Detail information of AfisC1G09063


Location
GeneChrStartEndStrand
AfisC1G09063chr116701656821670187830-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020277297.10.0e+00protein GFS12 isoform X2
SwissprotF4JY12.10.0e+00GREEN FLUORESCENT SEED 12
trEMBLA0A8B8JC610.0e+00protein GFS12 isoform X1

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G18525.152.220.01484protein serine/threonine kinases;protein tyrosine kinases;ATP binding;protein kinases

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag212939.t1
Allium fistulosumAfisC1G09063
Allium sativumAsa7G06794.1
Arabidopsis thalianaAT5G18525.1
Oryza sativaLOC_Os01g22390.2; LOC_Os01g22390.3

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00069.22PkinaseDomain13927435.18.3e-09
PF02138.15BeachFamily278486143.57.6e-42
PF00400.29WD40Repeat1212124714.70.039
PF00400.29WD40Repeat1385142117.40.0053

Gene Ontology
AccessionOntologyName
GO:0007017Pmicrotubule-based process
GO:0005515Fprotein binding
GO:0005634Cnucleus
GO:0006623Pprotein targeting to vacuole
GO:0006796Pphosphate-containing compound metabolic process
GO:0006996Porganelle organization
GO:0009816Pdefense response to bacterium, incompatible interaction
GO:0012505Cendomembrane system
GO:0043167Fion binding
GO:0043232Cintracellular non-membrane-bounded organelle
GO:0044425Cmembrane part
GO:0044444Ccytoplasmic part
GO:0044446Cintracellular organelle part
GO:0050794Pregulation of cellular process
GO:0051336Pregulation of hydrolase activity
GO:1990234Ctransferase complex

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K17601WDR81; WD repeat-containing protein 81EC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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