result

Gene information

Detail information of AfisC2G00528

Location

Gene	Chr	Start	End	Strand
AfisC2G00528	chr2	75171515	75175206	+

Sequences

CDS

>AfisC2G00528
ATGGCTGCTCCATCTTCATCTTCACCTTCATTTCTCATTCTCATTTTCAAATATGTGCTCTTGTTTTCTGTTATCTACTCACCTCCTATTTTGTGCTGCGACTCTAATGATCTTCAAGCTCTTCAATCTTTTGCAGCTGATCTTGAAAATGGCTCCATTATTTCCACTTGGAATGCTAATGGTTCATGTTGTTATTGGCCTGGAGTTTATTGCAATAGTTTCAATAGAGTTACAAAGCTTCAAGTATCAAACTTCAATTTAGTTGGAAAAGTTTCACGGTCTTTAAGCAATTTGACACATCTCACTTCAGTAGACCTTTCTCATAATTTGTTCACTGGTAGCATTCCAGTTGAATTCTCAAACTTCGTCCATCTTCAAATGCTAAATCTGAGTTATAATGGATTTTCAGGTTCAGTTACAATTTTTAAATCCATGCTGGTGTTGAAAGGTTTGGATTTTTCATCAAATTTCTTTAATGGGTCACTTTCTGATTTGGGAAGTGGCTTCCCGATGCTGTCAATTTTCAATGCAAGCAATAATTCTATGAGTGGCGATATTGGTTCTAACATGTGCATTGGTTCTAAATATTTGAAGGTGATAGATGTTTCTTTGAATTCATTTTCTGGCTCTATCAATGGTGATGTTTTTGCTAATTGTAGTGGTACTCTCCAAGAATTGAATTTTGGGTTCAATTCATTATCAGGTAATATACCTGAGCAACTCTTTGATTTAGCTTCTTTAGTGAGGTTGTCACTTGCATTTAACTCCTTTTCGGGTGAGTTGGATGAAAATTTGAGCAAACTTTTGAAGATTAAATCTTTGATTTTGTCGGGAAATAGATTTAGTGGTCCTATTCCAAATGTATTTGGTAATTTAACAATGCTTGAGCAGTTGATAGCACCTTCAAATTCATTTTCTGGTTTGGTTCCTAATACTCTGTCTATGTGTGCAATGCTAAAAGATCTTGATTTGAGAAACAATTCTCTTTCGGGTGAATTAAATCTCAATTTCTCAAAATTGCCTTTGCTTAGATCTCTTGATCTTGCAAGTAACTATTTAAAAGGTTCTCTTCCTTCAAGTGTTTCTACTTGCCATGAATTGAAAACTTTGAGCCTAGCTAAAAATGCATTTTATGGGGAAATACCTATCGAATTTGAAAAACTTGAATCGCTTTCATTCCTCTCATTGTCAAACAATAGCTTCCATAACATTTCTAGAGCATTATCAGTGCTTCAACAATGTAAAAATCTCAGCACATTGATCCTCACAAAGAATTTTCATGGCGAACAAGTCCCCAAATCCACAATTGAGTTCTTAAATCTTGAAATACTTGCATTTGGAAATTGTGCTCTTAACGGTGAAATTCCTACATGGTTAAAAGGTTGCAAGAAGCTACAAGTGTTGGACTTGTCCTGGAATCGATTCCATGGTACAATTCCTACATGGATTGGACAGTTTGAAGATTTAATCTACTTAGACATGTCCAACAATTCGCTTAGTGGTGAAATTCCAAAAAGTCTAACCCTACTGAAAAGCCTCAGTGTTGCACAAGGCTCTTCAAATGGTAGTTCAATTGTTATGCCTCTCTATGTCAAGCGAAACCAAAGTGTCCTTGGTCTTCAATACAATCAAGTTTCAAGTTTCCCTCCCTCTTTATACTTGAACGATAATAATCTAAACGGATCGATATGGCCTGAATTTGGAAACTTAAAAGCTCTTCATGTTTTGGACTTAAGCCACAATAGAATTTCTGGAACTATTCCCGACACTATTTCGAAAATGGAAAATTTGGAGATTTTAGATCTTTCAAGCAACGAACTCAATGGTTCAATTCCTCGATCCTTAACCAAGCTTACTTTTTTATCCAAATTCAGTGTAGCCCACAATCACTTGGAAGGAGAAATTCCAACTGGTGGTCAATTTTTTACTTTCTCGAATTCATGTTTTGAAGGTAACTCTGGATTGTGTCGCTTTCCTAACAGGTGCAATAAAACATATCCAGCTGCTACGACACCTGCAACACTTTCTTCACAAAGTGGTAGAATTGGGAGGAGAAACATCATAGGTATAACCATTAGCATATGTGTAGGCATTGCTGTACTCTTGGTAGTTCTCTTGGTTAATTTATCAAGAAAAGACACGATCGACCCTACACAGGTAGTGGACATTGATGAAGAAAGAGCTAACTGCTATTCTGACACCACATCCAAGCTTGTAATATTTTTTCAAAACCAGGAGTCTAAAATGGAAATAACCATCAATGACCTATTGAAGTCTACAAACAACTTCGACCAATCAAATATAATTGGGTGTGGAGGATTTGGCCTAGTGTACAAAGCATATCTACCCGATGGCACCAAAGCGGCCATCAAAAAGCTATCTGGAGACTGTGGTCAAATGGAAAGAGAGTTTCAAGCAGAAGTAGAAGCATTATCAAGAGCGCAGCACAAAAATTTAGTCTCTTTAAAAGGTTATTGTCGCCATGGCAATGATAGACTTCTCATCTACTCCTACATGGAAAACGGAAGCCTAGACTACTGGCTGCATGAAAAGTCCGATAGTGGTTCTTGCTTGTTATGGAATTCCAGACTTAAAATAGCTCAAGGATCAGCTAGAGGTCTAGCTTACTTGCACAAGGTTTGTGAACCCAACATCATACATAGAGACGTGAAATCTAGCAACATTTTACTTGATGAAAGGTTCGAAGCACACTTAGCAGATTTTGGGCTTTCTAGACTGATTAGGCCTTACGATACACATGTAACCACTGATTTGGTTGGGACTCTAGGGTATATACCTCCGGAGTATAGTCAGACCTTAAGTGCAACTACTAGAGGCGATGTGTACAGCTTTGGGGTGGTTCTTTTAGAGCTGTTAACTGGTAGGAGACCCGTGGATGTTTGTAAAGGAAGAGGGTGTAGGAATTTAGTGGCGTGGGTTGTTCAAATGAAGTCGGAAGGGAAAGAAGAGTTGGTTTTCGATGAGGGAATTGTGAGCAAAAGTAATGGGAAGCAGCTCATGGCTGTACTTGAGACTGCTTGTAGATGTGTTGCTTTAGATCCGAGACATAGGCCTACTATTGATCAAGTTGTTATGTGGCTTGATGTTGTTGGTGTTGATGCCTGA

