Detail information of AfisC2G00727


Location
GeneChrStartEndStrand
AfisC2G00727chr29931324399338935+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020256592.10.0e+00protein ALWAYS EARLY 2-like isoform X2
SwissprotQ6A332.17.7e-186Protein ALWAYS EARLY 3
trEMBLA0A5P1FBJ80.0e+00Myb-like domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT3G21430.240.840.0 727ALY3;ATALY3DNA binding

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag264548.t1; g445949.t1; g512627.t1; g98654.t1
Allium fistulosumAfisC2G00727
Allium sativumAsa5G00814.1
Arabidopsis thalianaAT3G05380.1; AT3G05380.2; AT3G05380.3; AT3G05380.4; AT3G05380.5; AT3G21430.2; AT5G27610.1
Oryza sativaLOC_Os01g09760.1; LOC_Os03g43800.1; LOC_Os03g43800.2

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00249.28Myb_DNA-bindingDomain468832.66.1e-08
PF06584.10DIRPFamily606706113.06.2e-33

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0009987Pcellular process

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K21773LIN9; protein lin-9EC:- Cellular senescenceko04218

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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