result

Gene information

Detail information of AfisC1G09142

Location

Gene	Chr	Start	End	Strand
AfisC1G09142	chr1	1683176430	1683181141	+

Sequences

CDS

>AfisC1G09142
ATGGGCAACACATGCCGGGGCACATTTCCAAGCAAATACCTGCACGGCTATTCGCACCCATCAAACCCGTCCTTCTCCTCTTCCCGGTCCTCCTCCTCCAACTACTCCGCCTCTAGCAACGTCTCCGACCTCCCCGACCTCACCCCAAAGCCCCCCAAGGTCCTCCTCACCCCCAAAATGAGCCATCGTCGTGGCCTCGTTGACCCCACCACCACCTCCATCCTAGGCCAGAAGACCCCCAGCATCCACGACCTCTACACCTTAGGCCGTAAACTCGGCCAAGGCCAATTCGGCACCACCTACCTAGCCACTGAGATCTCAACTGGGATCGACTATGCATGCAAGTCGATCTCCAAGAGAAAGCTCATCTCCAAGGAGGACGTGGAGGACGTGAGGAGGGAGATACAGATAATGCACCATCTGTCGGGACACAGGCACGTGGTTCAGATAAAGGGGGCTTATGAGGACCCTTTGTACGTGCACATCGTCATGGAGCTGTGCGCTGGGGGCGAGTTGTTCGACAGGATCATTCAGAGGGGGCATTATAGCGAGAGGAAAGCTGCCGAGTTGACCAAGGTCATCGTTGGGGTCGTTGAGGCGTGCCACTCTCTTGGGGTCATGCATCGCGATTTGAAGCCCGAGAACTTTTTGTTGGTGAACAAGGATGATGATTTGTCCCTTAAAGCGATCGATTTTGGTTTGTCGGTGTTTTTTAAACCAGGTCAGATTTTCACTGATGTTGTTGGAAGTCCGTACTATGTTGCACCAGAGGTGTTGTGCAAACACTACGGGCCAGAAGCCGACGTTTGGACCGCCGGAGTCATATTATACATTTTGTTGAGTGGTGTGCCTCCTTTTTGGGCAGAGACACAGCAAGGAATATTTGATGCAGTTCTAAAAGGAGTGATCGATTTCGAATCAGATCCATGGCCTGTGATATCTGATAGTGCAAAGGACCTCATTAAGAGAATGCTTTGCTCTCGACCTTCTGAACGCTTGACTGCTCATGAAGTTCTTTGTCATCCTTGGATATGTGAGCATGGAGTTGCACCTGATCGGGCATTAGACCCTGCAGTTCTCTCTCGTCTCAAACAGTTTTCAGCAATGAATAAACTTAAGAAAATGGCCCTGCGAGTGATAGCAGAAAGCCTTTCGGAGGAGGAGATAGCTGGACTGAAGGAAATGTTTAAGGCCATGGACACAGATAACAGCGGTGCTATCACATTCGATGAGTTAAAGGCTGGACTTAGAAGATATGGTTCTACTTTGAAAGAATCTGAAATACGCGACCTTATGGATGCTGCTGATGTGGACAATAGCGGGACGATAGATTATGGGGAATTCATAGCAGCCACAGTGCACCTGAACAAACTAGAGCGGGAAGAGCATTTAGTAGCAGCATTTCAGTACTTCGACAAGGATGGTAGCGGCTATATCACAGTAGACGAGCTCCAACAAGCCTGCAACGAACACAACATGACCGATGTTTTACTTGAAGATATTATCAGTGAAGTTGATCAAGATAATGATGGTCGTATTGACTATGGTGAGTTTGTTGCTATGATGCAAAAAGGAAGCAACATGGGACTTGGCAGGCGAACTATGCGAAACAGTTTGAATATAAAGATGTGA

