result

Gene information

Detail information of AfisC2G02149

Location

Gene	Chr	Start	End	Strand
AfisC2G02149	chr2	316388318	316390121	-

Sequences

CDS

>AfisC2G02149
ATGTACTTGTTTCTTTTGGCGAAGACACCTAGCAAAATCGCACCTTACAAATGTTCAAATTTCAGAACAAAACCAAGTCCTGTGTTGAACCGATTTAATCCACTAAGCATTAGAGGATCGATTCCTGAAATAGAATACAGACATATAGAAGCTGCAACCGATAACTTTAGCGAGACCAACTCTCTTTCAAACGGAGTCCATGGTGCTGTTTTGTACAAAGGTCAGTTTGGGTTTAGTAGTTATGCTACTGTGAAGAAACTGGAAGTTAAGAATCTGATATGTGAGAGAGAATTTGAGAATGAGATTATGTTGCTTAGCAATATCAAACATCCAAACATAATCTCTCTAATTGGTTATTGCGTTCATGCAAACGCTCGACTTCTTGTTTATGAGTTCATGCATAATGGATCGCTGGAGATGCAACTTCATGGGTCATCTCGTGGTGCAAACTTACAGTGGCACATTCGAATGAAGATTGCATTAGAGATAGCAAAAGGATTAGAGTATCTACATGAACATTGCAGTCCTCCTATGATGTGTAGAGCTTTAAATTCCTGTAAAATTCTTCTCGATTCAAATTTTAACGCAAAGATTTCTGATTTTGGCCAAGCTTTGACTAGTGGAGGCTCAAATGAACATATAACAAATCTTTCTGAATTTGAAGGCTATCTGGCCCCTGAATGTTTCTTAAATGCAGAAGTAACAGGGAAAAGTGATGTATATGCATTTGGGATTATCCTTTTTGAACTTCTATTGGGGAAGAAACCATTCACAGGGACTCAAAGCCAATATAATATAACTTGGCTAACCGATAGGCAGAAACTTCCAGATTTGGTTGATCCTGTAATCAGACATACAATGGATGTAAAACACTTATGTCAGGCAGCTGCAGTTGCAGTTTTATGTGTACAGAAGGAGCCAATTTACAGACCATTAATAACTGATGTTGTTTATTCTCTCATCCCACTTGTGCCTAAAGTGTTCGGCGGAACTCTTGATGCTTCATCCGGTTTATGA