Protein

>AfisC2G00528
MAAPSSSSPSFLILIFKYVLLFSVIYSPPILCCDSNDLQALQSFAADLENGSIISTWNANGSCCYWPGVYCNSFNRVTKLQVSNFNLVGKVSRSLSNLTHLTSVDLSHNLFTGSIPVEFSNFVHLQMLNLSYNGFSGSVTIFKSMLVLKGLDFSSNFFNGSLSDLGSGFPMLSIFNASNNSMSGDIGSNMCIGSKYLKVIDVSLNSFSGSINGDVFANCSGTLQELNFGFNSLSGNIPEQLFDLASLVRLSLAFNSFSGELDENLSKLLKIKSLILSGNRFSGPIPNVFGNLTMLEQLIAPSNSFSGLVPNTLSMCAMLKDLDLRNNSLSGELNLNFSKLPLLRSLDLASNYLKGSLPSSVSTCHELKTLSLAKNAFYGEIPIEFEKLESLSFLSLSNNSFHNISRALSVLQQCKNLSTLILTKNFHGEQVPKSTIEFLNLEILAFGNCALNGEIPTWLKGCKKLQVLDLSWNRFHGTIPTWIGQFEDLIYLDMSNNSLSGEIPKSLTLLKSLSVAQGSSNGSSIVMPLYVKRNQSVLGLQYNQVSSFPPSLYLNDNNLNGSIWPEFGNLKALHVLDLSHNRISGTIPDTISKMENLEILDLSSNELNGSIPRSLTKLTFLSKFSVAHNHLEGEIPTGGQFFTFSNSCFEGNSGLCRFPNRCNKTYPAATTPATLSSQSGRIGRRNIIGITISICVGIAVLLVVLLVNLSRKDTIDPTQVVDIDEERANCYSDTTSKLVIFFQNQESKMEITINDLLKSTNNFDQSNIIGCGGFGLVYKAYLPDGTKAAIKKLSGDCGQMEREFQAEVEALSRAQHKNLVSLKGYCRHGNDRLLIYSYMENGSLDYWLHEKSDSGSCLLWNSRLKIAQGSARGLAYLHKVCEPNIIHRDVKSSNILLDERFEAHLADFGLSRLIRPYDTHVTTDLVGTLGYIPPEYSQTLSATTRGDVYSFGVVLLELLTGRRPVDVCKGRGCRNLVAWVVQMKSEGKEELVFDEGIVSKSNGKQLMAVLETACRCVALDPRHRPTIDQVVMWLDVVGVDA

