result

Gene information

Detail information of AfisC2G01152

Location

Gene	Chr	Start	End	Strand
AfisC2G01152	chr2	156831076	156834063	-

Sequences

CDS

>AfisC2G01152
ATGTCGTCCTCTCCTCCCGAATCAAGCCTCATGACCGCTCTTGTCCCCACTATCGCCTCCCCTTCTCCGATTACTGCTCTCCCCGCACAAACCCCCAACAACCCTATGCCGATCCGCCGCGGTCTCCCTCCTCCTTGTTGGACCAACGACGAAACGGTAGCCCTCATCGACGCCTACAAGGAAAAATGGTACTCCCTCAACCGCGGCAACCTCCGCGCCGCCCACTGGGATGAGGTTGCCACCGCCGTCACCGACCGAACCTCCCACCTCCCCGCGTCCACCCCCAAGACCTCCGTCCAGTGCCGCCACAAGATCGAGAAGCTTCGGAAAAGGTACCGCTCTGAGCTCCAAAAGTCTTTGAATCACAACCCAAACGCTCATCTCCCTTCTTCTCCATGGATCTTCTTCAAGATCATGGATCAAATGGAGAATCCTAACCGCCCTCCTCCTCCTCCTGCTCCCACTCCTTCTCCTCCTACTCATTATACAGCGATCCCGCTCAGTTACGATTACACCCCAAATGAAGATGATTCAGAGAGGAGATTCTACCAAAGACCCGATATTGCTGTCAATAACAGCAATGGTAGGAGCAGCGGCATCAGTAGTGGTTTAAAGTTCAAGATTCCAAATTTTGGTGGAAAGAGCAAGGACAACATTCCTATGGGGATACCAAATTTGAATCCAGGCTCGAATCCCCAAAATTTTGCTTCTGGCATGAAAGCGGGGTTAGACGAGATGAGAAGGAGACTGGATGCGAAGAGGAGGAGAGAAGAGAACCAATATGATGACAGCGAGGATGAATGTGATGATAGTGATAATGGAATTAAGGAATTGGTAAGGGCGATTAGAGGTTTGGGAGAAGGGTATTTGAGGATGGAGCAGATGAAGATGGAGATGGTGAAGGATATAGAGAGGGCGAGGATGGAGATGGAGTTGAAACGGACGGAAATGGTGCTTGATACACAGAGGAGGATTGTAAGTGCTTTTGTTAACGGGGTCGGCGGTGATGCTAAGAAGATGAAACAATCTCCAAATTGA

