result

Gene information

Detail information of AfisC2G01393

Location

Gene	Chr	Start	End	Strand
AfisC2G01393	chr2	194291554	194293740	+

Sequences

CDS

Protein

Gene

>AfisC2G01393
ATGTCATTTGTAATCTCAGTTCTTGAAGCAGGAGGCAACCGGTTTGAGGCAACAATTGTGTATCATTCTAGGAAATCCATGGCTCTCCTCCATGGTAAACCTTTACAGTCTGTTACAATAATTGGGCTCAGTGACATTTACACGTAGATTCATTGCATGAGTAACAATTTAACCTTCTAGGATCAATGACCACAACTTTTCTTACCAAAAATACATTTAAGAATGTTTTGAGTACCTTCACCATTTAAATACAAGAATTGACATGGTAATGCTTTGGTAATTCAGTTAATACTTACTAGAACCTAAAGCGACACTTAGATAAGAGACATAACTATTCTGATTGTCATTTTAGTGTTTGTTCTTGATTTCTTAACCAACATAATTTTTGTTCAAATTGTACCTTTTAATTTTGGTTAATCTTCTGCAACATATTAAAGCAATTTATGTACAAAAGACATTACATAAAATATTTCATAAAATTGGTGGAAACTATATTGCTATGAAAGATTGCTGATGCATTTTCAAAAGTCCAAAACAACTAACTTGTGAAGCTATTAAATTAAAGTACTATATTATGTTTTTTAAGAAATTCAAAGTGCAACCTCAAAAAACTGAGTCTATGATATATATGTAATAGATCAACTCTGTTTGTATTATGATTTCTGGCTTTGCATTCATGTTCATTGAACATAAACGTGTACATGCAATTCAAAAATTAATCCAAGTTACCACATTTTAGATATCAATCCAAAGCAATGGACAATAAACATTTAAAGATGGGACCAGCTACAATCCCAATCTAAGGCCGAAATGGCTAAAATATCAACAATACAATATTAAAATGTAAATTACATTTTAGTCGATCACAGAAATGATTTTCAGTATAAACAATACAATATTAAAAAATGTTTGTGCTGATGTACACTACAAGCACAAAGGTTTAATTGATGGAATTGTGATTGTGCATATACAGGGAAATTATGCACAAAATTCAACATTGGATTATGATCTAGGAGCAGCAGGAGACTTATTCAAAGCACCAGAACCAGTTATGATGGAAGAACCTCTAGTCACATTAGATCCTCTAAGTGCTGCCTTGACTATCATATCAAACGGACAAGATGTGATGACTGATACATTCGAAGTTTCTGACATGATCGAGTCCTTGCAAAATGAGCAGCTTAACGACGTGTTCAATGAGTGCAAGAAGGAGCTTTTAGCTAAATACACAATCAATGATAGTTTAAATGAAACAGCACCAAACGCTAATGAAGTTCCTGTTCAGGGATGCTTTAGTTCAAATGCAGGACATTTACAAAAAAGCGTGAGCTCTGGGTGTCTTAATTCTATGGATTGGGTTAGTGATGGTTTTAGTAGCCTTGGACATAACCTTTTAGACTTCCCAAGTGCCGATTTCGAAACTGCATTTGGGTTAAGAAGAACATGCAGTGAAGGTGATATTCAGGTCGGGAGCTAAGCCGATTTTCCAATTCAAGATATTTGTCCATATTTTTGTTGTATTTAAAGCCTATTTACGTACAGTCTCTAGGGAACAAAGGATTTACGAGCAGCATGCCTACATCCTTTGTCAGACAACTGACCATCAGCGAACTGAAGTCTGAACAACGAATGCAGAAACTTTCCAGATATAGAGATAAGAAGAACAAGAGAAATTTTGGAAGAAAAATCAAGGTAAAACTGCTACAACATCCCAGATTAGATGATATTTAAATTTACGAAAAATTAAATATTGCAATGACTGATGGTATACGTGTCTTGTTTGCAGTATGCATGTAGGAAGGCATTGGCGGATAGCCAGCCTCGAGTCAAAGGAAGGTTCGCTAAAACTGAAGATGGGGGAGGTCTCAAAACAAGTTGTGTGAAGGTGTTGTAGCTGGTTGTAGAGGGGGTTAGGCAGAACAGTGATGGTTCTGCTGGCAGTAAGTTGAGTTCAAGTTGTGGTGATTGATGATGGTACAGTTTGCAAAAGTGATGTATGTATGCAGGATGTCAGTATGGTGATGTGCAGATGTTTGTAAATGTTGGCAAGTTGAGGTGTATGTCAGTGATTTTGTGGTAGATTTTGTATGGGTTATTTTTGTGAAGATGATGTATGGAGTTGTCGGAGGATGGGTAATGGTTGATGAAGACTTGTGGTTGCTGGTTGCTAGTTGTGAAGTGCTGTAG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020264063.1	3.9e-74	uncharacterized protein LOC109839993
Swissprot	O82117.1	3.7e-05	Protein CONSTANS-like CO3
trEMBL	A0A5P1EXA4	2.8e-74	CCT domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G53420.1	46.96	4e-46	182		CCT motif family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC2G01393	AT5G53420.1	230	106	9	53	280	47	262	46.96	4e-46	182
AfisC2G01393	AT4G27900.2	241	97	10	53	280	44	258	43.57	2e-40	162
AfisC2G01393	AT4G27900.1	241	97	10	53	280	44	258	43.57	2e-40	162

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF06203.11	CCT	Motif	236	278	63.9	8.9e-18

Gene Ontology

Accession	Ontology	Name
-	-	-

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network