Detail information of AfisC2G00126


Location
GeneChrStartEndStrand
AfisC2G00126chr21382757813827748+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020248858.16.5e-17uncharacterized protein F54F2.9
SwissprotQ9ASQ2.11.4e-16Membrane-anchored MYB
trEMBLA0A5P1E2754.7e-17Myb-like domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G45420.172.226e-1885.5maMYBDuplicated homeodomain-like superfamily protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
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Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00249.28Myb_DNA-bindingDomain24427.03.4e-06

Gene Ontology
AccessionOntologyName
GO:0005886Cplasma membrane
GO:0016021Cintegral component of membrane
GO:0003677FDNA binding
GO:0003682Fchromatin binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0042393Fhistone binding
GO:0005829Ccytosol
GO:0005783Cendoplasmic reticulum
GO:0045893Ppositive regulation of transcription, DNA-templated
GO:0030308Pnegative regulation of cell growth
GO:0030544FHsp70 protein binding
GO:0031965Cnuclear membrane
GO:0043130Fubiquitin binding
GO:0044822Fpoly(A) RNA binding
GO:0048767Proot hair elongation

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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