Protein

Gene

>AfisC1G09142
CTTGAACCGCGTAATTTATTTTCCTAATTTTGCTCTCCCCCACTCTTCAAAATAATTAAAAAAAGTTATATACAACTTGGAAATTCTGTTTTCTTTTTCCGAAGTTGACTTCTGTTTGCATAACGTAATGAGGATGACTTCTCCTCTTTGAATTCTCATTCTCATTTCTTCTTTCGATCAAATTTGGGATCAATTTCCGAGTAAGTTTCTTTAGCTTAAGCTTAATCTTGCATTGAAAATATATATTCAATTACGATTTCATATTTTTTGCTGACTCAATTCGATTTGTAGTTTGTTAATTTTAAATGGAAATCCAACCAATGTAATGTTGTGAACTACAATTTGTAATGATGCCAGTTTTATGCATTAACGATACGTATCAACAATATTTCCATATCTTCTCTTTAATTTTCTTGGGAAATTTTCATGGTGTAATTTAGTTTTTCTTCCCAAACACAATCGACCATGAATAATTCCCAGATTCCTCTTTTTGTTCAAGCTATTCTCTCAATATAGTTGAGCAGATGTATCTGCTCGAGGTTTTTTAGCAAGAGAATGTACTAAAGAGGGTATCGATATCAACAACATTTTACCTTCATAGCTTCCTATCTTTGAAAAAAAAAGCCTAACTGTTGATAATTTTCACCCATTTTTGTGAAGACATTTTTTTAGTTAATTACAAATTTTGTGCAAAATGACCACATTTTCCCTCTAATTTTCTGGGAAGTTTTTTCTAAGAATTTTGTTATATTTCCCAAACACAATCAATCATCAAGAACTTTCATATTCCTTTATTTGCTCGAAATCTTCTCGTTGTTTATAGTTGAGTATATTTAATTATAATTTCTTTTTTGGTGCTCAATTCTTGTTTTTTAAGCAAGAGAATTTGCTACATGAGGCTATCACTAATCATCAACATTTATAGTTTCCCATTTTTGAAAAGAAAAGAAATTAAAAAAACATCATTGGTAAATGTTTAAATAGAAATAATGGAGTAGAATGTGCTAGGAGAGGATGTATCCTCAGCTGCATTTGTAAAATGTGCTAAGTTGGGACAATTTCAATCCAAATTCATGCAAGTTCATCACTAACCGTCAACTTTTTCTACATTTACAGCTTCCCATTTTTGAGAAAAAAGAAAAGAAAAAGGAAAAGGAAAATATATATCAAACAAATGCCCAACCCTTGAAAACATTTTTTCATGGGCAACACATGCCGGGGCACATTTCCAAGCAAATACCTGCACGGCTATTCGCACCCATCAAACCCGTCCTTCTCCTCTTCCCGGTCCTCCTCCTCCAACTACTCCGCCTCTAGCAACGTCTCCGACCTCCCCGACCTCACCCCAAAGCCCCCCAAGGTCCTCCTCACCCCCAAAATGAGCCATCGTCGTGGCCTCGTTGACCCCACCACCACCTCCATCCTAGGCCAGAAGACCCCCAGCATCCACGACCTCTACACCTTAGGCCGTAAACTCGGCCAAGGCCAATTCGGCACCACCTACCTAGCCACTGAGATCTCAACTGGGATCGACTATGCATGCAAGTCGATCTCCAAGAGAAAGCTCATCTCCAAGGAGGACGTGGAGGACGTGAGGAGGGAGATACAGATAATGCACCATCTGTCGGGACACAGGCACGTGGTTCAGATAAAGGGGGCTTATGAGGACCCTTTGTACGTGCACATCGTCATGGAGCTGTGCGCTGGGGGCGAGTTGTTCGACAGGATCATTCAGAGGGGGCATTATAGCGAGAGGAAAGCTGCCGAGTTGACCAAGGTCATCGTTGGGGTCGTTGAGGCGTGCCACTCTCTTGGGGTCATGCATCGCGATTTGAAGCCCGAGAACTTTTTGTTGGTGAACAAGGATGATGATTTGTCCCTTAAAGCGATCGATTTTGGTTTGTCGGTGTTTTTTAAACCAGGTAAATGTTGTATATAGATGCCTTATTGATGATTGATCACCTACTCTGGTTCAAAATCATAGTAAGAATACTATAGCGATTTAACAATCATTAGACCATAAATCTAATAGCACTACAAATTTGGTGTATTGCCAACATGGTTAGCTCTACTAGTTTGAACCCCCGAACTAACAACCTGCTACTAAAATGCATAGGGAATGTTAAAATGCATCAGATTTGTAAAAGCCTTTAGATTTATGATATAATGGCTTTAAAGGACGTAAAGTACTGTTACTGGTTTTCATCCAAAGTAGGTGATCTAGTTCCTTTATATGTTCCCTTATAAGTTGATGATATGTAATACGCCTTGTTTATTCAGGTCAGATTTTCACTGATGTTGTTGGAAGTCCGTACTATGTTGCACCAGAGGTGTTGTGCAAACACTACGGGCCAGAAGCCGACGTTTGGACCGCCGGAGTCATATTATACATTTTGTTGAGTGGTGTGCCTCCTTTTTGGGCAGGTACATGTATATAAATGTGCTAAACTACTTTATATTTTCTTGAAAGTAGTTTTCAATGTTCACTTCCAAGTAGTTTTGAACAAATAATTGGTAAAGGTGTTTGAAGTTAATATTTGTGTTGGATGTACGTGACTTATGAAGAACCAGTTTAGTCTAAATTACATAAAAAGATATGTATTAAATATAGTTCCAATGCATGTATCCAACGACAAAGGCATTATAGTTATTAAATTGGTCAAAATGACTTGTGAAAGCCTTCCATAAGCTACAAAATAGATGCTTCTCATGTTTTGACTTCTAAGCAACTTATGTTTCTTTCTTAGTAGTTCAAATACATCCACATATGTATAGGATACTTATAATGTGTTTTGACCAGTTACAAGGGGTTGCCAAACATACTTTTAGTTCAATATACTTTAAAATTTTCTGACATTGGAAATTTTATGGCATTTTGATAGAGACACAGCAAGGAATATTTGATGCAGTTCTAAAAGGAGTGATCGATTTCGAATCAGATCCATGGCCTGTGATATCTGATAGTGCAAAGGACCTCATTAAGAGAATGCTTTGCTCTCGACCTTCTGAACGCTTGACTGCTCATGAAGTTCTTTGTAAGTTTTATTATATATATATATATATATATATATATATATAATCATGTATAGAAGTGAGTTAATGGTGATATTATAAAATGAGCAGGTCATCCTTGGATATGTGAGCATGGAGTTGCACCTGATCGGGCATTAGACCCTGCAGTTCTCTCTCGTCTCAAACAGTTTTCAGCAATGAATAAACTTAAGAAAATGGCCCTGCGAGTATGTACATTTATGGCTCTTTTTTGCAAAATAAGAGTTTTCAATATGATTTTGTGTAACACGTACTATGTATCAGGTGATAGCAGAAAGCCTTTCGGAGGAGGAGATAGCTGGACTGAAGGAAATGTTTAAGGCCATGGACACAGATAACAGCGGTGCTATCACATTCGATGAGTTAAAGGCTGGACTTAGAAGATATGGTTCTACTTTGAAAGAATCTGAAATACGCGACCTTATGGATGCTGTAAGCATAATTTTTTTCCCTTCTTCTAACTAAGACATGGATTGAAGAAAATGAAAATAAAAGAATAATATCCTGAAGTAATTAAATACCTCATGTTGGCATCCACTATAGTGAAGTTCTATCATCTATTCTACTAAAATACTGATGCTCTTGCATATTTTCATCCTCACATTTGATACACACATACATATACATACACACGCACTACTTTGAACTGTATGTTTGTATTTATACACACATACACTACTTTGAGCTGTATATATGTATGTATATACATATATGTACGTGCATGCATGCATGCATGCATGCATACATATTAAGGATAGTTAGGGATGAAATGTAATGATATACATGAGTCACATATACGATTTAGGCTGATGTGGACAATAGCGGGACGATAGATTATGGGGAATTCATAGCAGCCACAGTGCACCTGAACAAACTAGAGCGGGAAGAGCATTTAGTAGCAGCATTTCAGTACTTCGACAAGGATGGTAGCGGCTATATCACAGTAGACGAGCTCCAACAAGCCTGCAACGAACACAACATGACCGATGTTTTACTTGAAGATATTATCAGTGAAGTTGATCAAGATAATGTGAGTAAATTTTTTGAGTTCCTTTCTTTTTTCCTTTATTATTTTTGAATCATCGGTTATATTTGAATGTAAAATGTATTAAAATGTCAGGATGGTCGTATTGACTATGGTGAGTTTGTTGCTATGATGCAAAAAGGAAGCAACATGGGACTTGGCAGGCGAACTATGCGAAACAGTTTGAATATAAAGATGTGAGATGCATCTGGAGCTCACCGAGATGCACTTTGCACAGTATTTTATGGGGAATAATTATGTATTTTCCCTTGTTCTTATTTTAATACGGACCTTCTTTTTTTGATGTTTAGGCTGTAAAATGAGTGCTATACATATAACTTAAATGAGCTTTACATATACCCATTTTTTCTTTCTTATCTTCATATATATAACTTAAATGAGCTATGAGCTTCTGCTGCTACGGAGCTTTCAGAAGACCAAACCCCATAGCGAGGGAGATAAGGAGTTCTATGTCAAGCTGAGATTGATTAAAAAGGGTTTCATTATTCAGAAAACACTGGGGACATTGGTTAGAAAGATGAATAAATTGTATCAAAAATTCATAGTACACGAGGATAAGCACACACCGATATAATTTTCTAATTGGTTTTTACATCAATATAATTGTTCATGAACA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020272649.1	9.8e-227	calcium-dependent protein kinase 26-like
Swissprot	Q38872.1	6.6e-212	Calmodulin-domain protein kinase CDPK isoform 6
trEMBL	A0A5P1EED5	7.0e-227	Calcium-dependent protein kinase 26

