result

Gene information

Detail information of AfisC2G01993

Location

Gene	Chr	Start	End	Strand
AfisC2G01993	chr2	286781308	286787550	+

Sequences

CDS

>AfisC2G01993
ATGGGTGATTTCTTCGGTTCAGTACGTAAATCACTGGTCTTTCGACCTTACTCAAATCCTGAAGAAAACTCTCTGGTTTCTTCTTCGATTGGAAATCTGACGGAAAAAATCGGATCTTCGTTGCGAAAATCGAAAGCCAGTCTTGGAATAGGGTTTTCTAGTTTTAAGATTCAGTCGCCTCCTACAATTACTGAAGAAGAAAAAGAAGAGGAAACGCATCCGATTAGATGGCGAAAAGGAGAATTGATTGGATGTGGCGCTTTTGGACATGTTTATATGGGGATGAATCTCGATTCTGGAGAGCTTCTTGCTGTTAAACAGGTTATGATTGGAGTGAGCAGTGCATCAAAGGAGAAAGCCCAAGCGCATATAAGGGAGTTGGAGGAGGAAGTGAAGCTTCTGAAGAATCTTTCTCATGCTAATATCGTTAGATATTTAGGGACAGCAAGGGAAGATGATACATTGAATATATTGCTAGAATTTGTGCCTGGAGGATCCATCTCATCATTACTTGGCAAATTTGGCTCATTTCCGGAAGCTGTGATAAGGATGTATACAAAACAGCTTTTACAAGGACTTGAGTATCTTCATCATAATAACATTATACACAGAGATATAAAGGGAGCGAATATACTTGTTGATAACAAAGGTTGCATTAAACTCGCCGATTTTGGAGCATCCAAGCAAGTAGCCAAACTGGCAACTACGAATCAAGCCAAGTCAATGAAAGGAACTCCATATTGGATGGCACCAGAAGTGATAGTTCAGAGTGGATATAGCTTCTCCGCTGACATATGGAGTGTTGGTTGTACTGTTATCGAGATGGCAACTGGGAAACCTCCTTGGAGCCAGCAATATCAAGAGGTTGCAGCTTTGTTCCATGTCGGGACAACAAAATCTCATCCCCCTATCCCTGAGCATCTCTCCTCTGATGCAAAAGACTTCCTATTAAAATGCTTGCAACAGGAACCAAATTTGAGGCCTACTGCATCCAAATTGCTGCAGCATCCTTTTGTGGCAAGGGAGTATCAGGATTCACGCATACTACGCAATTCTTCCAGCGTGGTACCTAGTAGAAGTATACTTCCAATCTCAAAAACTCTCAAAACAAGCAACCTAAGTCCAGTGCATGGGGTCCCAAGGTATGAGGAATATGGAAATGAGACTTTTTCTATTTTATCCCTGGAGAAGGATTTACCACTCCGTCCTTTGTGGGAGACTGGCAATAGTAGTGATAGCATGTGTCAATTTGATAATGTTAAGAGCTTTAATCCAATGTCAGAGCCCTTTGATGACTGGTCATCCAAATTCGATTTAAATCCAGAACGCAAAATGGCCTTTGATGGTTGTGTGAGTGAATCAATCTGCAATGTGACAGTTAACACTTCAATCTCCGATGCAGTTTGCGAACAGGATGATGAAGTTATCGAGTCAAAAATTAGAGCATTTTTGGATGAGAAGGCCTTTGAGTTAAAGAAGCTACAGACACCATTGTTTGAAGAGTTTGAATTAAAGAACAACGGCAAGGAAACAGCAGCAAATACTCCAAAATTGCCTCCAAAATCTCCCTCAAAAGCTGCTTCACATATGGATTTTGTAAAAAAGAGTATAAGCCCCTTGCTTTCAAGCAGGCGATATTCTTGTGTTGATGCAAACAATAATAGAATTCTGAAGGAAATACAGTCACCCAGGCACAACGAACTTGGTGAACCAAGTGAGACTTTTTCCAAAAAGGAGGACGAATGGAGAAAAGAGCTGGCTGATGAACTTGAAAGCTTGCGGCAGCAAGGAACTGGAGCAGTAAGAGCTTCTCCTAATTTAGGTAGAAGTACAAGTAGGAAAAGAGATCGCTTTAGATTTACATCACCAGAAAAATGA

