Detail information of AfisC1G09306
| Gene | Chr | Start | End | Strand |
|---|
| AfisC1G09306 | chr1 | 1708332712 | 1708352449 | + |
| Database | accession number | e-value | annotation |
|---|
| nr | XP_020240677.1 | 4.7e-68 | GATA transcription factor 28-like |
| Swissprot | Q5Z4U5.1 | 7.6e-47 | Protein TIFY 2b |
| trEMBL | A0A8B7CSS5 | 9.3e-58 | GATA transcription factor 28-like |
| TAIR id | % identity | e-value | bit
score | gene aliases | Short description |
|---|
| AT3G21175.2 | 56.32 | 5e-53 | 204 | GATA24;TIFY2B;ZML1;ZML1 | ZIM-like 1 |
>>>Show top 3 blast result 
| Query id | Subject id | alignment
length | mis
matches | gap openings | query
start | query
end | subject
start | subject
end | % identity | e-value | bit
score |
|---|
| AfisC1G09306 | AT3G21175.2 | 190 | 71 | 4 | 30 | 208 | 69 | 257 | 56.32 | 5e-53 | 204 |
| AfisC1G09306 | AT3G21175.1 | 192 | 71 | 5 | 30 | 208 | 69 | 259 | 55.73 | 5e-52 | 201 |
| AfisC1G09306 | AT1G51600.2 | 204 | 76 | 4 | 30 | 217 | 73 | 272 | 52.94 | 6e-52 | 201 |
| Pfam ID | Pfam name | type | alignment_start | alignment_end | bit_score | Evalue |
|---|
| PF06200.11 | tify | Domain | 36 | 68 | 48.5 | 3.4e-13 |
| PF06203.11 | CCT | Motif | 98 | 140 | 57.1 | 1.3e-15 |
| PF00320.24 | GATA | Domain | 168 | 204 | 58.4 | 3.6e-16 |
| Accession | Ontology | Name |
|---|
| GO:0000977 | F | RNA polymerase II regulatory region sequence-specific DNA binding
|
| GO:0001085 | F | RNA polymerase II transcription factor binding
|
| GO:0001228 | F | transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding
|
| GO:0003682 | F | chromatin binding
|
| GO:0005634 | C | nucleus
|
| GO:0005667 | C | transcription factor complex
|
| GO:0006351 | P | transcription, DNA-templated
|
| GO:0030154 | P | cell differentiation
|
| KO | Name | Enzyme ID | Pathway | Pathway ID |
|---|
| K13464 | JAZ; jasmonate ZIM domain-containing protein | EC:- | Plant hormone signal transduction | ko04075 |