result

Gene information

Detail information of AfisC2G00381

Location

Gene	Chr	Start	End	Strand
AfisC2G00381	chr2	49535767	49540070	+

Sequences

CDS

Protein

Gene

>AfisC2G00381
GAAGAAGAAAGAAGAAAAGAAACAACAACCCATCATATATATCAAGAATATAAAGATCAAGAATACAGTTCTTCTAAGTCATTTTTCCCTTCTTCTAAAATATGGAGCTTTTTCCAGCTCAACCAGACCTTTCCCTTCAAATCAGTCCACCAAATAACAACAATAACAAACCAGCTTCAAATGATCAAGAGAGCAATACATCAAATCCAAGATTTTGGTTCAAAAACAACCGCACAGTCATTAACCAATCCCTTGAAAAACCTATAAGAGGAATTCCTATATATCGAACCTCTAATGTCAGTGCTCATGCTTCTTTCCCTTTTGCTAATCCTCCATGTGAATTACCTTCTACAACTAATGCTCAATATGGAAGAGATTCTTCACTGATGAATAATATGATGTCAAGGTCAAGGTTTTTTTCTAGGTTTCCATTGAATAAAAGAAGCACAAGAGCACCAAGGATGAGATGGACTACCTCACTTCACTCTAGATTTGTTCATGCTGTGGAGCTTTTGGGTGGCCATGAAAGTAAATTGATTTAACTTTATTTTATTTTATTTTTGGTGCTATTATGTTTGATTGTTAATGTTTATGTGTACGTAGGGGCAACTCCTAAGTCAGTTCTTGAGCTTATGGATGTGAAGGATCTAACTTTGGCTCATGTGAAATCACACTTGCAAGTAATGAGATTTGTATAGACTATTAATACTATTTTGGTTCTTTCTATTTATTTTTAAATTATATTTGTAGTCTTTTTTCAGTCAACCCATGTAATTCCTAGCCTAGAAGTTAGTGGGTTTTTTGTGGCAGCTTTATTGAAGAAGTAGATCAAGAGGACATTGATGGCAAAAGAGAAAGAAAAATGCAGTGAAACATCATTGTGCAATTATGAGACAAATATTTACTTCTCAATGAGAAAAAATTAATAAAGAACAATGTACCATTAATATACCTTGAAAAGGAAAAACACTAATATTTATTCAAAAGTACATGAGTGAAGACAGATTGTTAATGCATATATATTTTTGTTCATATGTTTAAGGCTTAGGGATACAGTTTTATTAATTAAAAAAATGTTACTGATAATTAATCAGATGTATTTGATTTCATTGCAGATGTATAGAACTGTGAAGACAACTGATAGACCTCTAACTTCTTCAGGTATATATAATATATATAGTTTACTGAAAGATTTTCTTTTGGTTAGTTTGAAGTAAAATCTATACAACATGATAGGACAAACAGAAGCTATAGATCATTCATCAGATGATAGTTTGTCGGACATTCATGGACCTGAACCATTGATGCAAAATATGAAGTTATCAGGCAAAAATGATAGCAGTTATTATGGCTTGTGGAGCAATTCTTCTAGGTAATTATTTATTATATTATTTTTCAAATTTTCCATTAATACATTTAAACTTTTGAAGGAAAATGTTTTTAGTACAAATATGCATCACATTATGTTCAAGGCTGCTACCAATCACTTCCAGAAAAATATGGATTAAGTCATAACATTTTGATAAATGTTACATGCACTATGCGAAGTTGGTATAATTAAGATCCTGAAGGTTATTATATGCCCATTAGTTGTTATAAATCTTACAAAGTTAAAAGTAGTGATCATGGCATGGACACAATAGATTATGCATTCTATTAAACAAAGTATGAAATGGATTTGGAATTTAAGGATGTTAAAGTTTCATATATATAATAAGTAATAGTCTAATATGATATGCATATATACAACTTTTCATCTCATTCTCCACTAGCTTAGTTATAAACTTTTGCATTAAAAGATTGAAGTTTTGATTTGCCCTACATCCTTCAAATGTGACTAGTGGAAAAGCTATCCAATTATTTACAATGGCAATGCATCATTGAATTTCCAATACATTTGGAATCAACTATGTTAGATTCTATAAATTAATCTATCCAACATAATTTTTACTAATTGTTTATTTCTCTACTCGTTTTATTTTATTTTATTTATTAGTACATTTTATTCTTGTAATATTAAAAGTTGAACAAAGTTAAAGCCTTGCTAATGAAAAGATAAACCACTAAAGAACTTAATAATATATAACAAAGATAAAGATCCATCCATATAGAACAAATCAACCTATAGCTAGCTTTCTCGAATATCAAATCAAGAATTTCTACATGCTTTTAATCAAACAAAAAGAAGTGGGCAAGAACACTTTGGGTTCATTAAAGTTGTTTTATCGTGTGTTTTTTCCTAGCCTAATTTGAGATATATCCTACTATATATCCATGCAAGTGCTCACAAAAAGCAAGAAAAGATGTTAGCTTTGTTCCATCTGTCAAGAATCATGAGAGCAACCAAACCTCCATTAGTAGTGCAATCTATAAGTTTGAAATGACTAAAAGTGGCCCATCAATATCATTCCATTCCTATAGAACAATAGTTTGTTTCTAGAATTCTATTTTAAGATGTGTTTGATGCCACGTTTTGATAGTTTAAGTCCTGGACGGGACTCTTGGAACGTATAGATTATACAAAGATTGCTTCTCAACTAGACTTTCTTTTGCATAGGTAATGATGTGCCAAAAATGCAACGTCTACTATACATAAGTTAGTAGGTTTTTACAAACTTGGAATAAGATGACACAAGATCCATGCAATCATTTTGATCGCATAGTACGTAAAATAAGAAGAATCATATGGATTAATGATTTGTTGTTAAACTTCGTCATTTTTAGGCATTGTTACGAAAGCATAGCGAACGATGGCTTGTTAAGTGGCTAACGAGCCACAGAGCACACACATATGATTTGTTGCCACCAACATAATATGTGGCTGCTCAACCAGTTAAGATGACTGGTTACTGAAACAACATTAACAATATCTGACTATGTTCTTTTGCAGTAAAACAGGACAGACAATGTCATTTTATGTGTTTTTACATTAAAATGTCATTCTGTATGCCATTTTAAGCTTATCATGACTCAAATTGAATAAAATGGCAAATTCAATGTCATTTTATTCGATGTAAATGGTGGTTTCAATAATATTTCAATAAGGTTTTTGTGGGTTTGGTTTTTTTCTGAATGTATAGGTCTTTTTGTTTAGTTTTCTAACAGAAAATTTTAAAATGAACAAAACGATAGTTAGGAATAGTCTAAGTTATCAACATCTCCCTAACAAAAATATACAATCCTTAGCCAACAAAGTTGAATCAGTTGGTTAGTAGTTTGAACTACGAGATTAAAGATTACTAGTTCAATCCCCGCAATCGACACTTTTTGACATTGATGAACATGTTCAAATACACACACTCACACTGTCCTCAATGAGGAGCTCATGTGACAAGGTATGAAGATTATATGAAGACAATTATTTTAGGTGTATTGTGGGCAGAAGCATAGTCAATAATGTCCGATTTATCTGAATATTTCAAAAAAGTGCAAAAATAGCCAAGAAATTATGATCTATATTGTAATATGTGTTTTCTCTTCTGGATTTTGAGGATGATTTTAAAATTATAAAACTAATTTGCACCAATAATTAAGGTCCCCAATCCATCAAGCTTAACGTAGAAGCATGTATTCTCTTTTAATTAGTACCAAGCAAATTTCTCAAGCGTAATGGACAATCACATGGGTGTTCGTAAACTTTATTTCATTCATACCAGATCATGATAACTCAAACAATCTAATAGTGAAAGTTTGCTCTTTTTCATCTTTATTGCATGGAATTCCACTTATAAAAAATATTATATTCTTTCCATGTTAATTTTTGCAGTCGAGGAAGTTGGTTTCATGACAAGCCTATTGATTCGAGCCTACCAACTTTTCAGGTATATTTTCCTTTTATTTTATTATTAATCGAGGAATAAATATTATATATAAAAAAAAAGACTCCTCAATAGTACTGATATCAAGTAGTAATAAATTGCATATACATGCAGAATAATGTCCACTATAAAAAAATGGAGGAGATAAGTGATCAGAATTCTCCATGCATTGAGGCAACAACAAACAAGCCTAATTTAGAGTTTACGTTAGGAAGATAACAATATCGATATCGACTTAATTTTTATGTATACATAAGCTTATTTGGATCATAAATTAATTAAGCTTAATACTAAGAGTTATGACCTACTTGAATAAAATATGTAATGAAAGTTCTGCCTAGCTAGCTTTTGATTTCTTTTTCTTTCTTTTTTTGTGGGATTTGTTTCAATCTACGGATAATATGCATGTAGAAGGAAACTATGATGAGTAATTATTGTATACTTCAATAATGTAGAAGTTTACTGCCATTTATTATTAAAGATTTA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020261049.1	6.9e-67	probable transcription factor KAN2 isoform X1
Swissprot	Q9C616.1	2.7e-39	Protein KANADI 2
trEMBL	A0A5P1F5M3	5.0e-67	Myb-like domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G32240.1	52.00	2e-41	166	KAN2	Homeodomain-like superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC2G00381	AT1G32240.1	200	69	7	100	281	196	386	52.00	2e-41	166
AfisC2G00381	AT4G17695.1	335	136	11	1	280	1	316	37.31	1e-39	160
AfisC2G00381	AT5G16560.1	303	95	12	51	281	110	397	39.93	2e-38	156

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00249.28	Myb_DNA-binding	Domain	120	171	31.5	1.3e-07

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0000719	P	photoreactive repair
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0003904	F	deoxyribodipyrimidine photo-lyase activity
GO:0005634	C	nucleus
GO:0006355	P	regulation of transcription, DNA-templated
GO:0007623	P	circadian rhythm
GO:0009536	C	plastid
GO:0009555	P	pollen development
GO:0009650	P	UV protection
GO:0009944	P	polarity specification of adaxial/abaxial axis
GO:0009956	P	radial pattern formation
GO:0010051	P	xylem and phloem pattern formation
GO:0010158	P	abaxial cell fate specification
GO:0010229	P	inflorescence development
GO:0044212	F	transcription regulatory region DNA binding
GO:0016036	P	cellular response to phosphate starvation
GO:0048481	P	plant ovule development
GO:0055063	P	sulfate ion homeostasis
GO:0071486	P	cellular response to high light intensity
GO:1905392

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network