result

Gene information

Detail information of AfisC2G00298

Location

Gene	Chr	Start	End	Strand
AfisC2G00298	chr2	34422861	34425691	-

Sequences

CDS

Protein

Gene

>AfisC2G00298
ATGAAGAAATTGGTACCTACAGTAATTTTCTCTCTACTCTTCATATGGTCGGTTAAAGCCTTTCAAGGAAATTATTGCTTTTCCTCTTGCGGAGAGCTACAAGACATCAGCTACCCCTTCAGGTTAAAAAGCGATCCTCCTGACTGCGGAAATCAAACCTACGAACTCTCATGTATCGACAATCAACCGTTCTTGGAACTTCCTTCCGGTAACAATTACTTGGTCACCAGCATTTCCTACGAAAACGCTACAATTGAGGTTGTTGATAAAAGCTTAGCAACTGGCAAATGCGACCTCCCTTTAGAAACTCTTACCGCCAGCTCTTTTCTAAATGGTTATAGGTTCATAGATGGGCATAGCTGGGCTACTTTCATCAACTGTTCCAGAAAGAAAAATGACACCATAGACAATCAGCATGGATCAGTTCCATGCCTTAGTCAAAACAACAGATTCGTCTACGTTTACAATGGGTACAGTGTCAATTCTCTTCTTGCTTCGTGTTGTTACATAACCATGGTTCCTGTAAGTGCTGTCGATGTGAATACTGTTGGAGATGGTATTTTCCAAACCTTTAAGGATGGGTTCACCCTTTCCTGGGAAGTTAAGAAACTTACAAGGTCGGAAATAATTCGTAATTGCCTTCACACAGCTCCGACGTAAGTATTCACCTTTATCTTTGTCTTGGATTATGTTGTTATAAATATGGGAAAATACACCGAGACACAAAAATAAACCCAAAGTTTGATCTCTTTGATTTCCACCTCAAATATAAATCAAGTCATATTCAATGATAAAGAATATTGAATCAAATTTTCTGTTTCAATAGTCGCTTCCTACAAATATTGATTTACATGATCTATGTGTAACCTATGTTGCAGGGAAGCTAGGTACCGTATGTGGCAATTGAACAAATTTGAGCACATAATATATCCCGTCCAGGTCGAGTATGAATTCGTTAACTGCATAAAGAAGACTCACGACTACGCCCTGTACAGATATTCCATTGTGTTCCTTGTGTTCTTTGACATAATATCAGCTTACTTAGGTAATTGTTCTTGCCATTCGCTCACAATATTTTCATACCAACTATTCTACTTTACCCAAAATATTTTCGTCAAAATATTGGAATGTGAGAAAAATAAGTAACCTTCCTGAATTCTACATTTTGCATATGAAATTGTGTTTTCATACCTGATTTTTGTTACTTTAGGCCCCGTTTGGTTTGCAATTTTTAGTTTTGTGTTTTCATCTAAACAAAAATTCGCATTTGTTATGTATTGTTGAAAAACATGCAATTTTGAAAAATGAAACTTAACATAAAAAATAGAAAACAAGTTTATTTGATATTTCGTGTTTTGAGAGATAAGAAAAGAATGTAAAACAATTCATCTCCTCCATTTTCCGTCCATCATCGCGATGGCTAAGAATTGTAATTTTTCCCCATATTTTCTTGTATTTTGTAGTGTATGTTGAAAACGCAAAACTCAAAACTCAAAACGAAATCAAACGAGGCCTTAAATTTTGGTCTTCATAAAATCATTCAATTCTATCAATAAATATGGCTTCTTTTGCAGTGCTTATAACACTCGGAAGATTAATATTTGGACCACTATGTATCTATGTGTTCCTCGTTTATGAACTATTGAAAATGCTTGCTCCTATCGACTCCGTGGAGACATTTCTACGCAATCAACAAAGTGCAACACCAACAAGATACGCCTACACTGACATAATTGCAATGACAAGGCATTTCAAGGATCAATTAGGGCAAGGAGGGTTCGGAACAGTTTACAAAGGAGAGTTACCTGGCGGTCATTTAGTTGCCGTAAAACTATTGGGTAAATCCAACGATAACGGTGAAGATTTCATCAGCGAAGTATCCACCATTGGTACGATTCACCATGTCAACGTCGTACGACTTGTTGGGTTTTGCTCGGAAGGCTCGCATAGGGCTATTGTTTACGAGTACATGCGCAATGGCTCTTTGGATAAGTACATTTTCAATACCAAAGGAACGAAGCAAAAGTTCACGACGGAGAAGCTAAATGAAATAGCTCTCGGCGTAGCAAGAGGAATAGATTATTTGCATCGAGGGTGTGATATGAGGATTCTACATTTCGATATCAAGCCACATAACATTCTCTTGGATGATAGTTTCAATCCTAAGGTCTCCGATTTTGGACTTGCAAAACTTTACCCTAAGGATTACAGCATGGTTTCCGCTTTTGCAGCAAGAGGTATACTATCAGATAACCGCTTATTATCACAAAACTATAACAAATAAGTGTTTCTAAGTCTTTTTTCATAAACTGTAAGCAGTCTTAGTGGGAAAATTTTCTTCTAGTCCCATGCTCGTATCTCATGATGTGGGGCTATCTTAAACAGGTACTATCGGATACATGGCACCTGAACTTATTTCAAGGAGTTTCGGACTCATATCGTACAAGTCCGACGTATATAGTTTCGGGATGTTGCTTCTTGAAATGGCCAGTGGACGAAGGAACTTTGACAACAAGGTGGAGAACTCGAGTCAAGCGTACTACCCTTCTTGGGTTTACGGTCGGCTCGAACAACCCAAAAACATGCAACTATTGAACGAGATAGAGATCGAGGACGTCGAAAGGAAGCTGTGCAAAGTGGGGTTGTGGTGCATTCAAATGGCGCCGAGCGCGCGTCCTTCGATGATGAAGGTTGTGGAAATGCTCGAGGGCAACGTTGACGCAGTGGACATGCCGCCTAAGCCCTTCCTCTTTCGTTCGCCTGTGCCAAACGTGGGTGATACATTTGATTCTTCCTTCGGTGAAATTAAGACCATTTTTGAAAGTGAATAG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020251698.1	5.2e-227	rust resistance kinase Lr10-like isoform X1
Swissprot	P93604.1	5.6e-101	Probable receptor-like serine/threonine-protein kinase LRK10
trEMBL	A0A5P1FW25	3.5e-225	non-specific serine/threonine protein kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G38260.1	36.44	2e-90	330		Protein kinase superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC2G00298	AT5G38260.1	634	333	21	30	640	43	629	36.44	2e-90	330
AfisC2G00298	AT1G66980.1	331	154	6	308	628	778	1105	49.55	4e-89	325
AfisC2G00298	AT1G66910.1	664	369	20	12	635	22	652	33.43	4e-88	322

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF13947.3	GUB_WAK_bind	Domain	26	128	39.8	5.9e-10
PF00069.22	Pkinase	Domain	334	600	171.5	2e-50

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0005576	C	extracellular region
GO:0004675	F	transmembrane receptor protein serine/threonine kinase activity
GO:0006968	P	cellular defense response
GO:0009506	C	plasmodesma
GO:0009620	P	response to fungus
GO:0031625	F	ubiquitin protein ligase binding
GO:0044710	P	single-organism metabolic process
GO:0044763	P	single-organism cellular process
GO:0046777	P	protein autophosphorylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network