result

Gene information

Detail information of AfisC2G01288

Location

Gene	Chr	Start	End	Strand
AfisC2G01288	chr2	177354087	177357430	+

Sequences

CDS

Protein

Gene

>AfisC2G01288
ATGGGAAACTGCTGTGCATCGCCAGTTGAAGCATCGGAGCAACGACCGCCGAAACAAAAAAAGACGAAAAAGCCTAATCCTTTCTCAATCCCATACAACAACGCTACAACTTCCTCAAACAAGCTCACCGTCTTGAACTCTCCGACCGGCACTGATATCCTCCACCTCTACGAACTCGGCTCCGAGCTTGGCCGCGGCGAGTTCGGAGTTACATATCTCTGCACCGAAAAAGCCACCAGCGATCTCTACGCCTGCAAGTCCATATCAAAGAACAAACTCAGGACATCGATTGACGTCGAGGATGTTAGGAGGGAGGTCGAGATCATGCGGTCGATGCCGCCGCATCAGAATATTGTGAGGTTGAAGGAAACGTACGAGGATGATAACGCTGTGCATTTAGTAATGGAGCTTTGCGAAGGAGGAGAGCTTTTTGATCGGATTGTTGCGAGGGGGCATTATACTGAAAGAGCAGCTGCTGCTGTTACAAAAACTATCGTGGAGGTTGTTCAGGTGAGGAAAATGCTGGATCTTTATGTGTAGATCTGACAATTTGTAAATTAAGACTGGAACTTGTTGCTTCAGATGGGCTGATTGATAATAACGTATTGTGATTTCGTTTCAGATGTGCCACAAGCATGGAGTGATGCATAGGGATCTGAAGCCTGAAAACTTTTTGTTTGCAAATAAGAAGGAAACCGCTGCACTCAAGGCGATTGACTTTGGGTTGTCAGTGTTCTTCAAACCTGGTACATACTCTACTTATTGTACATATTCTAGTGGTTTTCAGCTATCATGTATTTTACGGGAACAGTATATTTTCTTATTATGTTTGTTTGTAATAATGCAGGTGAGAGATTCACTGAGATTGTCGGCAGTCCTTACTACATGGCACCTGAGGTTTTGAAAAGAAATTATGGGCCTGAAGTCGATGTTTGGAGTGCAGGAGTTATACTGTACATTTTGCTCTGTGGTGTTCCACCATTTTGGGCAGGTATATTAAATAACGATCTTAACTGGGTAGTTAGTTGCATACTTACATTACAGTGAAAGCATGTTAGTTTAGGGAAGAGATTGAGATTTAATTGATTATTTTGTGTATAGAAACTGAACAGGGAGTTGCACAAGCTATTATTCGTTCTGTTGTAGACTTTAAAAGAGATCCATGGCCTATAGTTTCGGATAATGCAAAAGATCTTGTTAGGAGAATGTTGAATCCGGATCCCAAGAAGCGGTTAACAGCTCAAGAAGTATTAGGTATTCTTTGTTCTGTTCAGCATATTTCACTTTCGGAAGTAGGCACATGATGTAAAAGCTTAGGTAGTTGTAGTCATGCATATGGCAATAACAAGGCTAAATGACATTGATTCTGGAGTCTATAAGTTCGGTTTACTTGTTTTGGAACCGAACTGTTTTTGTTAGAACTAGCATTTCAGTTCATTTTAGTGATAATTGTTGAAAAAAATGCACTCCCCTGATTCAGAATATGACAATGCCATGTTATTTACTAGTACCTTAAGTTTCTACTTCAGTTCTTAGTGCATATTGTCTAATACTGTTTTTCCTTCTTTGTATGCACATTATAGATCACCCGTGGTTGCAAAATGCTAAAAAAGCACCTAATGTTAATCTTGGCGAGACAGTGAAAGCTAGACTTCAACAGTTCTCAATGATGAACAAACTCAAAAAGAGAGCACTCAAAGTATTATTTCGTTTTTCTTTATCTTGGCACATATATGCAAACTTCTATGTTGTTAACTTTTAATTTTCTTGCAGGTGATTGCTGAACATTTGTCCGTCGAAGAAGTTGCAGACATCAAGGATATGTTCTCAAATATGGATGTAAACAATAATGGCAAAATAACACTGGAGGAGCTGAAACATGGTCTCAACAAACTTGGTCATCAAATTCCAGATGCTGATGTTAAAATACTAATGGATGCTGTAAGTTTCATATGATATTAACAGGTTGAGCATTATATTTAATCACACCTGTAAAATTTAGAACATTGGTCTTAATTTACGTGTACATGCCAATTTGGGTATATTTCATCTTTTACGTGCTAAGCTACCAATACAAATGCTATGTGTAACCATTCTTGGAGTCTTGTAATACACTGCATTGACACATCACACTATTTACTGTTTCAAGTTGTTTAGGAATAAAATTGTTACATTTTGCATCAGGTTCGATGAGACTGCCTTTCACTGATTCCGGTTTAGTCTTGCTATTTTTGTTTTCTAAATCTAAATACATATCAAATTTATTAGGAAAACGTGATTCATTTGTCTATTACAACGTTAATTGACAGGCTGATGCTGATGGAAATGGAACACTGGATTATGGAGAATTTGTTGCAGTTTCAGTTCATCTCAGAAAGATAGGAAATGACGAGCACTTGCATAAAGCCTTCACATTCTTTGATCAGAACAAGAGCGGATATATTGAAATTGAAGAGCTCAGGGAGTGTTTAGCCGATGACCTTGCAGCGAATCAGGAGGAAATTATTACTGCTATCATCCGCGATGTAGATACTGACAAGGTAAAGTACTTATGTTATTCCTACCAATTTGTCCAATACCAAAACATCTTGATTAAAAAAACTGTACATTAGCTACATTATCACAGTGAATGTATTACAACTTCCATTCAAGTATAACTGATTTGCTCAGGTAGAACACATACATGCCATAAAACCTATAGCACCCGACTTCCTTTCTTCACCGGGTGCAGTGTCTTTAAGAGCATAAGACCATTTACATTCCCTATATTTTGACGATTATTTCATAAATTGCACTTGAATGCCAGGATGGAAAAATAAGCTACGAAGAGTTTGCTGCAATGATGAAAGCTGGAACAGATTGGAGAAAAGCATCAAGACAGTACTCACGAGAGCGATTCAACAATCTCAGCTTAAAACTCATGAAAGATGGATCCTTGCAGCTTGCCAATGGGAGTACAAGATGAGGGAATAGCAGTCATATGCGTATATGTTTGTGTATGGTTCCTTCACATGAAGTAACCATATTGCGATGGCAAGATTTACAAAGGTTCATTCAGTTATTTCTCTTGTACTGATTTGTTTAGTCCAAATTGGGGTATGAGATGGTTAATTTAACATGCTATTGTACGTATCTTACTCACTTGTGAGAGTGCCCAGGTTAAAATTTGGTGAGGGCGTTCTTTTGATTGTATATATGTATGTTGCAGTTTTTTTAATACAAAATGGAAGCAGTTATAACCCAAAAAAAGGCAATATGTAGTACTTTTCATCTTAGTTGACTAGCTTGTCCGTTATTATTTGTAACCTGTAACGGATCAGTATTAACTAATTACTTGTTATTTT

