Gene information

Detail information of AfisC1G09291

Location

Gene	Chr	Start	End	Strand
AfisC1G09291	chr1	1706352196	1706352720	+

Sequences

CDS

Protein

Gene

Functional annotation

Database	accession number	e-value	annotation
nr	TXG59443.1	1.6e-21	hypothetical protein EZV62_014016
Swissprot	P42736.2	1.6e-13	Protein RELATED TO APETALA2 3
trEMBL	A0A5C7HQW9	1.2e-21	AP2/ERF domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G22200.1	53.33	2e-17	85.1		Integrase-type DNA-binding superfamily protein

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC1G09291	AT2G22200.1	75	35	0	77	151	58	132	53.33	2e-17	85.1
AfisC1G09291	AT3G16770.1	69	30	0	82	150	71	139	56.52	2e-16	82.0
AfisC1G09291	AT2G47520.1	85	42	1	74	158	37	118	47.06	5e-16	80.5

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00847.17	AP2	Domain	89	137	34.3	1.9e-08

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0001944	P	vasculature development
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0050832	P	defense response to fungus
GO:0005730	C	nucleolus
GO:0009414	P	response to water deprivation
GO:0009651	P	response to salt stress
GO:0009733	P	response to auxin
GO:0009749	P	response to glucose
GO:0009751	P	response to salicylic acid
GO:0009753	P	response to jasmonic acid
GO:0009788	P	negative regulation of abscisic acid-activated signaling pathway
GO:0010104	P	regulation of ethylene-activated signaling pathway
GO:0010143	P	cutin biosynthetic process
GO:0010166	P	wax metabolic process
GO:0010200	P	response to chitin
GO:0044212	F	transcription regulatory region DNA binding
GO:0045893	P	positive regulation of transcription, DNA-templated
GO:0019760	P	glucosinolate metabolic process
GO:0034059	P	response to anoxia
GO:0042991	P	transcription factor import into nucleus
GO:0043565	F	sequence-specific DNA binding
GO:0048825	P	cotyledon development
GO:0051301	P	cell division
GO:0071497	P	cellular response to freezing

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K09286	EREBP; EREBP-like factor	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network