At1g53440 isoform X2
Swissprot	C0LGG9.2	3.0e-39	Probable LRR receptor-like serine/threonine-protein kinase At1g53440
trEMBL	A0A8J5LAK9	2.6e-40	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G53440.1	63.71	6e-41	163		Leucine-rich repeat transmembrane protein kinase

>>>Show top 3 blast result

Ortholog group

Species	Genes
Allium cepa	g424007.t1
Allium fistulosum	AfisC1G08977
Allium sativum	Asa1G02458.1; Asa6G03959.1; Asa6G03962.1; Asa8G02553.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	26	135	78.7	4e-22

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0005576	C	extracellular region
GO:0004675	F	transmembrane receptor protein serine/threonine kinase activity
GO:0004702	F	receptor signaling protein serine/threonine kinase activity
GO:0007169	P	transmembrane receptor protein tyrosine kinase signaling pathway
GO:0005524	F	ATP binding
GO:0009506	C	plasmodesma
GO:0009620	P	response to fungus
GO:0009861	P	jasmonic acid and ethylene-dependent systemic resistance
GO:0010193	P	response to ozone
GO:0019901	F	protein kinase binding
GO:0031625	F	ubiquitin protein ligase binding
GO:0045088	P	regulation of innate immune response
GO:0046777	P	protein autophosphorylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network