result

Gene information

Detail information of AfisC2G00258

Location

Gene	Chr	Start	End	Strand
AfisC2G00258	chr2	29132501	29135358	-

Sequences

CDS

Protein

Gene

>AfisC2G00258
ATGGTAGTAATAATCTTCATGTTGTTATGTTCAATTAAAATATCAACAACGCATGGATCAAAAGAATGCAATCCTTCCAGATGTGGGAATCAACACATAAGCTATCCTTTCACACTAAAAGCAGGTCCTTCTAACTGTATTGGAGATGAAAAGTACCAACTGTCATGTATTGGAAATAAAACATTCATGGCAGCTCCTTATGATAAGTATCTTGTTACCAACATTTCTTACGACAACTCTACCATTAATATAGTTGACATGGAGTTAGCAAGTGGCAAGTGCAGTCTCCATTTCCAAGCTATAACTCCTATTTCCTTTCCAGCCGGATTTGATTTGATCTTGTTTGGTTGGTATGGGTTCATAAACTGTTCGAAAAAGCTAGACAGCAATTTCTCTGGGGCAGTAATTCCCTGCCTTAGTCAAAACAACAGATTCATTTATGTGGTCGACAGTATTTGGGGTTCGATTGAGTCTGTTGCTATATCATGTAGTTATCTGACTATGGTTCCTTCTACGTTTTCTGATGTGGAATTGTACAACAATGGAGATGATATATTTGAAACCATGAAGAATGGGTTCGCCCTTTCATGGACAGAGAGAGAGAAAATTTCAAGATCCAAAATCATACATCACTGCCTTACTCAAGCTGTACGGTAAGTAGCCATATTATCTCTATTTTCAGTCTTCATGTTATCTCTTTTTCAGAAAATTATAGTTTATTGATCGCAACAAATTGTTAATTATCTCCTCCTAATATTTAGTTCACGTTGAAACAATTGTATTCACTAGCTATTTAACCAATCATAAAAAATTTAAGCCATTCACACTTTGAATGAGAAATATAACTAATTTTTTGACTAATGTTAAATCTATAATATACATTATACATGCATAATTTTGCTACCCTATATTGCAGGGAAGCTAAGGTGGACACAAATGATCGGAAATATTATGACCGATTCATATTTTTCTTTCAAATTGAATTCGTATATTGCGTACAGCTTAATAAGGATTCTACTGTATTTGGATGCTCCATTGCTTTTGCTGTGTTGATCAACATCGTATTTCTGTATTTCGGTAATTGCTTCAACATAATACTCAATCACAACAAAAATACAGTGTCTTGAAGTATCTATAAACAAAACTGAATTGACATATAGGAATTACATGGGTTGTGGATCCATGACATATATCATTAATTTTTCTTTTAATTGTGACGGTCAACTAACCAAAAGACGGTATGGTTTTACCATGATATCTTTTTTGCAGTGATAATCAGAGCCGGCAGACTTATAATAGCACCACTATGTATACTTGTCTTTCTCCTCTACGAATTATTAAAAATGCTTTCTCCTATCGACTATATAGAAATTTTTCTACGTAACCAGCAACGAACAACACTAACACGATACGTGTACACTGACATAGTCGCAATGACAAGGCATTTCAAAGATAAATTAGGACAAGGAGGATTCGGAACAGTTTACAAAGGAGAGCTACCTGGTGATTATTTAGTTGCCGTGAAGTTGTTGGGTACATCAAATGATAACGGAGAAGATTTTATTAGCGAAGTATCCACTATAGGTACAATTCATCATACCAATGTTGTTCGATTAATTGGCTTTTGCTCAGAAGGTTTACACAGGGCTCTTGTTTATGAGTACATGTATAATGGATCTTTAGATAAGTATATTTTTTCCTCGACTCAAAAGTTCATGACAAAGAAGCTGACCGAGATAGCTCTTGGAGTGGCACGGGGAATAGATTATTTACATCGAGGATGTGATATGAGGATTCTGCACTTTGATATTAAGCCCCATAATATACTCTTGGATAGTAATTTCGATCCAAAAGTTTCTGATTTTGGACTTGCAAAACTTTATTCCAAAGACAATAGCTTGGTTTCTACTTTTGCAGCAAGAGGTACGGTCAGAATTAATATAATTTAACAGTAAATCATTGGCAATTTTACAACAAATATTTTTTTTTATTCCCCGCCTCATATATGTGTCACTAAATGTCTAATCTAATGGTTTTCCATCTTTCTTTCAGCATATTGTGCTATTTCTTTATGTGATATAAGTTCTCATTTTGGTCTCCTTCATAAAATATACAGAATATGGGATATCAATACAATAAGCTTTGAACTAAGGGGGTACAGCATGGTTAGAGCATCAAAATCTTTCTTAATCAAAAGTTCTCTTAGTTTTCAGTATATAGATCTTTATGATTTATCTCTTGGTGTCGGAATTTTCTCAACAAAGTTGATTCGTATGCTGTATCTTGTGTCGGTCTTATTACCATATACAAAACTTACACTGAATAACATACATAAAGACGTGCTCCTAATTATTTGTATATATTCCTCTCCGCCAATTTCCATAAAATGAGTATTCACAACAGGTACTATTGGATACATGGCACCCGAACTTATTTCAAGAAGTTTTGGACAAATATCGTACAAGTCCGATGTGTATAGTTTCGGAATGCTGCTTCTAGAAATGGCAGGTGGAAGGAGAAACTATGACTCACAGGCGGAGAATTCGAGTGAAGCCTACTATCCCTCATGGATATATGACCGACTGAACAAACAAACAAATTTAGAAGTGTTGGATCATAACATTGAGACCGTAGATGTTGAAATGAAATTGTGTAAAGTTGGACTATGGTGCATTCAAATGTCACCATCTTCTCGTCCCACGATGCTTAGAGTTATAGAAATGCTGGAAGGTAACGTTGAAGATGTGGAAATGCCACCCAAGCCTTTCTTTTTTTCTTCTTCGGACCATACTACAAGGGGACAAAATTCATTTCAGATGTCCTCTAATGAAATATCTACGATTTATGAGAGTGAGTAG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020251698.1	1.7e-182	rust resistance kinase Lr10-like isoform X1
Swissprot	P93604.1	2.3e-102	Probable receptor-like serine/threonine-protein kinase LRK10
trEMBL	A0A5P1FW25	6.2e-182	non-specific serine/threonine protein kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G66980.1	49.52	1e-85	314	GDPDL2;SNC4	suppressor of npr1-1 constitutive 4

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC2G00258	AT1G66980.1	315	150	4	305	610	778	1092	49.52	1e-85	314
AfisC2G00258	AT1G66910.1	328	161	4	316	638	335	659	48.48	1e-84	311
AfisC2G00258	AT1G66930.1	338	155	7	295	612	301	637	47.93	3e-84	310

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF13947.3	GUB_WAK_bind	Domain	21	86	35.9	9.4e-09
PF00069.22	Pkinase	Domain	331	594	164.2	3.4e-48

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0004674	F	protein serine/threonine kinase activity
GO:0006968	P	cellular defense response
GO:0009506	C	plasmodesma
GO:0031625	F	ubiquitin protein ligase binding
GO:0044710	P	single-organism metabolic process
GO:0044763	P	single-organism cellular process
GO:0046777	P	protein autophosphorylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network