Protein

Gene

>AfisC2G02149
ATGTACTTGTTTCTTTTGGCGAAGACACCTAGCAAAATCGCACCTTACAAATGTTCAAATTTCAGGTACATTGCTTATGTTCATTTGACCTTATCATCTTTCTATGGCATAAGTAGAGATAGAATGAATCAATTATGAAGTCTGTAACAGTTTAAAGCAAGTGTACGCTAGACTGTATTTTGTTTCATGTACACTGAATTCATGTCAAAACTTGAGAATTTATATCTCATTTTTCTTAGATACGTCTGATAGAACAAAACCAAGTCCTGTGTTGAACCGATTTAATCCACTAAGCATTAGAGGATCGATTCCTGAAATAGAATACAGACATATAGAAGCTGCAACCGATAACTTTAGCGAGACCAACTCTCTTTCAAACGGAGTCCATGGTGCTGTTTTGTACAAAGGTCAGTTTGGGTTTAGTAGTTATGCTACTGTGAAGAAACTGGAAGTTAAGAATCTGATATGTGAGAGAGAATTTGAGGTGCATATGCTTCTCTTTTCATATGTAGTGTTCATTTAACTTCTTTATGTATATATGATATATTTGTATCTTTGAGTATTTTGCAGAATGAGATTATGTTGCTTAGCAATATCAAACATCCAAACATAATCTCTCTAATTGGTTATTGCGTTCATGCAAACGCTCGACTTCTTGTTTATGAGTTCATGCATAATGGATCGCTGGAGATGCAACTTCATGGTACATTTTAAAGTACTCAATTCTTTTTCTATCTAATATGTGTTTCATTTAATGTGAAATTGTATGCATTTTTTTGGCATTTTCAGGGTCATCTCGTGGTGCAAACTTACAGTGGCACATTCGAATGAAGATTGCATTAGAGATAGCAAAGTCCTTAATCAATACTAAGCTATCTTCGTATTTTGTATTAAAGTTAAAAAAAAAATTATGTATATATTGTTCTTTTTTCTTGTTACAGAGGATTAGAGTATCTACATGAACATTGCAGTCCTCCTATGATGTGTAGAGCTTTAAATTCCTGTAAAATTCTTCTCGATTCAAATTTTAACGCAAAGGTGCTTTCACAGTATTTTTGAGAAATTCTACATTGCTGTTCTCAACTCATGTAGCATTTATGAGCACCTTTTTCTGTTCACATAGATTTCTGATTTTGGCCAAGCTTTGACTAGTGGAGGCTCAAATGAACATATAACAAATCTTTCTGAATTTGAAGGCTATCTGGCCCCTGAATGTTTCTTAAATGGTATGTAAATATTGGATTGAGCTTCAATGTGTACGTTTACTGCATTAGACACTTGTTTCTATCATCTATTTTTCTTGAGCAGAAGTAACAGGGAAAAGTGATGTATATGCATTTGGGATTATCCTTTTTGAACTTCTATTGGGGAAGAAACCATTCACAGGGACTCAAAGCCAATATAATATAACTTGGGTACGCATTACTAATAGTTTAATTTCACCATTCAATAGAAAATGAAACATTTGATCATGTATAGTTTTGATTCTCAATTTTATTTAAAAATGTTATGCAGCTAACCGATAGGCAGAAACTTCCAGATTTGGTTGATCCTGTAATCAGACATACAATGGATGTAAAACACTTATGTCAGGTATTTTAATTTAGTTTTGAATATATCATGATATGCAGACTTTAACAAACAAAAATAATAACATGTATGCTTGTAGGCAGCTGCAGTTGCAGTTTTATGTGTACAGAAGGAGCCAATTTACAGACCATTAATAACTGATGTTGTTTATTCTCTCATCCCACTTGTGCCTAAAGTGTTCGGCGGAACTCTTGATGCTTCATCCGGTTTATGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020244946.1	1.8e-106	probable receptor-like protein kinase At1g80640
Swissprot	Q0V7T5.1	1.3e-77	Probable receptor-like protein kinase At1g80640
trEMBL	A0A835DKS1	9.5e-97	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G32000.1	54.10	7e-85	310		Protein kinase superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC2G02149	AT4G32000.1	305	132	3	35	332	108	411	54.10	7e-85	310
AfisC2G02149	AT4G32000.2	305	132	3	35	332	109	412	54.10	8e-85	310
AfisC2G02149	AT5G11020.1	318	134	5	29	332	107	422	52.83	8e-83	303

Ortholog group

Species	Genes
Allium cepa	g114290.t1
Allium fistulosum	AfisC2G02149
Allium sativum	Asa2G04282.1; Asa2G04291.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF07714.14	Pkinase_Tyr	Domain	62	277	125.0	2.8e-36

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0004674	F	protein serine/threonine kinase activity
GO:0005488	F	binding
GO:0009507	C	chloroplast
GO:0009860	P	pollen tube growth
GO:0010068	P	protoderm histogenesis
GO:0010183	P	pollen tube guidance
GO:0042335	P	cuticle development
GO:0046777	P	protein autophosphorylation
GO:0048367	P	shoot system development
GO:0048768	P	root hair cell tip growth
GO:0090404	C	pollen tube tip
GO:1900459	P	positive regulation of brassinosteroid mediated signaling pathway
GO:1905393

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network