result

Gene information

Detail information of AfisC2G01502

Location

Gene	Chr	Start	End	Strand
AfisC2G01502	chr2	210213543	210218346	-

Sequences

CDS

>AfisC2G01502
ATGCAAAAACCAAAAGGAGTGAAACCTGAGACCACAACTGTTTTCAACTGCCATACAAGTATTATAGCATCAGACAAGGATGTTCTACTCGAACTCAAATCATTTCTACTATCAACAAATCGAGTAAATCAAGGCAGATATGCACTATGGGACAAGGCTGAGAAAAACCTATGCAATTGGCACGGCGTAACTTGCAATTCATTCAATCAAGTTACTGGACTCTATCTCAGTGATTCGATAATTGCAGGAAAAATATATACAAATTTCTCAAAACTTACATGCCTGACTCACTTAGATCTCTCCAACAACACAATTGATGGCTCGATTCCATTCGACTTGAACAAGTGTGTCAACCTTCAATATCTGAATCTTTCTCATAATCTCATATCTGGTCAGTTGAATTTATTTAACTTGACGCGGCTGAAGATTTTGGACGTAACTTTGAATCGCTTTAATGGTGAGCTAAGTCCTAATTTCCCATCTTTATGTACTAGTTTGGTTACTCTCAATGTCTCTATGAACAATTTTACGGGCCCGGTAATGGGTCTGTTCGACAAATGTTTGAAGCTGAAACATCTTGATCTAAGTTCAAATCAATTTTATGGAGAGATTTGGAAAGGGTTTGATAAGTTGGAGGAATTCTCAGTTGCTGAAAACAATCTTAATGGCAATATTTTGCCTGGGACATTTTCATCCAAGTGTAATATGCAAACTTTAGATTTATCTGCAAATGCTCTCAGTGGTAATTTTCCAAACTCGATATCAAACTGCAAGAATTTAACAGTACTGAATTTGTGGGGAAATCACTTCAATGGAGTTATTCCTAATGGGCTTGGATTGCTATCTGATCTCACATTATTATTTCTGGGAAATAATAGTTTCGACAGAGATATACCTGAAACTCTACTGGACTGTAAAAAACTTGTCTTCATTGATCTTAGTAGAAACAACTATGGTGGAGAAATTCAACCAATATTTGGAAGATTCACTGGTTTAAGATTCCTGCTTCTGCATTCAAATTATTACAGTGACGGAATCGAAAGCTCAGGGATTTTATCTCTACCAAACCTAGAAAGACTAGACTTGAGTTTCAACAATTTATCTGGACAACTTCCAGTACAGTTTTCTGAAATGCCCAAACTCAAATTCTTGATTCTTGCAAACAACAGTTTTTCTGGAAATATACCTTCCGAATATGGATCCATGACCTCTCTCCAAGCATTAGACATTTCATTCAACAATGTTTCTGGAAACATTCCGAAATCTTTTGGAAATTTAACATCTTTACTATGGCTAATGCTTGCCAATAACCAATTAACTGGAAGCATTCCAGAAGAAATTGGAAACTGCAAAAGTTTGCTATGGTTAAACCTTGCTAACAACTCTTTATCAGGTAACATACCAGCATCAATTACTCAAATCGGGTCGGATCCTGAATCCACTTTTGAGAAAAATAGGATCGATGATGTCAGTGTGCCGGCTGGCTCAGGCGAATGCTTAACGATGAAGAGATGGATTCCGGCAAGTTATCCTCCATTTAGTTTCATTTATACTTTGATGACGCGGAAAAGCTGCAGAGATACGTGGAACAAATTGCTGAAAGGATATGGCGTTTTTCCGATATGCCTAAATAATTCTTCGAGGATAACGATTTTTAAAATATCAGGTTATTTGCAGCTTTCAAGTAACGAATTATCCGGAACAATTCCTAATGAAATTGGAGCAATGAGGCATATAAGTCTGCTACATCTTGATATGAATAGATTGTACGGACATCTGCCAGGAGACATCGGGAACTTACCTCTTGTCGTCTTCAACATGTCAAAAAACAATCTTTCTGGTAAAATTCCGACGGAGATCGGTAACCTGAAATGCTTGCAGAGTCTAGATATTTCATACAATAACTTTTCGGGTGACTTTGTAGATAGTTTGAATCAGATATCGGATCTCGATTTGTTTAACGCATCTTACAACCCATTGCTATCGGGTATTGTTCCGATCAGTGGACAGATTGCAACTTTCGGTCCGGATTCTTATATTGGAGATCCCTTGATTCAATTTACAGCGGGAACTCGTAGCAGTCCTCCGCCAAAAATGGAACTTACTAGTCGTCGGCGGACTGCTTGGACAGCGGCGGGTTGGATTCTTCTAGCGGTTTTGGTAGTGGTAGTTCTCTGGGGAGGTTTATATGTTCTGATTCACTGGTTTAGTGACGTGGACAAATCTGGAGCGTCCAAAATATTTGAAGATGTAAAGGTGTTTCAAATGGGAAATGCAGGTTTTAATTATTCGGATATTGTGAAGGCCACTAGAAACTTTTCGGATGACATGGAGATTGGCAGAGGGGGTTATGGAATCGTTTACAAAGGTGTGCTACCGGATGGTCGACGTGTAGCGGTAAAAAAGCTTCAGTCGGTTGGATGTGACGGCGAACGTGAATTCAGAGCTGAGATGGAAACGCTGTCCGATCAAACAGGTTTCGGATGGCCACATCCAAATCTAATTGTACTTTATGGCTGGTGTATATCTAGCAATGAAAAAATATTGGTATATGAATATATGGAAGGTGGCAGTTTAGAGGATGTGATCACCGACTGGAATCGGTTCGGATGGGATAAGCGATTAACAGCAGCGGTGGAAATAGCGAATGCATTAGTCTTTTTGCACCATGAATGTGAGCCTGTAATTGTGCACAGAGACGTGAAGGCAAGCAACGCGTTGTTGGATGGAGTGGGGAGGGCAAAGATGACAGATTTTGGGTTGGCGAGGATGGTGGGGATGGGTGAGAGTCATGTGAGTACGATGGTTGCAGGGACAGTGGGGTATGTAGCTCCGGAGTATGGAGTTACGGGGAGGGTTACGACGAAGGGGGATGTGTATAGTTTTGGGGTGCTGCTGATGGAGTTGACGATTGGAAGAAGGGCAATTGATGAGGATGAGTGTTTGGTAGAGTGGGTAAGGCGAGTCGGGGTGAGGGAGGTGGTTGAGAGCGTTGTGAGGGGTAAACAAGGGAAGAAAGTGATTGAAATGTGGGGGGTGATGAAGGTTGCAATTTGGTGCACGGTCGATGATCCTTGTATGAGGCCAGATATGAGGGAAGTTTTGGCTATATTGAGGAGTTTCTGGGTGAAGTATGATTCTAGTAGTAGCGGTAGCAGTGTTAGTAGTAAATTGAGTGCATTATCTCCCGACTAG

