result

Gene information

Detail information of AfisC2G00007

Location

Gene	Chr	Start	End	Strand
AfisC2G00007	chr2	1157675	1160513	-

Sequences

CDS

>AfisC2G00007
ATGCTTCTCTTCATCCTACTATTTGCGTTTCTAGCACGTAGTTCCATTCAGCTAGATTCAATTAATCGAAACCAATCTCTGTCTGGAGATGAAAAGCTTATGTCTGAAGGAGGTCAATTCATACTGGGTTTCTTCAAACCGGGCAACTCTTCATATTATTACATAGGTATATGGTACAAAAACATACAAAAGCTAACCCCAGTTTGGGTAGCTAATAGAAACACACCAATTACTGATCCGAAGAAGAACATGCTCATAATCTCAAACAATGGCAATATAGTTCTTGTAAACGACTCTGGTAACTCTCAAGTATGGTCGACTAACTTGACAAGTAGTGCAGCAAGCTATGCTGTTTTACTCGACACTGGAAACTTCGTACTCAGAGAAAATCAAAGTACTACAACTAACTTATGGCAAAGCTTCGAACATCAAACTAATACTTGGCTTCCAGGTAGCAAACTTGGAGTCGATAAAGTTCATGGAAACAACATTCAACACCTGATATCATGGAAGAGCCCAGACGATCCTTCTTATGGAAGTTACTCTCTTGCTATAGATCCTAACGGAACCAAACAATTCTTCATTACATGGAACAACAGTGTAAACTATTGGAGCAGTGGAATCTGGAACGGTGAAATATTTTCTAATGTTCCGGAAATGGTAGCACATTACTTGTACAACTTCGAATATGTTTCTAACGACAAAGAAGATTACTTCACTTACAGTCTTCAGGATGATGTGTCTTTGATATCGAGGTTTGTTATCGACCTATCTGGTCAGATAAAGCAACTGACCTGGGTAGAGGAGATGAAGCAATGGACTTTATTCTGGGCCCAGCCCAAACGGCAGTGTCAAGTTTATGCCTTGTGCGGCCCTTTTGCTTCTTGCAATGAAGACTCGTATCCTTCTTTCTGCAATTGCATTCGAGGCTTTAGGCAGAAATCAGTTTCTAACATGAGTGGAGGCTGTGTGCGCAACTATCCATTACATAACGGGAAAAATAGCTCTGACTGGTTTCTTGCAATGCATAACATGAGAATGCCTGACGCTGCTATTATTTTAAAGCTGGCCAACGTTACTTCTTCGTCACACTGTGAATATGCTTGCTTGAGTAACAGTTCTTGCAATGCTTATTCCTTTGCAGTTGGCACGGGCTGCTCTATGTGGTGCAGTAGTTTGCTTAACCTTCAAGAACAGTATACGGGTCCTGGTAGTGGAACACTTTTTCTCCGCCTTGCTGCTTCAGAATTTGCTGCAAATATGGTAAACAGTTCAAAATCTGGAAATGCTTTCATCAAAGTGATAGTTGGTGCAACCGTGGGTGGTGTTCTAGCATTAGCACTGACTGTTTCTATTACTATGTACTTTTGCATAATGAAGAAGAGGAGAGAAGGATCATCGAAGTTTAAAATAGGAGAAGGCGGTCTAGTGGCTTATCGATACAGCCATTTGCAGAAGGTTAGCAAGAACTTCTCGGATAAAATAGGAGAAGGTGGATTTGGCTCTGTATACAAAGGCAAATTGCCAGCAGACAGCACAGAAGTGGCCATTAAAAAGCTTCAAGGAGTACGGCAAGGGGAGAAGCAATTTCGAGCAGAGGTGAGCACGATAGGCACCATTCAACACGTTAACCTTGTACGACTGCATGGTTTTTGCTCCGAGGGTCAAAATAGGCTGCTTGTCTACGAATACATGCCTAATGGGTCCCTACAAACTCAATTGTTCAAAAAGGGTGCAAATAGTAGTGTCACTATAAACTGGGACATGAGATACCATATAGCTCTTGGAATCGCTAGAGGTTTGACTTACTTACATAACCACTGTAGAGACTGCATAATCCATTGTGATATTAAGCCTGAAAACATTCTGCTTGATGAGTGTTTTGTTCCAAAAGTGGCAGATTTTGGTCTAGCTAAGCTTTTAGGGAGGGACCTAAGTCGCGTTCTTACAACGATGAGGGGGACAGTGGGGTATTTGGCACCCGAATGGATATCGGGTCTGCCCATCACACCCAAAGCTGATGTGTACAGCTATGGGATGATGCTGTTTGAGATTATATCTGGAAGGAGAAATCTTCAGATGAGCACCAATGAGGATGATGATGATGATGAACCGCACTTTTTTCCTGCAATGGCAGCTACTAAGTTGATGGAAGGGGAAGTCGCGGGTTTGCTGGATGAGAGGTTGGAAGGCGTTGCTAAATTGGAGGAAGTGATCAGGATTTCTAGAGTGGCATGTTGGTGCATTCAAGATGATGAACATTCTAGGCCCACCATGCTTCAAGTCCTACAAATTCTTGAAGGAGTTGTACAAGTCAACATGCCTCCTATACCCAAAGTGTTTCACATGTTTGCTAGTACTGGCGGTATAAGCACCCCTAATTTCTTCTCGGAACTGTCCACTGTCGCTAGTATCCGCTCCCTTAATCCCAATTCAAGCTCCACGGATTGA

