Detail information of AfisC2G02566
| Gene | Chr | Start | End | Strand |
|---|
| AfisC2G02566 | chr2 | 391053458 | 391093357 | - |
| Database | accession number | e-value | annotation |
|---|
| nr | XP_010921169.1 | 0.0e+00 | E3 ubiquitin-protein ligase SHPRH isoform X1 |
| Swissprot | Q7TPQ3.1 | 6.3e-141 | SNF2, histone-linker, PHD and RING finger domain-containing helicase |
| trEMBL | A0A6I9R7U4 | 0.0e+00 | E3 ubiquitin-protein ligase SHPRH isoform X1 |
| TAIR id | % identity | e-value | bit
score | gene aliases | Short description |
|---|
| AT2G40770.1 | 46.59 | 0.0 | 1407 | | zinc ion binding;DNA binding;helicases;ATP binding;nucleic acid binding |
>>>Show top 3 blast result 
| Query id | Subject id | alignment
length | mis
matches | gap openings | query
start | query
end | subject
start | subject
end | % identity | e-value | bit
score |
|---|
| AfisC2G02566 | AT2G40770.1 | 1687 | 802 | 34 | 3 | 1621 | 4 | 1659 | 46.59 | 0.0 | 1407 |
| AfisC2G02566 | AT5G22750.1 | 293 | 164 | 6 | 474 | 762 | 481 | 736 | 30.03 | 2e-33 | 142 |
| AfisC2G02566 | AT5G22750.1 | 277 | 153 | 7 | 1301 | 1577 | 794 | 1028 | 29.60 | 1e-24 | 113 |
| Pfam ID | Pfam name | type | alignment_start | alignment_end | bit_score | Evalue |
|---|
| PF00176.20 | SNF2_N | Family | 289 | 764 | 297.2 | 1.1e-88 |
| PF00271.28 | Helicase_C | Family | 1397 | 1523 | 28.7 | 1.2e-06 |
| KO | Name | Enzyme ID | Pathway | Pathway ID |
|---|
| K15710 | SHPRH; E3 ubiquitin-protein ligase SHPRH | EC:3.6.4.- 2.3.2.27 | - | - |