Detail information of AfisC2G01492


Location
GeneChrStartEndStrand
AfisC2G01492chr2208954077208960196+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020244430.11.3e-06zinc finger protein ZAT6-like
SwissprotO22533.15.1e-08COLD INDUCED ZINC FINGER PROTEIN 2
trEMBLA0A2K1R5322.1e-06C2H2-type domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G27730.139.103e-1887.8STZ;ZAT10salt tolerance zinc finger

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag457799.t1
Allium fistulosumAfisC2G01492
Allium sativum
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF13912.3zf-C2H2_6Domain295350.71e-13
PF13912.3zf-C2H2_6Domain7810233.42.7e-08

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0005634Cnucleus
GO:0009409Presponse to cold
GO:0010200Presponse to chitin
GO:0045892Pnegative regulation of transcription, DNA-templated
GO:0042538Phyperosmotic salinity response
GO:0043565Fsequence-specific DNA binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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