Protein

>AfisC2G01502
MQKPKGVKPETTTVFNCHTSIIASDKDVLLELKSFLLSTNRVNQGRYALWDKAEKNLCNWHGVTCNSFNQVTGLYLSDSIIAGKIYTNFSKLTCLTHLDLSNNTIDGSIPFDLNKCVNLQYLNLSHNLISGQLNLFNLTRLKILDVTLNRFNGELSPNFPSLCTSLVTLNVSMNNFTGPVMGLFDKCLKLKHLDLSSNQFYGEIWKGFDKLEEFSVAENNLNGNILPGTFSSKCNMQTLDLSANALSGNFPNSISNCKNLTVLNLWGNHFNGVIPNGLGLLSDLTLLFLGNNSFDRDIPETLLDCKKLVFIDLSRNNYGGEIQPIFGRFTGLRFLLLHSNYYSDGIESSGILSLPNLERLDLSFNNLSGQLPVQFSEMPKLKFLILANNSFSGNIPSEYGSMTSLQALDISFNNVSGNIPKSFGNLTSLLWLMLANNQLTGSIPEEIGNCKSLLWLNLANNSLSGNIPASITQIGSDPESTFEKNRIDDVSVPAGSGECLTMKRWIPASYPPFSFIYTLMTRKSCRDTWNKLLKGYGVFPICLNNSSRITIFKISGYLQLSSNELSGTIPNEIGAMRHISLLHLDMNRLYGHLPGDIGNLPLVVFNMSKNNLSGKIPTEIGNLKCLQSLDISYNNFSGDFVDSLNQISDLDLFNASYNPLLSGIVPISGQIATFGPDSYIGDPLIQFTAGTRSSPPPKMELTSRRRTAWTAAGWILLAVLVVVVLWGGLYVLIHWFSDVDKSGASKIFEDVKVFQMGNAGFNYSDIVKATRNFSDDMEIGRGGYGIVYKGVLPDGRRVAVKKLQSVGCDGEREFRAEMETLSDQTGFGWPHPNLIVLYGWCISSNEKILVYEYMEGGSLEDVITDWNRFGWDKRLTAAVEIANALVFLHHECEPVIVHRDVKASNALLDGVGRAKMTDFGLARMVGMGESHVSTMVAGTVGYVAPEYGVTGRVTTKGDVYSFGVLLMELTIGRRAIDEDECLVEWVRRVGVREVVESVVRGKQGKKVIEMWGVMKVAIWCTVDDPCMRPDMREVLAILRSFWVKYDSSSSGSSVSSKLSALSPD

