Gene information

Detail information of AfisC2G02425

Location

Gene	Chr	Start	End	Strand
AfisC2G02425	chr2	367174334	367175230	-

Sequences

CDS

Protein

Gene

Functional annotation

Database	accession number	e-value	annotation
nr	BAD06448.1	3.7e-111	alliinase-like
Swissprot	P31757.2	1.2e-103	Cysteine sulphoxide lyase
trEMBL	Q76BK3	2.7e-111	Alliinase-like

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G34060.1	45.30	3e-75	278		Pyridoxal phosphate (PLP)-dependent transferases superfamily protein

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC2G02425	AT1G34060.1	298	152	7	9	298	3	297	45.30	3e-75	278
AfisC2G02425	AT1G34040.1	292	140	6	13	298	13	295	46.92	7e-70	260
AfisC2G02425	AT1G23320.1	215	107	7	93	298	22	228	42.33	4e-44	175

Ortholog group

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF04863.10	EGF_alliinase	Domain	38	92	99.5	9.1e-29
PF04864.10	Alliinase_C	Domain	95	298	326.4	1.7e-97

Gene Ontology

Accession	Ontology	Name
GO:0042742	P	defense response to bacterium
GO:0004021	F	L-alanine:2-oxoglutarate aminotransferase activity
GO:0005773	C	vacuole
GO:0005576	C	extracellular region
GO:0004838	F	L-tyrosine:2-oxoglutarate aminotransferase activity
GO:0005789	C	endoplasmic reticulum membrane
GO:0009641	P	shade avoidance
GO:0009684	P	indoleacetic acid biosynthetic process
GO:0009723	P	response to ethylene
GO:0009958	P	positive gravitropism
GO:0010078	P	maintenance of root meristem identity
GO:0010087	P	phloem or xylem histogenesis
GO:0010588	P	cotyledon vascular tissue pattern formation
GO:0030170	F	pyridoxal phosphate binding
GO:0043562	P	cellular response to nitrogen levels
GO:0047312	F	L-phenylalanine:pyruvate aminotransferase activity
GO:0047654	F	alliin lyase activity
GO:0048467	P	gynoecium development
GO:0048527	P	lateral root development
GO:0050048	F	L-leucine:2-oxoglutarate aminotransferase activity
GO:0050362	F	L-tryptophan:2-oxoglutarate aminotransferase activity
GO:0080022	P	primary root development
GO:0080097	F	L-tryptophan:pyruvate aminotransferase activity
GO:0080098	F	L-tyrosine:pyruvate aminotransferase activity
GO:0080099	F	L-methionine:2-oxoglutarate aminotransferase activity
GO:0080100	F	L-glutamine:2-oxoglutarate aminotransferase activity
GO:0080130	F	L-phenylalanine:2-oxoglutarate aminotransferase activity

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network