Gene

>AfisC2G00528
TTCAACTACTTGCTCATGAAAGACTTCAATTCTTGTGTAAACTTGAAGCTACTTCCACTTGAGCTCATTAATAAGCATCTTGAAAAGCAAACCCAGACCTCACTTGGATCCAAAAACTCTTTATTTTGGTCCATATTTTTTGTTCCAACTTCCAAACTTGTTTTATAACTCCCCTCGATTTTTTAAATTTATTTTCTTTTGTCCAGCAAACTCAGTACGCTTCTTCTACTTCTTTTTTTCATTTCTTTCCTCGCATTTTATTCCTTCTTATTTTTGAACTTCTTTCCTTTCAGCTTGAAAAATGGGTTCCTCTGCTTTTTGAGCTTCTATTCCCTTTGACCACGAAAAAGGTTCAAATTTGATCGATGTCTTGAAGAAAACATTGTTCCCAAATGGCTGCTCCATCTTCATCTTCACCTTCATTTCTCATTCTCATTTTCAAATATGTGCTCTTGTTTTCTGTTATCTACTCACCTCCTATTTTGTGCTGCGACTCTAATGATCTTCAAGCTCTTCAATCTTTTGCAGCTGATCTTGAAAATGGCTCCATTATTTCCACTTGGAATGCTAATGGTTCATGTTGTTATTGGCCTGGAGTTTATTGCAATAGTTTCAATAGAGTTACAAAGCTTCAAGTATCAAACTTCAATTTAGTTGGAAAAGTTTCACGGTCTTTAAGCAATTTGACACATCTCACTTCAGTAGACCTTTCTCATAATTTGTTCACTGGTAGCATTCCAGTTGAATTCTCAAACTTCGTCCATCTTCAAATGCTAAATCTGAGTTATAATGGATTTTCAGGTTCAGTTACAATTTTTAAATCCATGCTGGTGTTGAAAGGTTTGGATTTTTCATCAAATTTCTTTAATGGGTCACTTTCTGATTTGGGAAGTGGCTTCCCGATGCTGTCAATTTTCAATGCAAGCAATAATTCTATGAGTGGCGATATTGGTTCTAACATGTGCATTGGTTCTAAATATTTGAAGGTGATAGATGTTTCTTTGAATTCATTTTCTGGCTCTATCAATGGTGATGTTTTTGCTAATTGTAGTGGTACTCTCCAAGAATTGAATTTTGGGTTCAATTCATTATCAGGTAATATACCTGAGCAACTCTTTGATTTAGCTTCTTTAGTGAGGTTGTCACTTGCATTTAACTCCTTTTCGGGTGAGTTGGATGAAAATTTGAGCAAACTTTTGAAGATTAAATCTTTGATTTTGTCGGGAAATAGATTTAGTGGTCCTATTCCAAATGTATTTGGTAATTTAACAATGCTTGAGCAGTTGATAGCACCTTCAAATTCATTTTCTGGTTTGGTTCCTAATACTCTGTCTATGTGTGCAATGCTAAAAGATCTTGATTTGAGAAACAATTCTCTTTCGGGTGAATTAAATCTCAATTTCTCAAAATTGCCTTTGCTTAGATCTCTTGATCTTGCAAGTAACTATTTAAAAGGTTCTCTTCCTTCAAGTGTTTCTACTTGCCATGAATTGAAAACTTTGAGCCTAGCTAAAAATGCATTTTATGGGGAAATACCTATCGAATTTGAAAAACTTGAATCGCTTTCATTCCTCTCATTGTCAAACAATAGCTTCCATAACATTTCTAGAGCATTATCAGTGCTTCAACAATGTAAAAATCTCAGCACATTGATCCTCACAAAGAATTTTCATGGCGAACAAGTCCCCAAATCCACAATTGAGTTCTTAAATCTTGAAATACTTGCATTTGGAAATTGTGCTCTTAACGGTGAAATTCCTACATGGTTAAAAGGTTGCAAGAAGCTACAAGTGTTGGACTTGTCCTGGAATCGATTCCATGGTACAATTCCTACATGGATTGGACAGTTTGAAGATTTAATCTACTTAGACATGTCCAACAATTCGCTTAGTGGTGAAATTCCAAAAAGTCTAACCCTACTGAAAAGCCTCAGTGTTGCACAAGGCTCTTCAAATGGTAGTTCAATTGTTATGCCTCTCTATGTCAAGCGAAACCAAAGTGTCCTTGGTCTTCAATACAATCAAGTTTCAAGTTTCCCTCCCTCTTTATACTTGAACGATAATAATCTAAACGGATCGATATGGCCTGAATTTGGAAACTTAAAAGCTCTTCATGTTTTGGACTTAAGCCACAATAGAATTTCTGGAACTATTCCCGACACTATTTCGAAAATGGAAAATTTGGAGATTTTAGATCTTTCAAGCAACGAACTCAATGGTTCAATTCCTCGATCCTTAACCAAGCTTACTTTTTTATCCAAATTCAGTGTAGCCCACAATCACTTGGAAGGAGAAATTCCAACTGGTGGTCAATTTTTTACTTTCTCGAATTCATGTTTTGAAGGTAACTCTGGATTGTGTCGCTTTCCTAACAGGTGCAATAAAACATATCCAGCTGCTACGACACCTGCAACACTTTCTTCACAAAGTGGTAGAATTGGGAGGAGAAACATCATAGGTATAACCATTAGCATATGTGTAGGCATTGCTGTACTCTTGGTAGTTCTCTTGGTTAATTTATCAAGAAAAGACACGATCGACCCTACACAGGTAGTGGACATTGATGAAGAAAGAGCTAACTGCTATTCTGACACCACATCCAAGCTTGTAATATTTTTTCAAAACCAGGAGTCTAAAATGGAAATAACCATCAATGACCTATTGAAGTCTACAAACAACTTCGACCAATCAAATATAATTGGGTGTGGAGGATTTGGCCTAGTGTACAAAGCATATCTACCCGATGGCACCAAAGCGGCCATCAAAAAGCTATCTGGAGACTGTGGTCAAATGGAAAGAGAGTTTCAAGCAGAAGTAGAAGCATTATCAAGAGCGCAGCACAAAAATTTAGTCTCTTTAAAAGGTTATTGTCGCCATGGCAATGATAGACTTCTCATCTACTCCTACATGGAAAACGGAAGCCTAGACTACTGGCTGCATGAAAAGTCCGATAGTGGTTCTTGCTTGTTATGGAATTCCAGACTTAAAATAGCTCAAGGATCAGCTAGAGGTCTAGCTTACTTGCACAAGGTTTGTGAACCCAACATCATACATAGAGACGTGAAATCTAGCAACATTTTACTTGATGAAAGGTTCGAAGCACACTTAGCAGATTTTGGGCTTTCTAGACTGATTAGGCCTTACGATACACATGTAACCACTGATTTGGTTGGGACTCTAGGGTATATACCTCCGGAGTATAGTCAGACCTTAAGTGCAACTACTAGAGGCGATGTGTACAGCTTTGGGGTGGTTCTTTTAGAGCTGTTAACTGGTAGGAGACCCGTGGATGTTTGTAAAGGAAGAGGGTGTAGGAATTTAGTGGCGTGGGTTGTTCAAATGAAGTCGGAAGGGAAAGAAGAGTTGGTTTTCGATGAGGGAATTGTGAGCAAAAGTAATGGGAAGCAGCTCATGGCTGTACTTGAGACTGCTTGTAGATGTGTTGCTTTAGATCCGAGACATAGGCCTACTATTGATCAAGTTGTTATGTGGCTTGATGTTGTTGGTGTTGATGCCTGAGTTTGTTTAGCAGGTGTGATGGAGATTTTGTGATTTATATGTTTAGTGAAATATAGATGTAAATAAAGTGGGGTCTTGTCTTAAATATAATTTTCTATCTATATCACATGAGCTTGCCCCTTTATCTTGTTTTTTTCATGTTAATAAAATTGGAATACACGCACAGTTACTCCA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020256736.1	1.6e-233	phytosulfokine receptor 2
Swissprot	Q9FN37.1	9.2e-154	Phytosulfokine LRR receptor kinase 2
trEMBL	A0A5P1FA03	1.0e-229	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G53890.1	55.89	0.0	1090	AtPSKR2;PSKR2	phytosylfokine-alpha receptor 2