Protein

Gene

>AfisC2G01993
CCAAACTGAACTGAACGGAAAAGGAAGAAGAAGGAAAAAAACAAAGAAAAGAAAAGAGAATTGACTAAACTATAGGATCCAATTGAGGAAGAAGGAGAGGAATGGGTGATTTCTTCGGTTCAGTACGTAAATCACTGGTCTTTCGACCTTACTCAAATCCTGAAGAAAACTCTCTGGTTTCTTCTTCGATTGGAAATCTGACGGAAAAAATCGGATCTTCGTTGCGAAAATCGAAAGCCAGTCTTGGAATAGGGTTTTCTAGTTTTAAGATTCAGTCGCCTCCTACAATTACTGAAGAAGAAAAAGAAGAGGAAACGCATCCGATTAGATGGCGAAAAGGAGAATTGATTGGATGTGGCGCTTTTGGACATGTTTATATGGGGATGAATCTCGATTCTGGAGAGCTTCTTGCTGTTAAACAGGTTTAAAGATAATTATTTTTTGTGATTTGCTGTCCAGAATTTAGGGGTTAGGTTTTGATTCACGGAGTTAATATTTGCAGGTTATGATTGGAGTGAGCAGTGCATCAAAGGAGAAAGCCCAAGTGAGTTCATTATATTATTTTGTATCCTAGTTTAGAACATATTTAAAAATTGTTTATGTGTAATGTCTAATGTGTAATAGGCGCATATAAGGGAGTTGGAGGAGGAAGTGAAGCTTCTGAAGAATCTTTCTCATGCTAATATCGTTGTGAGTATCTTTTGTTGTTGGCATTGCTGTTTTATTATTATATTCGGGGTTAATGGTTTATTCTGTCTAAATGTGTTTAAATAGAGATATTTAGGGACAGCAAGGGAAGATGATACATTGAATATATTGCTAGAATTTGTGCCTGGAGGATCCATCTCATCATTACTTGGCAAATTTGGCTCATTTCCGGAAGCTGTGAGTTACTAACTATTAGTATTTCACCAAAAATTTGTAAAGTTAATTGAAATATTAAATAATCAATCTGTTTTGTAATTATTTTTTCATAGGTGATAAGGATGTATACAAAACAGCTTTTACAAGGACTTGAGTATCTTCATCATAATAACATTATACACAGAGATATAAAGGTGCGTGCCTTGTTGCACTACATCAAATATTACTGAAATGAATTTTTGTTCTTTAAACTGTATATTTCAGGGAGCGAATATACTTGTTGATAACAAAGGTTGCATTAAACTCGCCGATTTTGGAGCATCCAAGCAAGTAGCCAAACTGGTACTCATGCAACTTTTCTTGTGACTGCCAATTATGTAACAGTTAAATAGACTGTGGATCATCAGCCTCATAGATTTGAATTTAGTTTTAAGTAAGCTGCATTTAATAGTATATTCACATTTGAGTCAATTTATTTGACTATGCATAGGCAACTACGAATCAAGCCAAGTCAATGAAAGGAACTCCATATTGGATGGCACCAGAAGTGATAGTTCAGAGTGGATATAGCTTGTAAGAGTCAGATAATTTTCTCTTCTTATTCTTTAATTTCACTTACATTACTCCAAAGCATGGTGTCCTCCATAATTAATTGTTGCTAGGTAATAGTCTTGAAACGTTAGAAGAAAAAACATCATTATAAATCCTGTTTTTCTTCTTTACAGGAACTAGGGAAATAAATGCATATTTTGGTTCTAATATTGGGTTTAAAGCAATTTTTTAGAAAATAATAATTGATAAACATTCAAACAAATATCGTAGAAACAAAGAAAAAAATACGATAAAAGTAAGAAGATGCTAAAATTTATGATGGTTTGATGTAATTTTGACCTACGTTCACTATCATTTTTATTGATTTATTGTATTATGACCTTGGTAATGAAAGATTTCGAAAGTACAAGGGTTTTTGACTAAAAAGTTTGGTAGATTATGAGTTTATGAGCATTTGAATGAGGATCCCTTTTCTCTTTAGCTCTTCTACTATTTATAGAGCTCTGTAGCCAAAAATATCCTTTGGAAAGCAGATCTAAGAGTTTGAGTAAGCTTCCCCTGAAAAATCTCCTTGTTTGAACAAATTTTGACCAATCTAAAATTTGTCCAAAGGTCAATTTTGATCGCTTTTGGGTCATTTCAACCCTCTACATTTGATCATCTTTTGGGATCACTTTGACCTTTTTCTGGGTCATTTCGACCGATCCCCTTTACTAATTAAATTAAGCCTCTTTGGGTTATTTTTGATAGCCTTTTTTATTAGATCATTTTGACTGCTCAAATTGGTCCCTCCTTATACACGCTTCAACCGACACATTTTGGTTCATTTCGATCGACCCCCCTTTTTTCCAATAGCACTCTGGGTCATTTCGACAGTATTTTGGATCATTTCAACCCCTTCTGGGATCATTCTGACTGCTCAAAATTATCGCTTTCTGTACACAATTAAACGATCATTTTGGCTAGGTTTTTAGATTCTTGTACTTCGTATATTGCCAAACTCCTGATAGTCTTCTTGTAAAATTCAAAAGTATTGTATGTGCAAATCATATAATCAATAAATATTGGACAGTTGTTTTCTAATAAATATAGGTAGTTGTTTTTTGAATGTAGTGAAATACAAAGTAGTTGTCTTCTGGTAAATATAAATCTTATGTATGGGTTTATCACGTTTTAGTTGAAATTTAAAAAAAAATGGCATGCTAAACCAACAAAGTAGTTGACTCTTAAGTACTTCTTCAGGCTTGTTTCCAATAGTATCTCTGGAGTACATTCTAAGATATAATGTCGAATATTTTAATTTGATCTCCAATCAGTATATTGCATAACTCCTGATAGTCTTCTTGTAAAACTCAAAAGTAATTGTATGTGCAAATCATACAATCAATAAATATCGGACAGTTGTCTTCTGATAAATACAAGTAGTTGTCTTTTGAATGTACGGGTTTAACACATTTTAATTGAATTTCAAAAAATAGTACCAGTAGTAATTCATGTGCAAGTTTTATGTTTTACATGATGCTTTGCTAATTAGATGTTGAATGCCACGCGATCATTTGTTCATTGTATATAACTTTGGAATATTGGTTACCTTTTGTTCAAGTGGGTAAGATTTAATTTTGTAGGTACTAGGTCCTCTTTGAATTAAGTTATAATCCCTTATCATGAGGGGTTATGTTCATCTCTCGAAAAGATTTGCATTATTTGACTTTGAGAATTTGCTAACATATGTGTACATAAATATAAAATAAAGTGAAAGCTTTCCTATATTAGCAAGCTATCTCATACAAAATGCACTCTGCTATTTAGGGCGATATCTAAGATGCCTAAAACTCTGTAGATGTATATATAAATTTGATGTTGCGATAGGAAGAGGGTTGCTTGAAAGAGGTTTTCTATTAGTTGAGGTGCCCCTCCGATATTCTAACTTATAAACTCTACCCCTGACAGAACTACTGGACTAATAGAAAAGACTTGCATTATTTGACTTTGAGAATTTGCTAACATATGTGTACATAAATATAAAATAAAGTGAAAGCTTTCCTATATTAGCAAGCTATCTCATACAAAATGCACTCTGCTATTTAGGGCGATATCTAAGATGCCTAAAACTCTGTAGATGTATATATAAATTTGATGTTGCGATAGGAAGAGGGTTGCTTGAAAGAGGTTTTCTATTAGTTGAGGTGCCCCTCCGATATTCTAACTTATAAACTCTACCCCTGACAGAACTACTGGACTCGACTCTTTCCTTGCTGCCACTCCCTAGCATGCTGATTCAAACACTTCTAATCATTTTTCCATACTTTTGAAAACTGAGTTTTTTTTACAGCAGTTTAGCCTAAAATATTTACTTGAGAGTTATCATTATAACTCAATATTTTAACCTGTTTGTCCCCTTATGATACTAAATCCCTCACATGCTATTTAGTGATGATATTTCCCTATCATTTGATTATTATGTTTGCTTTATTTTCTTAAAATCTATAGCTCCGCTGACATATGGAGTGTTGGTTGTACTGTTATCGAGATGGCAACTGGGAAACCTCCTTGGAGCCAGCAATATCAAGAGGTTAATTTTCTTCATTTCATCCTTATATAGGAAAGTTTTCTATTATTTATTGACATATGGAGTGTTGGTTGATTTCTCAGGTTGCAGCTTTGTTCCATGTCGGGACAACAAAATCTCATCCCCCTATCCCTGAGCATCTCTCCTCTGATGCAAAAGACTTCCTATTAAAATGCTTGCAACAGTATATCCTATTCTAGTTCTCCTACATTCATGAAATTATAATTTCAACAAGTCAAAATTATGAATTATCAAATTTTGAGAGCGTTGGTGTAACATAGCTCGCTTATATTTGGTTACAATGAAATAGTGTATCCTGACTGATTTTTTTTAATATAGGGAACCAAATTTGAGGCCTACTGCATCCAAATTGCTGCAGGTTTTTTGCAGATTGTTTTGTTGCATCATATCTCATATGAGACAGATTTTTTTTCTTCTTTCTTTCTTTCTGGTTTTTTTAAACAAGTAAATGATATTTGAAAATTTATCTTTTATGCAGCATCCTTTTGTGGCAAGGGAGTATCAGGATTCACGCATACTACGCAATTCTTCCAGCGTGGTTAGTTTACCCAAATGCCTTTCCTTTCTTCACTTTTTCAATTTTTTTGAGTTCCTGTAAAATTGAAGTAATATTTTTATTTCTCCGATACATTTTGTGAATCAGGTACCTAGTAGAAGTATACTTCCAATCTCAAAAACTCTCAAAACAAGCAAGTAAGACGTAATTTTTCACATGTAGTATATTCTGTAACGTTACTCAAAATATGACTTCTAATGAATATGGCCAGCCTAAGTCCAGTGCATGGGGTCCCAAGGTATGAGGAATATGGAAATGAGACTTTTTCTATTTTATCCCTGGAGAAGGATTTACCACTCCGTCCTTTGTGGGAGACTGGCAATAGTAGTGATAGCATGTGTCAATTTGATAATGTTAAGGTATGAATGAACATTATTCTTAGTACGATGAATATATTATTTGTGTTTATGGTTACTTTATGTGCTAATATTCTGTATAAAAATCCCTGTATTAGAGCTTTAATCCAATGTCAGAGCCCTTTGATGACTGGTCATCCAAATTCGATTTAAATCCAGAACGCAAAATGGCCTTTGATGGTTGTGTGAGTGAATCAATCTGCAATGTGACAGTTAACACTTCAATCTCCGATGCAGTTTGCGAACAGGATGATGAAGTTATCGAGTCAAAAATTAGAGCATTTTTGGATGAGAAGGTTTTTGTTGATGATATTTTCGGTCTGTCTACATTTCTATTTGCATCAGTATTAATTCATTGAGCTTTTATCACATATCAGGCCTTTGAGTTAAAGAAGCTACAGACACCATTGTTTGAAGAGTTTGAATTAAAGAACAACGGCAAGGAAACAGCAGCAAATACTCCAAAATTGCCTCCAAAATCTCCCTCAAAAGCTGCTTCACATATGGATTTTGTAAAAAAGAGTATAAGCCCCTTGCTTTCAAGCAGGCGATATTCTTGTGTTGATGCAAACAATAATAGAATTCTGAAGGAAATACAGTCACCCAGGCACAACGAACTTGGTGAACCAAGGTTTGTTTAGAAATACTTGTTATCAATTTTTTTTTGGTATAAAACTGCTTTTCCATGACTGATGTTGTTTGTAAATCAATAGTGAGACTTTTTCCAAAAAGGAGGACGAATGGAGAAAAGAGCTGGCTGATGAACTTGGTATTGTTTATAGATTGTACTTTGCATAATGTACACCTTGACTTTGTGCTCATGTATGGTTCCAATTTTTGTTCAACGCTTGTTTAATTGCAATTGCAGAAAGCTTGCGGCAGCAAGGAACTGGAGCAGTAAGAGCTTCTCCTAATTTAGGTAGAAGTACAAGTAGGAAAAGAGATCGCTTTAGATTTACATCACCAGAAAAATGACTTCGATCAATTTTTATATGAATTCATCTACAGCAAAATCTTGGTGTGCTTGAGACACAGTGATGATGCTTTTCAACCGAATACGATAAACTGGGAGAAAAATTGTCAATGTTTTTTTGTAATGGTTACAAATTTGAGTGTAATACAGTAGTGATCTGTGGAAGCAAATCGAAGTTGTAATCGTTATCAGCATTAAAGTACTTATTTTAGATACTTGTGATAATTTTCTGTAGCTTTTTATGCATAATTTTGGTACAAAAAGTGGTTTAAAATGTATTTATATTGGGGTAAACTGATTGTAGAAAGTATTCAATGATATTTTGCAAGATTGGTGATTTATTCCAGAAATT

