result

Gene information

Detail information of AfisC1G09327

Location

Gene	Chr	Start	End	Strand
AfisC1G09327	chr1	1711224257	1711228538	-

Sequences

CDS

Protein

Gene

>AfisC1G09327
CTATTAACAGGTCTACGCTATTGATGATTTTTGAGAACCCTTCTGCTACCTAAATTCAGGTATCCGCCTTCTCCCCCAAATCCCAAACCCTAGACGCAAAATAAGATCAAGCACCAAAAATGGTGTGCATACGCCAGGCAACCATGGACGACTTGCTCTCGATGCAAGCGTGCAACCTCTTCTGCCTACCTGAAAACTACCAAATGAAGTACTACTTCTACCACATCCTTTCCTGGCCGCAGCTCCTCTTCGTAGCGCAAGATTACGATAAGAAGATCGTTGGCTATGTGCTTGCCAAAATGGAAGAAGAATCGACGAACAACCCTAATTCGTCGGAGCCGGTCCACGGCCACATAACGTCTCTGGCCGTGCTGAGGACGCATAGGAAGCTGGGATTGGCTACCAAGTTGATGAACGCGGCGCAGAATGCGATGGGGGAGGTGTTCGGAGCGGAGTATGTGAGTTTGCACGTGAGGAGGAGTAATCGAGCGGCGTTTCACTTGTATAATGAGACGCTTGGGTATAAGATTCATGATGTGGAGCAGAAGTACTATGCGGATGGGGAGGATGCGTATGATATGAGGAAGATGCTGAAGGAGAAGCCGCATGCTCATCATCATCATCATCATGGCCATGGGGGTGGGTGTTGTGGGGGTGAGGCAGAAAAAGGAGGAGCTTGAGGTAATTTTACATTACTGTAGTTGCTTTATATTTTCATTTGAATTTGGTATTAAGTAAAACATAATTTTATTATCTGTTCTTGTACCTGTGCTACACCTATGAAAATTCAAAACATATGATGATAAAATTGTAAAATCGTGATTTTGTGTTTGTTTTAATACTGTTTTAGTGAACTTCTGATGTTATGTTATGGCTTTATGACTTACATTTATTTGTTATATTTAAAATATTGGGATTCATTTAATATGAAATGATCGTATTGAAGGTGTTTATTGCCTTGATGAAAAGTTGCCTTTATTCTTCCTTGTATAAATAAAATATCATTGGGACTTTGCATGGCTGTTTTGTTTTTTGCCGCTCATTGCATCAGGATCTGTTTTCTGTTCACTGTTATGCTATAAAATTTATGTATGGATTTTGTTGCATCTATAATAGTTTTAGTTTGCTTTTGACATTTACTTATTGACAAAACAATTAAATTTTATACCACTAATAAAATAATAAATACATGGTTATTTAGTCGCGAGATGTAATTTCATACAATTTGTAATTATTATTTTATAGCTATATTGGCATAGTGGCACTAGTATGTGTGCGTATATCATCACTTGAAATGATCTATGCTCCTTGATAGATTTCTATATTTATGACAACGAATCATGTAACAACTCGGTATTATATTTGTGGTAGCTTGAGGTTTCCGAGGTTTTGCCGAATGGATCATCACTTATATGATATCACAAATTCACAAAACAGTTGCTATTACAGAATGACAATCTCAAACCATTTGATTACAAGATTTTATGCAGTACAACAAATCAAGTAGTACCCATATTCTTTATCGTGAAAATCTCAATGAAAATTTATCATTACGAACCCCTTAGAGAACATGTGTTTCACGTGAGCGTTACGCAAAAGAGAGAATGTTAAGCACAAGCTTTGCTTGTAAACACATTAAAAAAACAATCTTGGGTTTCCAGTTCAACATATCCTATCATGGTTGTATGAAATTTGAAATGTATTTTTGGGTTAACTCATAGGAAAAGAAGTTTCTAAGCATTATTCTAATGATCCAAAAAGTTAGGCCCCATTTAGTTTGTCATTTTCAGTTTTTGCTTTCCGTCCAAACATACAAGGCGCATGCATTTTTGGAAAACATCCAATTTAAAAAATGAAGTTAAAATAGAAAATAGAAAATAGAAAACAAATTTATTTTGTTTTCCGTGTTTTAGGAGACAAAAAAGCATGCAGAACAATCTATTCCCCCGTCCGCTGTTCCTCCATTCCCCCGTCCGCTGTTCCTCCATTACCGCGATGACTTAGAATTTTAAATCTTTTTCTCCGCTCTCCACATATTTTGTAATGAATATTTAAAATGGAAAAGACAAAACTCAAAATGAAACCAAACGGACTCTTAGTGTTTTAGAAACAATGCACAAAATTGAGATACCTTAATATATTGATTGTTATATTTACAATGTTGGAATTCTCTTAATAAAATGATCATATTGAAGGTGTTTATTGTGTTGATGAAAAGTTACCTTTATTCTTCTTTGTGTGGTTGTTTTTTTACAGGTCGTTGCATCAGGATCTATTCTTTGTATTCATTGTTATGCTATAAACCCCCTAGAGAACATGTGCTTCACATGAGTGTTGTGCAAATGAAATAATGTTAAGTATAATCAGGGTTACTGTGTTGTATAATTAACTGCTAAACCAAAATGAAACATGTGTTTCGATTTTACGTGCCATTTTCCTTGATCATCAAGTAATTGTTCCGGACATAAAAAATATGATCCTGGGTTCCAGTTTAATAACTTACCATACTAACATGGTTGTATGAAATTTGAAATGTATTTTTGTGCTAACTCTAGGAAAAGAAGGTTTCTAAGCATTATTAACTAAAGCATGAAAATTCATATTGTTGAAGCATATATTAATATAGTAAAAGTATTATAGAACTGTAGGTGTGTTCTTTGTGTTAAAGATGGGGATTTTGAAAGGGTATTTAAAAGGGGCATGAAAGGAGAAAAAAAATCTGTGAAAGGAGTGCGTTTTGTGTTACGAATGGGGAATTAGAAAGAGGTGTTTGAAAGGAATATTAATTGTTTTGTTACTACTAATTATATTGTTAATGTATTTGTATTTGAAAGGGATAGTGTTTTAAAAGGAAAGAGGATTAACCGGCTACTAATGGTGGTTGACGTCAGATGGTCTGCCGTCGACTGACCGTTTTCAAAAGTTCATCCCAATGGAACAAAATGGTGGGCCACATCTCAGACGCGCGCGACGTGTCGGATGCAACCCAAACTTGACCAGAGCAAAAAATAGCTCCTTACGTGCCCATAGTTTAATGATCCTAAAAGATGTTGCTTTAGAAACAATACACAAAATTGAGATACCTGATATATGGTCAGACTACAAAAGTTGGATATTCAATATAACTAAAACTGAAGATTATTTGCTGAGCTTAGTTCATAGAAACATTAAAAGAGCTATGTGAATATGATTTATAAAAAAACAATAGTTATCGTATGAAGTTCAATTAGTTATGATTGAAACCTCATATGTTCACCACTTTAGCATAAATGTTATAATAGTTCTGAATACTAAATAAATTTTAAATACTATTAAGATGATTTGCTCTTGACCAACTCTTTATAGTTTGAACTAAAAAATATGAAGAAATATTAAAAAAACGATAACTTAAGACCTATGTGAATATAAAAAAGGCTACCCTTCACTTTGCGAATTTGTTTTTTAACAGGTGAAGTTATATCTAAAATTTGTATGAAAGGTTGAGTTTTTATAGTTTGTAAATTTTGAAGAATATCATTCTCAGTAATTGTCTATTTTTTCTGACTGCTTTGATTTTTAATATTCAACTCTTAAATGGACCATGGTTTGCCGACATGAAATTCCCAAATAGAAGGGATTGTTCTTTTAGTGTGTAGTATAAAATATTTAGATAAATCGTGTCATTTTATTACATTAAAAATGAATGCAAAACTACATTATTAAAATACACCAATAAATCTACAACATTTAATAGAAATATGTTAACAGTGGAACCCTACATGTTGATTGTTCTTGTCCGTTTTATAAATATTTCTTATCAACAGTTTATCGAAATGTTGAATATCACATTTAGAATAACACAGTTAAGCACTGATGTTTTGGATTGTGCACTAGCACTTTCTCATATGGAACCTGTGCTTTGTTATTTGCCTGGATTTTATCATTTTTCTCTTCTTAATTGAAGTCTACTCTATGGTGAAAAAAAAAGTATAATAGGAAGTTTAGGATATATAAGAGGATTGTTTGAAAATTTATTCCAGGGATGCTCAATTTTGTTGAGTGTGGAAGATTTGGTGGCCTGTTGCTTGCTTCCTCTCTTTGATGTCTTGATATCCATTGTGAGCCTTTCCTTCTCTCAACATCACCATTAATTTTAAAGCTAGGACCGTTTTAAAAATTATCTGTTCGGTTTTTGTCAAGAATATAGTTTTTATTACGTGTCTTCTAGTACAATGAAACTATTTATTATCATTATTGTTTATTTTTCATGTTTTACATATGTTTCTTGATTTATCGATGATCT