Protein

Gene

>AfisC2G01152
GTATTAGGTTCCTCTACTTCCAAAATAATTTAACGAAATCAACAACTCAGCCACTGCCCTACACGCAAAGGCGGTCAACTCACCACCCGGTGGGGGCGCCACCCACTCCAAACCTACGGTCCCCAACCCCCATACCCTCCCCTCACCGCCCCCACCCTCACGGTAACCTTACCCCCTCCTTTATATAACCGCCCCACCCTCTCCTCCTCCCCTCACCTCCCAAATCTCAAATCCCTAAATCATCAAAAATCCCCGAAATGTCGTCCTCTCCTCCCGAATCAAGCCTCATGACCGCTCTTGTCCCCACTATCGCCTCCCCTTCTCCGATTACTGCTCTCCCCGCACAAACCCCCAACAACCCTATGCCGATCCGCCGCGGTCTCCCTCCTCCTTGTTGGACCAACGACGAAACGGTAGCCCTCATCGACGCCTACAAGGAAAAATGGTACTCCCTCAACCGCGGCAACCTCCGCGCCGCCCACTGGGATGAGGTTGCCACCGCCGTCACCGACCGAACCTCCCACCTCCCCGCGTCCACCCCCAAGACCTCCGTCCAGTGCCGCCACAAGATCGAGAAGCTTCGGAAAAGGTACCGCTCTGAGCTCCAAAAGTCTTTGAATCACAACCCAAACGCTCATCTCCCTTCTTCTCCATGGATCTTCTTCAAGATCATGGATCAAATGGAGAATCCTAACCGCCCTCCTCCTCCTCCTGCTCCCACTCCTTCTCCTCCTACTCATTATACAGCGATCCCGCTCAGTTACGATTACACCCCAAATGAAGATGATTCAGAGAGGAGATTCTACCAAAGACCCGATATTGCTGTCAATAACAGCAATGGTAGGAGCAGCGGCATCAGTAGTGGTTTAAAGTTCAAGATTCCAAATTTTGGTGGAAAGAGCAAGGACAACATTCCTATGGGGATACCAAATTTGAATCCAGGCTCGAATCCCCAAAATTTTGCTTCTGGCATGAAAGCGGGGTTAGACGAGATGAGAAGGAGACTGGATGCGAAGAGGAGGAGAGAAGAGAACCAATATGATGACAGCGAGGATGAATGTGATGATAGTGATAATGGAATTAAGGAATTGGTAAGGGCGATTAGAGGTTTGGGAGAAGGGTATTTGAGGATGGAGCAGATGAAGATGGAGATGGTGAAGGATATAGAGAGGGCGAGGATGGAGATGGAGTTGAAACGGACGGAAATGGTGCTTGATACACAGAGGAGGATTGTAAGTGCTTTTGTTAACGGGGTCGGCGGTGATGCTAAGAAGATGAAACAATCTCCAAATTGAGCTTTATTGGTTAGTTTTTGCTTTTTTGGAATTTGTATAAGTAGACTGTGTTTATAGGTGGTTGGGGATTATATGTGAGTTTGTAGGTACTTGGAGACTTATTTTAGATTGTTGCTCTTTCGCATGACCGTGTTGACAATAATTTATCTCATTCTTATGCAAATCACATTCAACTTTTATGCTTAAAGTGTTTCACCTAGAAACATCTAGGTGTATCATTAAGTGAACTTGATAAGTTCTAGAATTGGGATTCTATTGCGATCTAATACTTTCATGATTCTTCGTTCTGAATACTCAATCTTATAACATATGTTCATATTGTAATTTTTTGATTTCTATTGTTTTAGAACAACTATCTTAGAGCATCTCAGGCAGGATCAAAAGGAAAAAGAAAAGGCAAATCCATACTTGTTTTTTATTCTCCATGCTACAGAAGTGTCGATTTGAGCATGGAGAATGAGAAAAGCGGAGATTTCCTCCATTTTCGTTTATGATATAACCGGTTTTAGAAAGTTGGTTGTAGTTTTTCAGAAAAAATAAAAAAGGCTAATTCCTCACACTTCTTTTGTGAAGAAGTGGGAGGAATCCATGCTTTTAAATTGCTTCCTACATTGATTTTCCCAACCGGCTAGAGATGCTCTTATAGGTTAGCTGAAGATTTGGTTTAGATAGTATGCTTTTGTTATCCATCACACTGCTATTTACTTTGATATCCTTTTGTTCCTGTGCTTTTATTGTTCTTATAATACTGCAGCAAATAATGTGAAATGGAAAGAAAAAAGAACTCAAGTTTTCCATTTTCGTTACAAGGTATTACACCCATATTTTGAATACTTTGGATTCACAAGGTTGCAAATACATTTATTGCGAACGGGTTAGTGATGGCAAAGCAGTCATTGATCTGAACGGAACAATAGAAATCTAAATATTAGTCTGCACTCAGCTGTTCATGAATTCTTATTCCAAACCTGAAAGGTTATTGGCTTAATAAAAGTACCTTTTTTAGCCATTTAAAGCAGAAAAATTAATTTGGGTGGGTAAATAATTGATGATATCTGAAAGCAATTGTTTTTTGTTTCATTTTGGACTTCGAAAGGGGAGATTTGATTGATGTCATCTTTATTTTTTACAACTTGTAAATGATGTGTTGACAAATGACAAGTTTAATTTTTGATTTTTAAAAGCCAAAAGATTTCACCAAGAGGAAAGACAGAATAATTGGACCATTTGCAAGGCAAATTTGTGAAATATAAAATATATTTAAATAAAAATCAGCTTATCTAATATACAAAAGCTGTCAAAAACTGTAAAATAATGTCATTACATTGATGATGTGCTTGTTTATGGTCACAGAAAGACATAATTGGGCGGTCGATCAATACCCAAATATCCGAAAATCCGTTTGGATTGGTACTCGAGAAACAGAGGAGGAAAAAACAAAAACGGGGGGGAGAGAAAAGGGAAAAATGGAAGAAATGTGAATGTGATGCTATACGCATTGGGAAATTCCTCCGTTCAGTTTTTATTAGATATGGTACCGTATTTTGTGTATTTAGTGCAATTGGTGATTGGGAGTTGTATTACTTTTCATGTTTTAGATACAAATATTATCTATATTATTATATTATTATTGAGTTGTATTCTAAGAGAAGGCGATTCTCTAATTAATTGCTCTCATCGCTTAAATGAAAAA

Functional annotation

Database	accession number	e-value	annotation
nr	PKU81902.1	3.4e-39	hypothetical protein MA16_Dca003919
trEMBL	A0A8T3AVD5	2.4e-39	Myb_DNA-bind_4 domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G44730.1	38.10	2e-40	163		Alcohol dehydrogenase transcription factor Myb/SANT-like family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC2G01152	AT2G44730.1	315	159	13	40	333	57	356	38.10	2e-40	163
AfisC2G01152	AT3G24860.1	311	169	13	22	331	44	304	29.26	4e-26	115
AfisC2G01152	AT3G14180.1	362	191	12	23	325	60	404	26.24	9e-22	101

Ortholog group

Species	Genes
Allium cepa	g119024.t1
Allium fistulosum	AfisC2G01152
Allium sativum
Arabidopsis thaliana	AT2G44730.1
Oryza sativa	LOC_Os08g37810.1; LOC_Os10g41460.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF13837.3	Myb_DNA-bind_4	Domain	45	142	71.2	6.4e-20

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0005773	C	vacuole
GO:0005576	C	extracellular region
GO:0005249	F	voltage-gated potassium channel activity
GO:0005634	C	nucleus
GO:0006813	P	potassium ion transport
GO:0008076	C	voltage-gated potassium channel complex
GO:0009987	P	cellular process

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network