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G17290.1	81.62	0.0	904	ATCDPK3;ATCPK6;CPK6	Calcium-dependent protein kinase family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	bit score
AfisC1G09142	AT2G17290.1	544	96	4	1	543	1	541	81.62	904
AfisC1G09142	AT4G35310.1	554	100	3	1	543	1	553	79.78	899
AfisC1G09142	AT4G38230.2	470	59	1	74	543	42	507	86.60	857

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	86	344	241.3	1e-71
PF13499.3	EF-hand_7	Domain	392	451	43.1	3.9e-11
PF13499.3	EF-hand_7	Domain	462	523	45.7	6e-12

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0005509	F	calcium ion binding
GO:0005739	C	mitochondrion
GO:0005829	C	cytosol
GO:0004683	F	calmodulin-dependent protein kinase activity
GO:0004713	F	protein tyrosine kinase activity
GO:0005778	C	peroxisomal membrane
GO:0035556	P	intracellular signal transduction
GO:0005516	F	calmodulin binding
GO:0005524	F	ATP binding
GO:0005634	C	nucleus
GO:0005789	C	endoplasmic reticulum membrane
GO:0009507	C	chloroplast
GO:0009738	P	abscisic acid-activated signaling pathway
GO:0009931	F	calcium-dependent protein serine/threonine kinase activity
GO:0010359	P	regulation of anion channel activity
GO:0018105	P	peptidyl-serine phosphorylation
GO:0019252	P	starch biosynthetic process
GO:0046777	P	protein autophosphorylation
GO:1902456	P	regulation of stomatal opening

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K13412	CPK; calcium-dependent protein kinase	EC:2.7.11.1	Plant-pathogen interaction	ko04626

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network