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020590971.1	3.4e-70	N-terminal acetyltransferase A complex catalytic subunit NAA10
Swissprot	Q9FKI4.1	7.6e-67	N-terminal acetyltransferase A complex catalytic subunit NAA10
trEMBL	A0A0D6QX56	3.8e-71	N-acetyltransferase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G13780.1	76.63	6e-72	266		Acyl-CoA N-acyltransferases (NAT) superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC1G09327	AT5G13780.1	184	34	2	1	182	1	177	76.63	6e-72	266
AfisC1G09327	AT1G03150.1	158	94	2	1	158	1	150	35.44	2e-21	98.6
AfisC1G09327	AT2G38130.2	142	83	5	23	164	38	168	33.80	9e-11	63.5

Ortholog group

Species	Genes
Allium cepa	g300481.t1
Allium fistulosum	AfisC1G09327
Allium sativum	Asa5G01654.1; Asa7G00390.1; Asa7G00391.1
Arabidopsis thaliana	AT5G13780.1
Oryza sativa	LOC_Os04g54330.1; LOC_Os04g54330.2; LOC_Os04g54330.3

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00583.22	Acetyltransf_1	Family	49	136	54.1	1.3e-14

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0016020	C	membrane
GO:0005730	C	nucleolus
GO:0006323	P	DNA packaging
GO:0006475	P	internal protein amino acid acetylation
GO:0008340	P	determination of adult lifespan
GO:0009414	P	response to water deprivation
GO:0009793	P	embryo development ending in seed dormancy
GO:0017198	P	N-terminal peptidyl-serine acetylation
GO:0018002	P	N-terminal peptidyl-glutamic acid acetylation
GO:0022626	C	cytosolic ribosome
GO:0031415	C	NatA complex
GO:0032504	P	multicellular organism reproduction
GO:0043022	F	ribosome binding
GO:0043054	P	dauer exit
GO:0051091	P	positive regulation of sequence-specific DNA binding transcription factor activity
GO:1990189	F	peptide-serine-N-acetyltransferase activity
GO:1990190	F	peptide-glutamate-N-acetyltransferase activity

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K20791	NAA10_11, ARD1_2; N-alpha-acetyltransferase 10/11	EC:2.3.1.255	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network