Detail information of AfisC2G00811


Location
GeneChrStartEndStrand
AfisC2G00811chr2108814034108818600+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020244312.11.0e-77B-box zinc finger protein 19-like
SwissprotC0SVM5.16.5e-53Protein SALT TOLERANCE HOMOLOG 5
trEMBLA0A6P5HLR55.3e-68B-box zinc finger protein 19-like

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT4G38960.154.973e-54 207BBX19B-box type zinc finger family protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
--

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00643.21zf-B_boxDomain579027.72e-06

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0000989Ftranscription factor activity, transcription factor binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005634Cnucleus
GO:0006355Pregulation of transcription, DNA-templated
GO:0007623Pcircadian rhythm
GO:0008270Fzinc ion binding
GO:0010100Pnegative regulation of photomorphogenesis
GO:0010228Pvegetative to reproductive phase transition of meristem

KEGG pathway
KONameEnzyme IDPathwayPathway ID
-----

Expression pattern in different tissues

Expression pattern in BioProjects

Click here to link to expression search in BioProjects.  



Co-expression network

Click here to link to co-expression network search.