Gene

>AfisC2G01502
ATGCAAAAACCAAAAGGAGTGAAACCTGAGACCACAACTGTTTTCAACTGCCATACAAGTAAGCTCAGAAGGCAAAATCTTTAAAAACAGTTGTGTTCTCAGGTCGCCCCTTCTGGTTGCTTCGTCTAATTCGCTTACAGTGTACGATGGAAGTTTCTGGAAATGTTTTTGGTCATGTGCAGTTGGATCTGCTTTTATGCGTTGTTTTTAGTTGACTTCCATGCAATCAGCTCCAACTCCACATAACCAAACATGCATCAAGACATATACATGAGTTCATTTTTGCATTGTTCCACGTTTTTATTGTGACTGACAATGATATATGTCTACTGTAGAATGGTATAAGGCTACAAGCATGCATATTTGTAATCATTTTGTGAAAATATAGAATTAGTGGCTTTTCTGGTATGAACCTTTTGTTTTCAAAAGAAGGTATGAACACTTTGTGTGAACACTGAACAAAATCGCAGTCTAATGTCCATTACTTTGACAAATTTTCTCCCATGATAAATATGTATTTATATCATAATGGGCATTTAGGTTTCACATATACTTTGTTCATGTTGAAGAATAGACAACATGTGCAGAATGTCCATGACACATCATAGACTAGTCTAAATTTAGAACCCAAATATAAATCCTATGATTATCAAGACTAATATTGACATGACTTCTACTTTGGATTAGCTTCTAATACTGTTTTTGGATATGGAAAAAGCTGAAAATGAGCACCACAAAAAATTTGGTATCTTCTGCGGATAGTTTTACACTAATCACTTTTTGCTCACAAGTGTGTATACAAATCCAGAAATAACAAAAATATTGAAATTTCGATGTTGCTCGTATTTAAAAGGGTTGTGCTAATATTATCTTTCTTTTTGTTTCAACTGCGCGTCTTTAGCCGCTAGACACGATTACATCAGACCAACACTAAGTAGCATATGTAAAGTATGCAAAACGTTAATGATAACTATACAAACCGGGAAATAATAAATTAACAATAAAAGTGACAAAATGAAGACCCGTTACTTTTCTTTGATTCCTTGTTTGAATTTGTCTCTCTAGTCTATGGTCATATAAACGCCAACTGCTGAGCTTTTTCCTCTTCTTATATAATCAATCTTAGTGGCTACGCACCAAATACTAAACTAATCTTATTATAACTTATATTTGTTTCCACTAAATAATCCCATATATTAATTAATACGCTTAATACTCTTTTGAAATACAAGCATTTCAACTACCATATCTAACTTCAAGCAAAAAATGAAGATGATCAACAATATGTAAATTTCATTTCTTTCAGACACATGATCCATAGATATGTCAAAAGCACCATGCCATATTATCATATTCTTTCTCTTAATCCAAATTTCAGGTAACCTTAGTAATCCTCATGTATATTTAGTTTTGCTACATCTAAATGGTACAGAACTAATTGAAATTTTGTGATTTTATATAGGTATTATAGCATCAGACAAGGATGTTCTACTCGAACTCAAATCATTTCTACTATCAACAAATCGAGTAAATCAAGGCAGATATGCACTATGGGACAAGGCTGAGAAAAACCTATGCAATTGGCACGGCGTAACTTGCAATTCATTCAATCAAGTTACTGGACTCTATCTCAGTGATTCGATAATTGCAGGAAAAATATATACAAATTTCTCAAAACTTACATGCCTGACTCACTTAGATCTCTCCAACAACACAATTGATGGCTCGATTCCATTCGACTTGAACAAGTGTGTCAACCTTCAATATCTGAATCTTTCTCATAATCTCATATCTGGTCAGTTGAATTTATTTAACTTGACGCGGCTGAAGATTTTGGACGTAACTTTGAATCGCTTTAATGGTGAGCTAAGTCCTAATTTCCCATCTTTATGTACTAGTTTGGTTACTCTCAATGTCTCTATGAACAATTTTACGGGCCCGGTAATGGGTCTGTTCGACAAATGTTTGAAGCTGAAACATCTTGATCTAAGTTCAAATCAATTTTATGGAGAGATTTGGAAAGGGTTTGATAAGTTGGAGGAATTCTCAGTTGCTGAAAACAATCTTAATGGCAATATTTTGCCTGGGACATTTTCATCCAAGTGTAATATGCAAACTTTAGATTTATCTGCAAATGCTCTCAGTGGTAATTTTCCAAACTCGATATCAAACTGCAAGAATTTAACAGTACTGAATTTGTGGGGAAATCACTTCAATGGAGTTATTCCTAATGGGCTTGGATTGCTATCTGATCTCACATTATTATTTCTGGGAAATAATAGTTTCGACAGAGATATACCTGAAACTCTACTGGACTGTAAAAAACTTGTCTTCATTGATCTTAGTAGAAACAACTATGGTGGAGAAATTCAACCAATATTTGGAAGATTCACTGGTTTAAGATTCCTGCTTCTGCATTCAAATTATTACAGTGACGGAATCGAAAGCTCAGGGATTTTATCTCTACCAAACCTAGAAAGACTAGACTTGAGTTTCAACAATTTATCTGGACAACTTCCAGTACAGTTTTCTGAAATGCCCAAACTCAAATTCTTGATTCTTGCAAACAACAGTTTTTCTGGAAATATACCTTCCGAATATGGATCCATGACCTCTCTCCAAGCATTAGACATTTCATTCAACAATGTTTCTGGAAACATTCCGAAATCTTTTGGAAATTTAACATCTTTACTATGGCTAATGCTTGCCAATAACCAATTAACTGGAAGCATTCCAGAAGAAATTGGAAACTGCAAAAGTTTGCTATGGTTAAACCTTGCTAACAACTCTTTATCAGGTAACATACCAGCATCAATTACTCAAATCGGGTCGGATCCTGAATCCACTTTTGAGAAAAATAGGATCGATGATGTCAGTGTGCCGGCTGGCTCAGGCGAATGCTTAACGATGAAGAGATGGATTCCGGCAAGTTATCCTCCATTTAGTTTCATTTATACTTTGATGACGCGGAAAAGCTGCAGAGATACGTGGAACAAATTGCTGAAAGGATATGGCGTTTTTCCGATATGCCTAAATAATTCTTCGAGGATAACGATTTTTAAAATATCAGGTTATTTGCAGCTTTCAAGTAACGAATTATCCGGAACAATTCCTAATGAAATTGGAGCAATGAGGCATATAAGTCTGCTACATCTTGATATGAATAGATTGTACGGACATCTGCCAGGAGACATCGGGAACTTACCTCTTGTCGTCTTCAACATGTCAAAAAACAATCTTTCTGGTAAAATTCCGACGGAGATCGGTAACCTGAAATGCTTGCAGAGTCTAGATATTTCATACAATAACTTTTCGGGTGACTTTGTAGATAGTTTGAATCAGATATCGGATCTCGATTTGTTTAACGCATCTTACAACCCATTGCTATCGGGTATTGTTCCGATCAGTGGACAGATTGCAACTTTCGGTCCGGATTCTTATATTGGAGATCCCTTGATTCAATTTACAGCGGGAACTCGTAGCAGTCCTCCGCCAAAAATGGAACTTACTAGTCGTCGGCGGACTGCTTGGACAGCGGCGGGTTGGATTCTTCTAGCGGTTTTGGTAGTGGTAGTTCTCTGGGGAGGTTTATATGTTCTGATTCACTGGTTTAGTGACGTGGACAAATCTGGAGCGTCCAAAATATTTGAAGATGTAAAGGTGTTTCAAATGGGAAATGCAGGTTTTAATTATTCGGATATTGTGAAGGCCACTAGAAACTTTTCGGATGACATGGAGATTGGCAGAGGGGGTTATGGAATCGTTTACAAAGGTGTGCTACCGGATGGTCGACGTGTAGCGGTAAAAAAGCTTCAGTCGGTTGGATGTGACGGCGAACGTGAATTCAGAGCTGAGATGGAAACGCTGTCCGATCAAACAGGTTTCGGATGGCCACATCCAAATCTAATTGTACTTTATGGCTGGTGTATATCTAGCAATGAAAAAATATTGGTATATGAATATATGGAAGGTGGCAGTTTAGAGGATGTGATCACCGACTGGAATCGGTTCGGATGGGATAAGCGATTAACAGCAGCGGTGGAAATAGCGAATGCATTAGTCTTTTTGCACCATGAATGTGAGCCTGTAATTGTGCACAGAGACGTGAAGGCAAGCAACGCGTTGTTGGATGGAGTGGGGAGGGCAAAGATGACAGATTTTGGGTTGGCGAGGATGGTGGGGATGGGTGAGAGTCATGTGAGTACGATGGTTGCAGGGACAGTGGGGTATGTAGCTCCGGAGTATGGAGTTACGGGGAGGGTTACGACGAAGGGGGATGTGTATAGTTTTGGGGTGCTGCTGATGGAGTTGACGATTGGAAGAAGGGCAATTGATGAGGATGAGTGTTTGGTAGAGTGGGTAAGGCGAGTCGGGGTGAGGGAGGTGGTTGAGAGCGTTGTGAGGGGTAAACAAGGGAAGAAAGTGATTGAAATGTGGGGGGTGATGAAGGTTGCAATTTGGTGCACGGTCGATGATCCTTGTATGAGGCCAGATATGAGGGAAGTTTTGGCTATATTGAGGAGTTTCTGGGTGAAGTATGATTCTAGTAGTAGCGGTAGCAGTGTTAGTAGTAAATTGAGTGCATTATCTCCCGACTAGATTTGTAAAAAGATGTTTAGAAATTTATACACACATTAAAAAATTCCTTGTTTGTTAAATCAAAGATTTTACCGACATGTTTCAGTTTTGAGTTCTAGTTTTCATATATTATGGGTATATTTTTGATGTAACTAATTCAAATAGAAATTAAGATTAGTTTCATGTCGAAATCAGATTATGATACGGTATCAGTTTTGTATGTTTG

