result

Gene information

Detail information of AfisC1G09010

Location

Gene	Chr	Start	End	Strand
AfisC1G09010	chr1	1660522768	1660525662	+

Sequences

CDS

>AfisC1G09010
ATGCCTGCTCCGCTCTATCGCCATCGCCCTTGCTTTCTACCGCTGAGATTCTCAACAGTGTTTATGATATCTGGTATAGGGTTGAAGAAGAAATTGGAGAAAAACTTTGGGAAATTAGATGCATATTTCAACAAAATGATCGAGGAACATTTGAGTGGAAGGAAGCAAGAAGAGGAGGTTGAGGATTTAGTAGATGTGTTGCTTAGACTTGGAAATGATCCTAGTTATGGAGACATCTTCAGTACCATGGATCACATCAAGGCTCTTATCATGGCAGAGAAAGAGTTTAAAGTAGAGGTTGAAGCAATCGGTAAAGTAAGGCACAAGAACCTTGTGGGTCTTCTGGGATTTTGCGCTGAGGGTTCTCAAAGGATGCTTGTATACAAATATGTTGAAAATGGTAATTTAGAGCAGTGGTTACATGGAGACATCGGGCTAGTCAGTCCATTAACCTGGGATATTAGGATGAAAATAGCCATTGGAACTGCAAAAAGAATAGCATATTTACATGAAGGTTTAGAGCCTAAAGTTGTGCATCGAGATATCAAATCAAGCAATATTCTCCTGGATAAGCATTGGAATCCTAAAGTATCAGATTTTGGATTAGCAAAGCTACTAGGGAGTGGATCGAGCTATGTTACTACACGTGTTATGGGAACTTTCGGGTTCGTTCAACTTCTTATACTTCCACATAATCATACACGCTATAATATTTTGTTAATAGATTATCGACTCTCATGTTTCTGTAGTTATGTCGCACCTGAATATGCTTGCACTGGTATGCTTAATGAAGCAAGTGATATATACAGTTTTGGAGTGCTGCTAATCGAATTGATTACGGGACGTAGCCCTGTTGACAACAAAAGACCACCTGGAGAGGTAGTAAACTTGGTGGATTGGTTTAAAGGAATGGTAGGCAGTAAAAGAGGAGAAGAAGTGATGGACAAGCGAATTGATTCTCAACCCTCACCAAGAGCTTTAAAAAGAGTTTTGTTGGTTTGTTTACGGTGCATTGATTCAGATGCTCATAAGAGACCTAAGATGGGGCAAATTGTTCATATGCTCGAAGGAGATGAATTTCATTTTCGTGCGGAACATCGATCAACTAGAGAATCCTTCATGCCAACAAGTCCTTTAGTCCTACCAAG

