result

Gene information

Detail information of AfisC2G01147

Location

Gene	Chr	Start	End	Strand
AfisC2G01147	chr2	156573373	156575708	+

Sequences

CDS

>AfisC2G01147
ATGGAACAAAGATACGAGCCGTTAAAAGAATTGGGTGCAGGCAATTTTGGCGTTGCTAGATTGGTTAGAGATAAGAGAACTAAAGAGTTGCTTGCTGTTAAGTATATCGAGAGAGGCAAAAAGATTGATGAAAATGTAATGAGGGAGATAATCAACCACAGTTGTTTAAGGCATCCTAATATTGTTCGATTTAAGGAGGTTTTATTGACACCGACACATTTAGCTATTGTTATGGAATACGCAGCTGGAGGCGAACTATTTGATAGAATATTAACGGCTGGTAGATTTAGCGAGGATGAGGCAAGGTATTTCTTTCAGCAACTGATATCTGGTGTCAGTTACTGTCATTCAATGGAAATTTGTCACCGTGATCTGAAATTGGAAAACACACTCTTAGATGGAAGTCCAATACCACGTCTTAAGATATGTGATTTTGGTTACTCAAAGTCAGGTTTATTACATTCGATGCCAAAATCTACAGTGGGGACTCCAGCTTACATTGCACCGGAGATTCTTTCACGAAGAGAGTATAATGGCAAGAATGCAGATGTTTGGTCATGCGGTGTGACGCTATATGTCATGTTGGTTGGCGCGTACCCTTTCGAGGATCCAGCAGATCCTAGAAATTTTAGGAAAACGATTGGTAAAATTATGAGTGTTCAGTACTACATCCCTGATTATGTTCGAATATCTCCTGCTTGCAAACACCTTCTCTCTCGGATTTTCGTAGCCAACCCATACAAGAGAATCACTATAAGGGAGATAAAGCAACACCCATGGTTCTTAAAGAACATGCCTAGGGACTTAATAGAAGGGGAAAGAACAAGATATGAGCGTAACAAGCCTACTCAAACTGTGGGTGAAATCATGAAAGTAATTGAAGAGGCAAGAAGAGTAGCACCAGTTCATAAGCCAATTCAAAGTTCATCCTTTGCCTCCTCGGTAATCAATGTTGAAGATTCTGATTCAGACTCTGAAATAGAGTATGTTGATGCGGAGGGTAGTGGCGAGTTTCTTGAACTTGATATATGCAAGTATTAA