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020257982.1	7.8e-269	calcium-dependent protein kinase 20-like isoform X1
Swissprot	Q84SL0.2	1.8e-246	Calcium-dependent protein kinase 20
trEMBL	A0A5P1FFQ9	5.6e-269	Calcium-dependent protein kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G19450.1	77.21	0.0	855	CDPK19;CPK8	calcium-dependent protein kinase 19

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	bit score
AfisC2G01288	AT5G19450.2	531	116	4	1	528	1	529	77.21	855
AfisC2G01288	AT5G19450.1	531	116	4	1	528	1	529	77.21	855
AfisC2G01288	AT5G12480.1	536	112	6	1	528	1	531	76.68	850

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	57	315	259.5	2.9e-77
PF13833.3	EF-hand_8	Domain	375	425	37.2	1.7e-09
PF13499.3	EF-hand_7	Domain	433	496	48.7	7e-13

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0005509	F	calcium ion binding
GO:0005739	C	mitochondrion
GO:0005773	C	vacuole
GO:0005829	C	cytosol
GO:0004683	F	calmodulin-dependent protein kinase activity
GO:0004698	F	calcium-dependent protein kinase C activity
GO:0035556	P	intracellular signal transduction
GO:0005516	F	calmodulin binding
GO:0005524	F	ATP binding
GO:0005634	C	nucleus
GO:0009506	C	plasmodesma
GO:0009507	C	chloroplast
GO:0009651	P	response to salt stress
GO:0009738	P	abscisic acid-activated signaling pathway
GO:0010119	P	regulation of stomatal movement
GO:0010359	P	regulation of anion channel activity
GO:0018105	P	peptidyl-serine phosphorylation
GO:0046777	P	protein autophosphorylation
GO:0080092	P	regulation of pollen tube growth
GO:1901979	P	regulation of inward rectifier potassium channel activity

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K13412	CPK; calcium-dependent protein kinase	EC:2.7.11.1	Plant-pathogen interaction	ko04626

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network