Detail information of AfisC2G00852
| Gene | Chr | Start | End | Strand |
|---|
| AfisC2G00852 | chr2 | 114651675 | 114660646 | + |
| Database | accession number | e-value | annotation |
|---|
| nr | XP_020242099.1 | 2.7e-17 | upstream activation factor subunit spp27 |
| Swissprot | O74503.1 | 7.7e-09 | Upstream activation factor subunit uaf30 |
| trEMBL | A0A6P5H4M8 | 6.3e-16 | upstream activation factor subunit spp27-like |
| TAIR id | % identity | e-value | bit
score | gene aliases | Short description |
|---|
| AT2G35605.1 | 60.47 | 1e-22 | 102 | | SWIB/MDM2 domain superfamily protein |
>>>Show top 3 blast result 
| Query id | Subject id | alignment
length | mis
matches | gap openings | query
start | query
end | subject
start | subject
end | % identity | e-value | bit
score |
|---|
| AfisC2G00852 | AT2G35605.1 | 86 | 33 | 1 | 1 | 85 | 1 | 86 | 60.47 | 1e-22 | 102 |
| AfisC2G00852 | AT3G03590.1 | 68 | 28 | 1 | 20 | 85 | 53 | 120 | 55.88 | 3e-16 | 81.3 |
| AfisC2G00852 | AT1G31760.1 | 86 | 46 | 1 | 1 | 85 | 4 | 89 | 45.35 | 3e-16 | 80.9 |
| Pfam ID | Pfam name | type | alignment_start | alignment_end | bit_score | Evalue |
|---|
| PF02201.15 | SWIB | Domain | 32 | 93 | 83.9 | 4.9e-24 |
| Accession | Ontology | Name |
|---|
| GO:0000500 | C | RNA polymerase I upstream activating factor complex
|
| GO:0001165 | F | RNA polymerase I upstream control element sequence-specific DNA binding
|
| GO:0001168 | F | transcription factor activity, RNA polymerase I upstream control element sequence-specific binding
|
| GO:0006325 | P | chromatin organization
|
| GO:0042790 | P | transcription of nuclear large rRNA transcript from RNA polymerase I promoter
|
| KO | Name | Enzyme ID | Pathway | Pathway ID |
|---|
| - | - | - | - | - |