Protein

Gene

>AfisC1G09010
ATGCCTGCTCCGCTCTATCGCCATCGCCCTTGCTTTCTACCGCTGAGGTAAGCATCAATCCATACTGCCAAATTACATTACCCCTTTTTATCCGGTGATAAACATGGAGGTGGTAGTTAGAAAGGAAGCAGTAAAGTGCATGAGATCCTTGAAGAGACTCAATTTTTGTTAGGAGGTTTCTGCGTTGCTGATTTTTTCCCTCATTTAGCTTGGGTCGAAAGATTCACCGGTATCTAACATATCTTCTAACGAATCTTCGTATAATTTCTGTTTTGTATCTCAGTTTCCAAATATCTACGTACATGTAATATCCAATTTAAAATAAATTGTTGTTACTTGTTAGCATAGCAAGGTAAGAACCTAACCTTAGAGAGAAGGGCATTGTGTTCGGAGAACAAGAATTTTCATTTATTAATTACGTGTTAGATTCTCAACAGTGTTTATGATATCTGGTATAGGGTTGAAGAAGAAATTGGAGAAAAACTTTGGGAAATTAGATGCATATTTCAACAAAATGATCGAGGAACATTTGAGTGGAAGGAAGCAAGAAGAGGAGGTTGAGGATTTAGTAGATGTGTTGCTTAGACTTGGAAATGATCCTAGTTATGGAGACATCTTCAGTACCATGGATCACATCAAGGCTCTTATCATGGTATGTCTTATTTGTTTGATTGTTGCATATATAAACTACATGGATGGATATGCATGCATATTACACACAGAATATATGCATAGTGAAAATAATGAAATACATAGATCATGAACATTTCATCATTTAGAGGTTGAATGGCACCTTTTTCATGCATTGAGTTACAGTACGTCAAATATCACAAAATTTTAAAGATGCTTAATCTAAATTATGATTATCATGTCCAAGAAAATAGGACCATCGACCACCATGTCCTACTGTGAGTTTTTTCCTTTTTCCCACAATTTTTGCAATTACTATAGATCAAATTTTAGTTCACATAATACTATACTAATTGACCATAAATTTGATACAGTCCCAGGTTAGAAAGTTTTATATTTTGATCAAACTTGATTCACAAAAATATAATAATAATTATTATATTATTAATATTATACCTATTGATCATCTTTGTCCTTTTAATGCTATGAGATATACAATCAACTTTTAAAAAAATACTAAAGCAACTGCGACCTTTTTTTTGCACTTTTAGTAGATTTAATATATGATGTAACTATTAGAGTTCAAATTATGCAGCTGAAAAATATGTTCACATTAGTTTGTACTCACTGTATTATAGTTAACTATGCTAAGTTTTCTTCATATGTAGCTCAATAAGTTAACTATGCAGATTTAATGGACGGTCTTATGAATTGCGTTTGTAAGTCAGTAGGCTTGTGGAAAAAACTTTTGCAGGGGACAGGCAGAGAAAGAGTTTAAAGTAGAGGTTGAAGCAATCGGTAAAGTAAGGCACAAGAACCTTGTGGGTCTTCTGGGATTTTGCGCTGAGGGTTCTCAAAGGTGAACTATAAGTTTTACATCCTTTTCATTTTCAACATATACTGCATTCCATAGTTATTGAAAAAAAAAATCATCTTTTGCATATAGGAGTCTGTTTTAAGCATACTATGTACACTCAATTTTTTGATCTATTGAGTTAATTTTAGGTACCATGAATATATATTTTTTGCTATAACATAAGTAGTTAATTAGCTCCTGCTCTTATCCAGGATGCTTGTATACAAATATGTTGAAAATGGTAATTTAGAGCAGTGGTTACATGGAGACATCGGGCTAGTCAGTCCATTAACCTGGGATATTAGGATGAAAATAGCCATTGGAACTGCAAAAAGGTAATCATCCTCTATTTATTTTCATTTTCTTGTACATTAAAAGCAGAAACCCAAAACAATTACTTTCAGACAATTATCATATTACTCTCAACTCATAACCCCCTTGTACTTGTTACAACCCTTTCAACGTGTTCCTCTCTTTCCTATACATACAGAATAGCATATTTACATGAAGGTTTAGAGCCTAAAGTTGTGCATCGAGATATCAAATCAAGCAATATTCTCCTGGATAAGCATTGGAATCCTAAAGTATCAGATTTTGGATTAGCAAAGCTACTAGGGAGTGGATCGAGCTATGTTACTACACGTGTTATGGGAACTTTCGGGTTCGTTCAACTTCTTATACTTCCACATAATCATACACGCTATAATATTTTGTTAATAGATTATCGACTCTCATGTTTCTGTAGTTATGTCGCACCTGAATATGCTTGCACTGGTATGCTTAATGAAGCAAGTGATATATACAGTTTTGGAGTGCTGCTAATCGAATTGATTACGGGACGTAGCCCTGTTGACAACAAAAGACCACCTGGAGAGGTAGTTCAAAATTATACTCTCAACTTATGATTGTATTCATTTCATATCTCATGTAACATTGGCAAGCTGTGAGAACAAATACTACTTCCTTTGATCAACACCATACAAAAAGGGTGCATCAATAATTAGCACATGAAATATCGAAGTATTTACTGATATTACTCGTATTGTCAAAATATAGGTAAACTTGGTGGATTGGTTTAAAGGAATGGTAGGCAGTAAAAGAGGAGAAGAAGTGATGGACAAGCGAATTGATTCTCAACCCTCACCAAGAGCTTTAAAAAGAGTTTTGTTGGTTTGTTTACGGTGCATTGATTCAGATGCTCATAAGAGACCTAAGATGGGGCAAATTGTTCATATGCTCGAAGGAGATGAATTTCATTTTCGTGCGGTGTTATCTCTTTTTATATATTTATCATATAGTAGATTATAATAAACTTTTGGTTTTACAATTGCTAAGTGCATTGTTATGATGCAGGAACATCGATCAACTAGAGAATCCTTCATGCCAACAAGTCCTTTAGTCCTACCAAG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_008785669.1	1.9e-120	probable receptor-like serine/threonine-protein kinase At4g34500
Swissprot	Q6NKZ9.1	4.0e-115	Probable receptor-like serine/threonine-protein kinase At4g34500
trEMBL	A0A8B7BUH0	1.4e-120	probable receptor-like serine/threonine-protein kinase At4g34500

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G34500.1	69.10	4e-117	418		Protein kinase superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC1G09010	AT4G34500.1	301	62	3	73	371	163	434	69.10	4e-117	418
AfisC1G09010	AT1G01540.2	281	63	2	91	371	190	441	67.26	3e-107	385
AfisC1G09010	AT4G01330.1	280	65	2	92	371	199	449	66.43	3e-104	375

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	93	353	109.6	1.5e-31

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0004675	F	transmembrane receptor protein serine/threonine kinase activity
GO:0005634	C	nucleus
GO:0007166	P	cell surface receptor signaling pathway
GO:0019722	P	calcium-mediated signaling
GO:0009506	C	plasmodesma
GO:0009507	C	chloroplast
GO:0009738	P	abscisic acid-activated signaling pathway
GO:0009845	P	seed germination
GO:0010068	P	protoderm histogenesis
GO:0019901	F	protein kinase binding
GO:0042335	P	cuticle development
GO:0046777	P	protein autophosphorylation
GO:0048364	P	root development
GO:0048367	P	shoot system development
GO:1900459	P	positive regulation of brassinosteroid mediated signaling pathway
GO:1905393

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network