result

Gene information

Detail information of AfisC2G01310


Location
GeneChrStartEndStrand
AfisC2G01310chr2181299804181340226-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_009411323.13.5e-132PREDICTED: BEL1-like homeodomain protein 4
SwissprotQ9SW80.31.3e-107Protein SAWTOOTH 1
trEMBLA0A804K0Z82.6e-132Homeobox domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score		gene aliasesShort description
AT2G23760.160.858e-124 441BLH4;SAW2BEL1-like homeodomain 4

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag35466.t1
Allium fistulosumAfisC2G01310
Allium sativumAsa5G01576.1; Asa5G01577.1
Arabidopsis thalianaAT2G23760.1; AT2G23760.2; AT2G23760.3
Oryza sativaLOC_Os03g52239.1; LOC_Os03g52239.2; LOC_Os03g52239.3

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF07526.8POXDomain241378180.91.5e-53
PF05920.8Homeobox_KNFamily44848765.33e-18

Gene Ontology
AccessionOntologyName
GO:0000978FRNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0001077Ftranscriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding
GO:0001525Pangiogenesis
GO:0001752Pcompound eye photoreceptor fate commitment
GO:0002089Plens morphogenesis in camera-type eye
GO:0003682Fchromatin binding
GO:0003705Ftranscription factor activity, RNA polymerase II distal enhancer sequence-specific binding
GO:0005829Ccytosol
GO:0005634Cnucleus
GO:0005667Ctranscription factor complex
GO:0007383Pspecification of segmental identity, antennal segment
GO:0007420Pbrain development
GO:0007422Pperipheral nervous system development
GO:0007432Psalivary gland boundary specification
GO:0007476Pimaginal disc-derived wing morphogenesis
GO:0007479Pleg disc proximal/distal pattern formation
GO:0007480Pimaginal disc-derived leg morphogenesis
GO:0007525Psomatic muscle development
GO:0007626Plocomotory behavior
GO:0008134Ftranscription factor binding
GO:0008285Pnegative regulation of cell proliferation
GO:0009610Presponse to symbiotic fungus
GO:0009640Pphotomorphogenesis
GO:0009737Presponse to abscisic acid
GO:0010051Pxylem and phloem pattern formation
GO:0010076Pmaintenance of floral meristem identity
GO:0010077Pmaintenance of inflorescence meristem identity
GO:0010089Pxylem development
GO:0010092Pspecification of organ identity
GO:0010154Pfruit development
GO:0010197Ppolar nucleus fusion
GO:0010201Presponse to continuous far red light stimulus by the high-irradiance response system
GO:0010223Psecondary shoot formation
GO:0010227Pfloral organ abscission
GO:0010228Pvegetative to reproductive phase transition of meristem
GO:0010229Pinflorescence development
GO:0010371Pregulation of gibberellin biosynthetic process
GO:0014036Pneural crest cell fate specification
GO:0045892Pnegative regulation of transcription, DNA-templated
GO:0034504Pprotein localization to nucleus
GO:0035326Fenhancer binding
GO:0035855Pmegakaryocyte development
GO:0042659Pregulation of cell fate specification
GO:0042803Fprotein homodimerization activity
GO:0045638Pnegative regulation of myeloid cell differentiation
GO:0045665Pnegative regulation of neuron differentiation
GO:0045944Ppositive regulation of transcription from RNA polymerase II promoter
GO:0046982Fprotein heterodimerization activity
GO:0048457Pfloral whorl morphogenesis
GO:0048510Pregulation of timing of transition from vegetative to reproductive phase
GO:0048735Phaltere morphogenesis
GO:0060216Pdefinitive hemopoiesis
GO:0060323Phead morphogenesis
GO:0072002PMalpighian tubule development
GO:0080006Pinternode patterning
GO:0090098Ppositive regulation of decapentaplegic signaling pathway
GO:0090470Pshoot organ boundary specification

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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