Detail information of AfisC2G01550


Location
GeneChrStartEndStrand
AfisC2G01550chr2218235017218244504-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020246466.12.1e-169DDT domain-containing protein DDB_G0282237
SwissprotQ54ST3.16.3e-17DDT domain-containing protein DDB_G0282237
trEMBLA0A5P1E8771.5e-169DDT domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G08630.140.758e-136 481DDT domain-containing protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag514044.t1
Allium fistulosumAfisC2G01550
Allium sativumAsa5G01072.1
Arabidopsis thalianaAT5G08630.1
Oryza sativaLOC_Os02g35100.1; LOC_Os02g35100.2

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF10537.6WAC_Acf1_DNA_bdDomain24118113.45.5e-33
PF02791.14DDTFamily27733456.81.8e-15
PF15612.3WHIM1Family37341118.70.00089
PF15613.3WSDFamily49856264.11.2e-17

Gene Ontology
AccessionOntologyName
GO:0006325Pchromatin organization
GO:0006355Pregulation of transcription, DNA-templated
GO:0043229Cintracellular organelle

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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