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020259394.1	1.4e-216	mitogen-activated protein kinase kinase kinase NPK1-like isoform X1
Swissprot	Q40541.1	3.6e-177	Nicotiana protein kinase 1
trEMBL	A0A5P1FEI9	9.9e-217	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G09000.1	51.66	5e-165	578	ANP1;MAPKKK1;NP1	NPK1-related protein kinase 1

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC2G01993	AT1G09000.1	691	243	20	1	625	1	666	51.66	5e-165	578
AfisC2G01993	AT3G06030.1	656	254	16	1	600	1	642	50.61	2e-156	549
AfisC2G01993	AT1G54960.1	632	212	14	56	625	5	606	51.90	1e-153	540

Ortholog group

Species	Genes
Allium cepa	g193317.t1
Allium fistulosum	AfisC2G01993
Allium sativum	Asa3G03182.1; Asa3G03184.1; Asa3G03597.1
Arabidopsis thaliana	AT1G09000.1; AT1G54960.1; AT3G06030.1
Oryza sativa	LOC_Os08g32600.1; LOC_Os09g21510.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	78	339	246.5	2.6e-73

Gene Ontology

Accession	Ontology	Name
GO:0000749	P	response to pheromone involved in conjugation with cellular fusion
GO:0000915	P	actomyosin contractile ring assembly
GO:0000919	P	cell plate assembly
GO:0001568	P	blood vessel development
GO:0005829	C	cytosol
GO:0004709	F	MAP kinase kinase kinase activity
GO:0005654	C	nucleoplasm
GO:0007257	P	activation of JUN kinase activity
GO:0009524	C	phragmoplast
GO:0009793	P	embryo development ending in seed dormancy
GO:0010098	P	suspensor development
GO:0010103	P	stomatal complex morphogenesis
GO:0010229	P	inflorescence development
GO:0045893	P	positive regulation of transcription, DNA-templated
GO:0019901	F	protein kinase binding
GO:0071260	P	cellular response to mechanical stimulus
GO:0032005	P	signal transduction involved in conjugation with cellular fusion
GO:0043123	P	positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043622	P	cortical microtubule organization
GO:0046777	P	protein autophosphorylation
GO:0048046	C	apoplast
GO:1900745	P	positive regulation of p38MAPK cascade

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K20606	ANP1; mitogen-activated protein kinase kinase kinase ANP1	EC:2.7.11.25	MAPK signaling pathway - plant	ko04016

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network