Protein

Gene

>AfisC2G00007
TTAATCTGATCTATTTGATGATGGCTTTTCGATTCGACTTGAATGAATACTACAAATGTGCGTACTGTAGCTTAATTAACTACATACTATTGGCATACTAGCTATTTAAACTTAGCATGTAAGCTTTTTGATTTTGCCTCGTACATCTCTACACTCTTTGTTTTCCAAACATTCATTGCTTACATTTTGCAAATGCTTCTCTTCATCCTACTATTTGCGTTTCTAGCACGTAGTTCCATTCAGCTAGATTCAATTAATCGAAACCAATCTCTGTCTGGAGATGAAAAGCTTATGTCTGAAGGAGGTCAATTCATACTGGGTTTCTTCAAACCGGGCAACTCTTCATATTATTACATAGGTATATGGTACAAAAACATACAAAAGCTAACCCCAGTTTGGGTAGCTAATAGAAACACACCAATTACTGATCCGAAGAAGAACATGCTCATAATCTCAAACAATGGCAATATAGTTCTTGTAAACGACTCTGGTAACTCTCAAGTATGGTCGACTAACTTGACAAGTAGTGCAGCAAGCTATGCTGTTTTACTCGACACTGGAAACTTCGTACTCAGAGAAAATCAAAGTACTACAACTAACTTATGGCAAAGCTTCGAACATCAAACTAATACTTGGCTTCCAGGTAGCAAACTTGGAGTCGATAAAGTTCATGGAAACAACATTCAACACCTGATATCATGGAAGAGCCCAGACGATCCTTCTTATGGAAGTTACTCTCTTGCTATAGATCCTAACGGAACCAAACAATTCTTCATTACATGGAACAACAGTGTAAACTATTGGAGCAGTGGAATCTGGAACGGTGAAATATTTTCTAATGTTCCGGAAATGGTAGCACATTACTTGTACAACTTCGAATATGTTTCTAACGACAAAGAAGATTACTTCACTTACAGTCTTCAGGATGATGTGTCTTTGATATCGAGGTTTGTTATCGACCTATCTGGTCAGATAAAGCAACTGACCTGGGTAGAGGAGATGAAGCAATGGACTTTATTCTGGGCCCAGCCCAAACGGCAGTGTCAAGTTTATGCCTTGTGCGGCCCTTTTGCTTCTTGCAATGAAGACTCGTATCCTTCTTTCTGCAATTGCATTCGAGGCTTTAGGCAGAAATCAGTTTCTAACATGAGTGGAGGCTGTGTGCGCAACTATCCATTACATAACGGGAAAAATAGCTCTGACTGGTTTCTTGCAATGCATAACATGAGAATGCCTGACGCTGCTATTATTTTAAAGCTGGCCAACGTTACTTCTTCGTCACACTGTGAATATGCTTGCTTGAGTAACAGTTCTTGCAATGCTTATTCCTTTGCAGTTGGCACGGGCTGCTCTATGTGGTGCAGTAGTTTGCTTAACCTTCAAGAACAGTATACGGGTCCTGGTAGTGGAACACTTTTTCTCCGCCTTGCTGCTTCAGAATTTGCTGCAAATATGGTAAACAGTTCAAAATCTGGAAATGCTTTCATCAAAGTGATAGTTGGTGCAACCGTGGGTGGTGTTCTAGCATTAGCACTGACTGTTTCTATTACTATGTACTTTTGCATAATGAAGAAGAGGAGAGAAGGATCATCGAAGTTTAAAATAGGAGAAGGCGGTCTAGTGGCTTATCGATACAGCCATTTGCAGAAGGTTAGCAAGAACTTCTCGGATAAAATAGGAGAAGGTGGATTTGGCTCTGTATACAAAGGCAAATTGCCAGCAGACAGCACAGAAGTGGCCATTAAAAAGCTTCAAGGAGTACGGCAAGGGGAGAAGCAATTTCGAGCAGAGGTGAGCACGATAGGCACCATTCAACACGTTAACCTTGTACGACTGCATGGTTTTTGCTCCGAGGGTCAAAATAGGCTGCTTGTCTACGAATACATGCCTAATGGGTCCCTACAAACTCAATTGTTCAAAAAGGGTGCAAATAGTAGTGTCACTATAAACTGGGACATGAGATACCATATAGCTCTTGGAATCGCTAGAGGTTTGACTTACTTACATAACCACTGTAGAGACTGCATAATCCATTGTGATATTAAGCCTGAAAACATTCTGCTTGATGAGTGTTTTGTTCCAAAAGTGGCAGATTTTGGTCTAGCTAAGCTTTTAGGGAGGGACCTAAGTCGCGTTCTTACAACGATGAGGGGGACAGTGGGGTATTTGGCACCCGAATGGATATCGGGTCTGCCCATCACACCCAAAGCTGATGTGTACAGCTATGGGATGATGCTGTTTGAGATTATATCTGGAAGGAGAAATCTTCAGATGAGCACCAATGAGGATGATGATGATGATGAACCGCACTTTTTTCCTGCAATGGCAGCTACTAAGTTGATGGAAGGGGAAGTCGCGGGTTTGCTGGATGAGAGGTTGGAAGGCGTTGCTAAATTGGAGGAAGTGATCAGGATTTCTAGAGTGGCATGTTGGTGCATTCAAGATGATGAACATTCTAGGCCCACCATGCTTCAAGTCCTACAAATTCTTGAAGGAGTTGTACAAGTCAACATGCCTCCTATACCCAAAGTGTTTCACATGTTTGCTAGTACTGGCGGTATAAGCACCCCTAATTTCTTCTCGGAACTGTCCACTGTCGCTAGTATCCGCTCCCTTAATCCCAATTCAAGCTCCACGGATTGATGTTGGGTGTTTCCATAATCTTTTTTACCTGAATTAATCTCCTTTGGGTTTCATCTCAAATTGTGTAACATGTGCATGTTGCTGCGTGTTCTTCTATTTTTCACTGAATCATGTCATGTACCTCTATATCATATAGTTAAGGCGCTAAGACGGAAAAATATGTCAAATTTGCGCCTTTTTTTTCCCTTTTCGCCTT