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	bit score
AfisC2G00528	AT5G53890.1	1036	435	11	12	1035	1	1026	55.89	1090
AfisC2G00528	AT2G02220.1	1013	459	12	33	1037	31	1008	50.44	932
AfisC2G00528	AT1G72300.1	1061	545	16	8	1034	22	1074	44.67	825

Ortholog group

Species	Genes
Allium cepa	g345952.t1
Allium fistulosum	AfisC2G00528
Allium sativum	Asa5G00272.1; Asa5G00273.1
Arabidopsis thaliana	AT5G53890.1
Oryza sativa	LOC_Os07g01710.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF08263.9	LRRNT_2	Family	35	72	33.7	3e-08
PF13855.3	LRR_8	Repeat	76	134	28.1	1.2e-06
PF00560.30	LRR_1	Repeat	464	482	10.3	0.79
PF13855.3	LRR_8	Repeat	572	631	37.1	1.7e-09
PF00069.22	Pkinase	Domain	764	1031	147.3	4.9e-43

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0016021	C	integral component of membrane
GO:0001578	P	microtubule bundle formation
GO:0001653	F	peptide receptor activity
GO:0004674	F	protein serine/threonine kinase activity
GO:0004713	F	protein tyrosine kinase activity
GO:0007169	P	transmembrane receptor protein tyrosine kinase signaling pathway
GO:0005524	F	ATP binding
GO:0009506	C	plasmodesma
GO:0009507	C	chloroplast
GO:0009554	P	megasporogenesis
GO:0009556	P	microsporogenesis
GO:0009611	P	response to wounding
GO:0009647	P	skotomorphogenesis
GO:0009729	P	detection of brassinosteroid stimulus
GO:0009742	P	brassinosteroid mediated signaling pathway
GO:0009826	P	unidimensional cell growth
GO:0010234	P	anther wall tapetum cell fate specification
GO:0019199	F	transmembrane receptor protein kinase activity
GO:0019901	F	protein kinase binding
GO:0031347	P	regulation of defense response
GO:0045851	P	pH reduction
GO:0046777	P	protein autophosphorylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network