Functional annotation

Database	accession number	e-value	annotation
nr	POO01935.1	1.3e-169	Serine/threonine protein kinase
Swissprot	C0LGJ1.1	5.5e-162	Probable LRR receptor-like serine/threonine-protein kinase At1g74360
trEMBL	A0A2P5FVY8	9.1e-170	Serine/threonine protein kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G74360.1	53.38	0.0	1125		Leucine-rich repeat protein kinase family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC2G01502	AT1G74360.1	1049	452	10	24	1038	40	1085	53.38	0.0	1125
AfisC2G01502	AT2G01950.1	1054	555	32	67	1052	160	1140	33.97	3e-129	460
AfisC2G01502	AT2G01950.1	476	260	10	62	486	273	743	33.61	9e-50	196

Ortholog group

Species	Genes
Allium cepa	g172513.t1
Allium fistulosum	AfisC2G01502
Allium sativum	Asa5G01300.1
Arabidopsis thaliana	AT1G74360.1
Oryza sativa	LOC_Os07g40630.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF08263.9	LRRNT_2	Family	23	66	28.7	1.1e-06
PF12799.4	LRR_4	Repeat	94	129	29.1	8.3e-07
PF13516.3	LRR_6	Repeat	187	200	9.7	0.87
PF13855.3	LRR_8	Repeat	331	390	29.6	3.8e-07
PF13855.3	LRR_8	Repeat	404	463	33.4	2.5e-08
PF00069.22	Pkinase	Domain	774	979	132.3	1.8e-38

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0000166	F	nucleotide binding
GO:0001578	P	microtubule bundle formation
GO:0005739	C	mitochondrion
GO:0004675	F	transmembrane receptor protein serine/threonine kinase activity
GO:0004713	F	protein tyrosine kinase activity
GO:0005496	F	steroid binding
GO:0005768	C	endosome
GO:0007166	P	cell surface receptor signaling pathway
GO:0009536	C	plastid
GO:0009554	P	megasporogenesis
GO:0009556	P	microsporogenesis
GO:0009647	P	skotomorphogenesis
GO:0009729	P	detection of brassinosteroid stimulus
GO:0009826	P	unidimensional cell growth
GO:0009911	P	positive regulation of flower development
GO:0010224	P	response to UV-B
GO:0010234	P	anther wall tapetum cell fate specification
GO:0010268	P	brassinosteroid homeostasis
GO:0010584	P	pollen exine formation
GO:0042803	F	protein homodimerization activity
GO:0043234	C	protein complex
GO:0046777	P	protein autophosphorylation
GO:0046982	F	protein heterodimerization activity
GO:0048366	P	leaf development
GO:0051607	P	defense response to virus
GO:0060548	P	negative regulation of cell death
GO:1900140	P	regulation of seedling development
GO:1900459	P	positive regulation of brassinosteroid mediated signaling pathway

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network