Detail information of AfisC2G02304


Location
GeneChrStartEndStrand
AfisC2G02304chr2343558024343585166-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020242731.11.9e-113LOW QUALITY PROTEIN: histone-lysine N-methyltransferase ATXR4
SwissprotQ9FG08.23.2e-97Trithorax-related protein 4
trEMBLA0A8B8ZD267.0e-113histone-lysine N-methyltransferase ATXR4

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G06620.158.424e-100 361ATXR4;SDG38SET domain protein 38

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Ortholog group
SpeciesGenes
Allium cepag75.t1
Allium fistulosumAfisC2G02304
Allium sativumAsa5G02103.1
Arabidopsis thalianaAT5G06620.1
Oryza sativaLOC_Os10g27060.1; LOC_Os10g27060.2

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00856.25SETFamily5329455.58e-15

Gene Ontology
AccessionOntologyName
GO:0000979FRNA polymerase II core promoter sequence-specific DNA binding
GO:0000993FRNA polymerase II core binding
GO:0001162FRNA polymerase II intronic transcription regulatory region sequence-specific DNA binding
GO:0006334Pnucleosome assembly
GO:0005634Cnucleus
GO:0006469Pnegative regulation of protein kinase activity
GO:0014904Pmyotube cell development
GO:0018024Fhistone-lysine N-methyltransferase activity
GO:0032259Pmethylation
GO:0033138Ppositive regulation of peptidyl-serine phosphorylation
GO:0045184Pestablishment of protein localization
GO:0045944Ppositive regulation of transcription from RNA polymerase II promoter
GO:0071549Pcellular response to dexamethasone stimulus

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K11426SMYD; [histone H3]-lysine4/36 N-trimethyltransferase SMYDEC:2.1.1.354 2.1.1.357 Lysine degradationko00310

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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