Protein

Gene

>AfisC2G01147
TCTATCATCATACAGGCAGCCTTGTTCTTTTTTCTTTTCGAACAGCTCCTATAAATACTTTTCCTTTCTTCTGTAGTCATTGTATAAACACAAACACAAATGGAACAAAGATACGAGCCGTTAAAAGAATTGGGTGCAGGCAATTTTGGCGTTGCTAGATTGGTTAGAGATAAGAGAACTAAAGAGTTGCTTGCTGTTAAGTATATCGAGAGAGGCAAAAAGGTCCGATTTTTACGATTCTTTCTTGGTTTTGATAAATGGATTTTGTTAAAGTTTTAATTTTGGTTGAGTTGCTTGGAAAAAGATTGCTTTTTTAGTGTTGTTTGTAGAATGTCTGTACTATGAATACAAGATTTTCGATTAAATGCATGCTTCGTTTTGGATTCAGATTGATGAAAATGTAATGAGGGAGATAATCAACCACAGTTGTTTAAGGCATCCTAATATTGTTCGATTTAAGGAGGTAAGTGGACATTTGCCAATTTACACATTTATTCTGCTATGCACAGTTAATATATTTTATTGAAATCTTGTTTGCAGGTTTTATTGACACCGACACATTTAGCTATTGTTATGGAATACGCAGCTGGAGGCGAACTATTTGATAGAATATTAACGGCTGGTAGATTTAGCGAGGATGAGGTATTAAAGAAAATACTTCATACTTAATTTTCCATATTTACATATTGTGGTTATGAACTCATATTCATAAGCAGGATTAATATTTTATGTTTTCGACAGGCAAGGTATTTCTTTCAGCAACTGATATCTGGTGTCAGTTACTGTCATTCAATGGTGAGTTGTTTTATATGCTTTTATGGGTTCAGTAATGTATGTAGCAAGAGAACATAAGAATACATCAATGATATTCATTCAAACATTGTAGGAAATTTGTCACCGTGATCTGAAATTGGAAAACACACTCTTAGATGGAAGTCCAATACCACGTCTTAAGATATGTGATTTTGGTTACTCAAAGGTATATACTATCAGTTTTCATAGTTTGGTCTGAACTTGGTTTAGAATATTGCTAGATTTCTAAGCAGTTAAATATGTTATGAATCTTGCAGTCAGGTTTATTACATTCGATGCCAAAATCTACAGTGGGGACTCCAGCTTACATTGCACCGGAGATTCTTTCACGAAGAGAGTATAATGGCAAGGTATCCTTCCACTTTCTCGTATAGTTATTCACGTGTTAGATTTAAATGCGAAAACATTCAATGATTATGGATGGAGACTTCATAAATGTTGTCACTTGCATGAGTGTATGAATTACTTGATAATAATTGCACTAAACTTTGGATAAACAGTTCGATTCCATCCAGCTGTATTGATCGAGCCTTTTATAATTTAAAAGTTTGAATTTTTTTCCTAAGCAGAATGCAGATGTTTGGTCATGCGGTGTGACGCTATATGTCATGTTGGTTGGCGCGTACCCTTTCGAGGATCCAGCAGATCCTAGAAATTTTAGGAAAACGATTGGTGTAAGTTAATTATTATCAGTTTCAATCTTTGATTTTAAAGAAATATATGTCAATATCATGATACTCCAGAAGAAGAAAATTCCAAATAATCTTCGGTCATTGCAGAAAATTATGAGTGTTCAGTACTACATCCCTGATTATGTTCGAATATCTCCTGCTTGCAAACACCTTCTCTCTCGGATTTTCGTAGCCAACCCATACAAGGTAATTTTTCATATTTTTTTACAGAAAATTTCAGATTATATATCACTTATAGTACATGAAATAACATTTTTTTTCATTTGTTTAGAGAATCACTATAAGGGAGATAAAGCAACACCCATGGTTCTTAAAGAACATGCCTAGGGACTTAATAGAAGGGGAAAGAACAAGATATGAGCGTAACAAGCCTACTCAAACTGTGGGTGAAATCATGAAAGTAATTGAAGAGGCAAGAAGAGTAGCACCAGTTCATAAGCCAATTCAAAGTTCATCCTTTGCCTCCTCGGTAATCAATGTTGAAGATTCTGATTCAGACTCTGAAATAGAGTATGTTGATGCGGAGGGTAGTGGCGAGTTTCTTGAACTTGATATATGCAAGTATTAATTAGTAGCTAGTATTGATGAGAAATTTGAAGATTAGCGAGTTCTTGTTGTTAAGTATTGTCGTGTATGTAAATAGGCTATTATTTTTGGTTGGTCAACCAAGATGAAAGGGAGTTGGCTTGGATTCGGACCTAATAATGGCTTATGTTTGCAGTTTGTTTTGAATTGTAAATTTTATTTTATAAATTATCTTCACGTATTATGTAAATTTTATTGTATTAACCAAGAGCGCCCAGGCAATAACGGAGGTTTGCTATGGTCGAC

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020241649.1	7.0e-162	serine/threonine-protein kinase SAPK3-like
Swissprot	A2ZAB5.2	1.5e-140	stress-activated protein kinase 3
trEMBL	A0A6P8CNR5	8.4e-149	serine/threonine-protein kinase SAPK3-like isoform X1

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G08590.1	74.11	1e-138	489	ASK2;ASK2;SNRK2-1;SNRK2.1;SRK2G	SNF1-related protein kinase 2.1

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC2G01147	AT5G08590.1	309	77	1	4	309	3	311	74.11	1e-138	489
AfisC2G01147	AT1G10940.1	307	69	2	4	306	3	309	76.22	3e-138	488
AfisC2G01147	AT1G60940.2	315	78	2	4	314	3	317	73.97	3e-137	484

Ortholog group

Species	Genes
Allium cepa	g440833.t1
Allium fistulosum	AfisC2G01147
Allium sativum	Asa5G00500.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	5	261	234.5	1.2e-69

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0005515	F	protein binding
GO:0003729	F	mRNA binding
GO:0042742	P	defense response to bacterium
GO:0005829	C	cytosol
GO:0035556	P	intracellular signal transduction
GO:0005524	F	ATP binding
GO:0005634	C	nucleus
GO:0005985	P	sucrose metabolic process
GO:0006636	P	unsaturated fatty acid biosynthetic process
GO:0040007	P	growth
GO:0009414	P	response to water deprivation
GO:0009651	P	response to salt stress
GO:0009739	P	response to gibberellin
GO:0009789	P	positive regulation of abscisic acid-activated signaling pathway
GO:0009931	F	calcium-dependent protein serine/threonine kinase activity
GO:0010029	P	regulation of seed germination
GO:0019432	P	triglyceride biosynthetic process
GO:0046777	P	protein autophosphorylation
GO:0048366	P	leaf development
GO:0048527	P	lateral root development
GO:0070300	F	phosphatidic acid binding
GO:2000377	P	regulation of reactive oxygen species metabolic process
GO:0080022	P	primary root development
GO:0080167	P	response to karrikin
GO:1902456	P	regulation of stomatal opening

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K14498	SNRK2; serine/threonine-protein kinase SRK2	EC:2.7.11.1	MAPK signaling pathway - plant	ko04016
K14498	SNRK2; serine/threonine-protein kinase SRK2	EC:2.7.11.1	Plant hormone signal transduction	ko04075

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network