result

Gene information

Detail information of AfisC2G00116


Location
GeneChrStartEndStrand
AfisC2G00116chr21296900512969719-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_007144911.16.1e-27hypothetical protein PHAVU_007G193800g
SwissprotA0A3Q7I5Y9.11.7e-29Ethylene-responsive transcription factor C3
trEMBLV7BHA44.4e-27AP2/ERF domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score		gene aliasesShort description
AT3G23240.154.005e-37 149ATERF1;ERF1ethylene response factor 1

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Ortholog group
SpeciesGenes
Allium cepag205211.t1; g205270.t1
Allium fistulosumAfisC2G00116
Allium sativumAsa5G00120.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00847.17AP2Domain136346.04.2e-12

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0001944Pvasculature development
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0050832Pdefense response to fungus
GO:0005634Cnucleus
GO:0009409Presponse to cold
GO:0009507Cchloroplast
GO:0009789Ppositive regulation of abscisic acid-activated signaling pathway
GO:0009861Pjasmonic acid and ethylene-dependent systemic resistance
GO:0009864Pinduced systemic resistance, jasmonic acid mediated signaling pathway
GO:0009873Pethylene-activated signaling pathway
GO:0010186Ppositive regulation of cellular defense response
GO:0010200Presponse to chitin
GO:0044212Ftranscription regulatory region DNA binding
GO:0045893Ppositive regulation of transcription, DNA-templated
GO:0043565Fsequence-specific DNA binding
GO:0051301Pcell division
GO:0090332Pstomatal closure

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K14516ERF1; ethylene-responsive transcription factor 1EC:- MAPK signaling pathway - plantko04016
Plant hormone signal transductionko04075
K09286EREBP; EREBP-like factorEC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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