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020256465.1	1.9e-258	G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130
Swissprot	O64477.1	1.1e-199	G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130
trEMBL	A0A5P1F913	1.4e-258	Receptor-like serine/threonine-protein kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G19130.1	51.26	0.0	748		S-locus lectin protein kinase family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC2G00007	AT2G19130.1	796	347	21	2	779	7	779	51.26	0.0	748
AfisC2G00007	AT4G00340.1	773	400	22	20	768	20	761	41.14	5e-153	538
AfisC2G00007	AT4G21390.1	827	458	22	1	781	9	814	36.52	9e-138	488

Ortholog group

Species	Genes
Allium cepa	g90635.t1
Allium fistulosum	AfisC2G00007
Allium sativum	Asa5G00180.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF01453.21	B_lectin	Domain	66	172	103.3	5.8e-30
PF00954.17	S_locus_glycop	Domain	204	314	111.5	2.6e-32
PF08276.8	PAN_2	Domain	334	395	46.5	2.6e-12
PF00069.22	Pkinase	Domain	492	764	179.1	9.3e-53

Gene Ontology

Accession	Ontology	Name
GO:0016020	C	membrane
GO:0004674	F	protein serine/threonine kinase activity
GO:0005488	F	binding
GO:0043231	C	intracellular membrane-bounded organelle
GO:0006468	P	protein phosphorylation
GO:0051707	P	response to other organism
GO:0009875	P	pollen-pistil interaction
GO:0045087	P	innate immune response
GO:0050789	P	regulation of biological process
GO:0071215	P	cellular response to abscisic acid stimulus

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network