Detail information of AfisC2G00399


Location
GeneChrStartEndStrand
AfisC2G00399chr25140442551416926+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020249734.11.6e-99ADP-ribosylation factor 1-like 2
SwissprotP91924.37.9e-67ADP-ribosylation factor
trEMBLA0A8B7BZY83.4e-99ADP-ribosylation factor

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G17060.187.503e-99 357ARFB1B;ATARFB1BADP-ribosylation factor B1B

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
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Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00025.18ArfDomain6176235.81.8e-70

Gene Ontology
AccessionOntologyName
GO:0000139CGolgi membrane
GO:0005515Fprotein binding
GO:0003924FGTPase activity
GO:0000287Fmagnesium ion binding
GO:0002090Pregulation of receptor internalization
GO:0005829Ccytosol
GO:0005778Cperoxisomal membrane
GO:0005057Freceptor signaling protein activity
GO:0005215Ftransporter activity
GO:0005525FGTP binding
GO:0005770Clate endosome
GO:0030137CCOPI-coated vesicle
GO:0005802Ctrans-Golgi network
GO:0005925Cfocal adhesion
GO:0006661Pphosphatidylinositol biosynthetic process
GO:0006878Pcellular copper ion homeostasis
GO:0006886Pintracellular protein transport
GO:0006892Ppost-Golgi vesicle-mediated transport
GO:0055108PGolgi to transport vesicle transport
GO:0007264Psmall GTPase mediated signal transduction
GO:0014069Cpostsynaptic density
GO:0019003FGDP binding
GO:0043005Cneuron projection
GO:0019886Pantigen processing and presentation of exogenous peptide antigen via MHC class II
GO:0030017Csarcomere
GO:0031252Ccell leading edge
GO:0034315Pregulation of Arp2/3 complex-mediated actin nucleation
GO:0034379Pvery-low-density lipoprotein particle assembly
GO:0042583Cchromaffin granule
GO:0043085Ppositive regulation of catalytic activity
GO:0044822Fpoly(A) RNA binding
GO:0045211Cpostsynaptic membrane
GO:0045807Ppositive regulation of endocytosis
GO:0045956Ppositive regulation of calcium ion-dependent exocytosis
GO:0048471Cperinuclear region of cytoplasm
GO:0050690Pregulation of defense response to virus by virus
GO:0050714Ppositive regulation of protein secretion
GO:0060292Plong term synaptic depression
GO:0060999Ppositive regulation of dendritic spine development
GO:0070062Cextracellular exosome
GO:0070142Psynaptic vesicle budding
GO:0097061Pdendritic spine organization
GO:0097212Plysosomal membrane organization
GO:1902307Ppositive regulation of sodium ion transmembrane transport
GO:1902824Ppositive regulation of late endosome to lysosome transport
GO:1902953Ppositive regulation of ER to Golgi vesicle-mediated transport
GO:1903725Pregulation of phospholipid metabolic process
GO:1990583Fphospholipase D activator activity

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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