result

Gene information

Detail information of AfisC2G02108

Location

Gene	Chr	Start	End	Strand
AfisC2G02108	chr2	308669705	308671476	-

Sequences

CDS

Protein

Gene

>AfisC2G02108
TTTAAAGTTGGGCTATCTAGCCTATTTAGTTCCTGTTTTATCTTCTTCCTAAGTTTTCAGTTAGACTTTTTGTTTATCTCAGTCTTAGATATGGTAACCAATATCTATTCTCTCTCAGAATATATCAAAAATGATAATATGCTGAGAATTAAATTTTACTTGTAACTGTTCCTTTTCCCTTGCAGACATGACCCAGTTCTTCCTATTTTAATCCTTAGACAACATAAGTCTTTAATACCCCACACACACCGCACACCCAGTGGCGGAGCTAGCTTTCAACTTGAGATAGGGCATAGATCAATTAATTAGAAAAAGATAGCTGCTACATCTTCGATATATCAACTTCACTAAGTATAAAAGTTGAAAAGGTTCACTTTTTGAATATATAATGTAATGCGAAGGAGATATGGGTTGCAGGCATAGATCAATTTGAGGTAGGGCATGTTTGATGATTCTGGGTAGGGCCAAATTTGACAAAAGCGCTTTTTACAAAAGAACAACATAAATTTAGGTAGGGCATTGGCCCCAGCTGAGAGAGCACTTTGGCTCCGCCCCTGCACACAAAGGTTCTTAGTTGATCATGATTCATGATATATCAAAAGTTTCAATGATTTTCTCATGTGCTGTTGTAGAAACAGTTCTTTATTTCATGATAATTCAGTGATGTAAAACCAAAAGTTTGCAATTCTGAACTGAATGGCAGGGGAATGTGGTGTGATTGTGTGAGTGGCAACAAAATATGTGCTCTATTTGTACTATGTATACTTCAGGCAGCTTAAATGATTATTATATTCTAACCAGAAAACACATATTGCATTATGTACCAGACTTCTGCTCGTAACTTTTTAATTACAAACGAGCATCTGTCTTCGTCTCATGCACATTGCCATGTAACATGTGATTTGAACTTTACTACTGCATGCTCTATATGAATACACATTCTCCTCAGTTTTCCTGTCCATATATTAATCAATACAAACTGCCAAGTGTTAACATAGGAGATGGTAATTCAACAAGGATGCATAAACACAAGCAGGGGCCCATGGAAAGTGAAGCAAAAAGGTAAAGATGGGAAACAAAAGGAGTCACTTCGATATCCATCTGAACGTGAAAGGCAAAACATCCAGAGCCGAGAGAGCCGTAGAAGGAGAATTGCGACTAAAATATTTGAAGGGTTGCTTAAATATGGTAATTTTGATCTTCCAAAGCATCCAGGAAGAAATGAATTGCTTAAGGCACTGTGCAAAGAGGCTGGATGGATTGTTGATGACAATGGCAACATAACCAGAAAGGTACTTATTAGCCAGTGCAAATAGTATGTTCAAGCTTAACTGATATGCATTATTCACCTTTAATGACATACTCTAGTTAATCACTTCAATTATACATACAATTTTTGATGTTGCTGGAGAATATATAATTTGTAGCAGTTTCTAATGTATTAGCATATATCCTAGCATGTATGAATTTGGAAATAAATGGTCATGTGCTATTTCTCTTGCCCAAAATGATAAACATATGAGTTTGACTAAGGTGCTAACTGTAAGTTAGAAAGCATGAATTGCATTTTGTATGCAATGGAACCTTATCTTCGTGTTTATTATTGCATCTGCATGTAGAATTCAGGTGTTGAATATAGAGTAAAACTGAATTTATGTTATAAGCAGGAGGTTGAGAGCAAGAAAATATTGCAGCCATTTGGATCACCAGTCAGTTTAAAAGCAGAAGAAGTTAACTTAGAGCTCACTTTGGCACTTCCTTCAAACTGTTGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020244516.1	4.0e-25	BES1/BZR1 homolog protein 4-like
Swissprot	Q9ZV88.1	1.3e-12	BES1/BZR1 homolog protein 4
trEMBL	A0A8X8C0K3	6.4e-25	Uncharacterized protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G19350.1	55.32	3e-11	63.9	BES1;BZR2	Brassinosteroid signalling positive regulator (BZR1) family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC2G02108	AT1G19350.3	47	21	51	97	64	110	55.32	2e-11	63.9
AfisC2G02108	AT1G19350.6	47	21	51	97	42	88	55.32	3e-11	63.9
AfisC2G02108	AT1G19350.1	47	21	51	97	42	88	55.32	3e-11	63.9

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF05687.10	BES1_N	Family	31	101	89.6	2.4e-25

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0001046	F	core promoter sequence-specific DNA binding
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0042742	P	defense response to bacterium
GO:0005773	C	vacuole
GO:0005829	C	cytosol
GO:0005634	C	nucleus
GO:0009742	P	brassinosteroid mediated signaling pathway
GO:0045892	P	negative regulation of transcription, DNA-templated
GO:0048316	P	seed development
GO:0048481	P	plant ovule development
GO:1904961	P	quiescent center organization

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network