result

Gene information

Detail information of AfisC2G02691

Location

Gene	Chr	Start	End	Strand
AfisC2G02691	chr2	413291372	413294930	-

Sequences

CDS

>AfisC2G02691
ATGAACTCCAAATACATCTTCTTCCTCTTCTTTTTCTCACTCACAACGCTAACAGCCCTAACTCTATCCCAACCCGAATCCGAACTCCAGCTCCTGCTCTCCTTCAAGCGAAACCTAAACAACCCAAACCTGCTCTCCTCTTGGACCCGCAACCCAAAACGCATATGTTCTTTCTCAGGCGTATACTGCCAGAACTCCGTCGTCACTTCCGTCATCCTAACTGACCTTCCCCTTAACCTTGACTTCAGCGCCGTCGCAACCACGCTTCTCTTGCTTCCTAACTTGGAATCTCTCACCGTAATAAACAGCAACCTCACTGGCGATATCCTCACCTCCCGTTGTGGTGGTAAGGTCACCTCCCTCGATTTGTCCTCCAACTTGATCACTGGATCTGTTACCGACGTAGCTGGGCTGATTAGTATGTGTCCGTCTCTGCGGTCGCTGGATTTGTCCAAAAATCACATTGGCGGTGGTGGTACTGTCACCTCCGGAGAGATTAAACTGGAAAGGCTAGACCTTTCTTATAACAGGCTGTCTGTTACTGATTTAGAGTGGGTTTTATCAAGCAAGAATGTCTCGGTTGCTGGCAACAGAATCTCCGGGAACATTCCGGCAATAATGAACTGTTCTTGGACGGAAAGTCTTGATCTTTCCAACAATGAGTTTGACGGAGAGATTGGTGAGTGGATTTTCAAAGATTGCTTGAATCTCGCTTTCTTGAATTTAAGTTTCAATCATTTCAGTGGGAATATTCCTGGTTTGTTTGATTCTGACAAGAATGTGATTACTTATCTACATTTGGCCAACAATAATTTCTCTGGCAATCTCCCTATTGATGTTTTAAGTTCTTACAAGTATCTGAAAGTTCTTGATCTTGCATTCAACAATGTCAATGGAGAGCTCCCTGATTCGATTTCAAACCTTGCAAACCTGGAAGTTCTTGATTTGAGCTCAAATGGATTATCCGGTTCAATTCCTGGAAGATGTGGGACTAATTTGAAAGAGCTTTATCTACAGAACAATAAGTTTTCAGGCAGCATTCCAGATTCAATCGGTAACTGTTCAAAGCTTGTATCAATTGACTTGAGCTTTAATTATTTGACTGGGAAGATTCCAGCTTCTATAGGTGAGCTTTCAAACCTTAAAGATTTGTTAATGTGGCAGAACTATTTAGAAGGAGAGATCCCAAATGAGCTGATGAAGATAAGAAATCTTGAAAATTTGATTCTTGAAAATAACGGGTTAACGGGTACTTTACCCGAAGGCTTGCAACACTGTACTAATTTGAACTGGATTTCACTTTCCAGCAATCATTTAACAGGTACCATCCCTTCTTGGATTGGAAAATTGAGCAATCTTGCCATACTTAAACTTGGAAACAATTCATTTTATGGTAATATTCCAAATGAGTTAGGAGATTGTAAGAGTTTGATATGGCTAGACTTAAACAGCAATTTATTAAATGGAACCATACCTCCTTCCCTTTCAGAGCAATCTGGTTTCATTGCAGCTGGTTTAGTTACTGGAAGAAAATATGTGTATCTGAAAAACGATGGAAGTAGTTATTGTAGAGGATCAGGGAACCTTCTAGAATTTTCTGGAATCAAGCCTGAGGATTTAAACAGATTGCCTAGTCGTAAAACTTGTAATTTCACAAGGGTTTACATGGGAAACACTCAATACACATTCAACAACAATGGTTCTATGATCTTTCTCGACTTATCCTACAATGCACTCGAGGGAGAAATTCCAAAAGAATTTGGAAAAATGTACTATCTCATGATATTAAATCTCGGACATAACATGTTATCCGGCTCTATCCCTTCTGATTTAGGAGGTATGAGATACGTAGCGGTTCTCGACCTCTCTCATAATACACTAGAAGGTGAAATCCCTAATTCATTTTCAAGTCTTTCCATGTTGTCGGAGATCGATCTCTCGAGTAATAACCTGAGTGGCAAAATACCAGAGTCAGGGTCCTTGGTAACATTTCCACCCGACCGCTATGCAAACAATTCGGGACTTTGTGGTGTTCCTCTCGTCTCTTGTGAAGACCTTGATTCCTCCAAAGCCAAAAACGAAAAGAGTAGATCACGTAAAGGGTCCTTATTTGGAAGTGTTACCATTGGGTTGCTCTTAGCCGTATTTGCATTAGTAGCATTTATAATCGTTGTCATCGAAAGTAAAAAGAGGGCAAAGAAGAAAACAATGAGCGATAACGATAGCTTACGTGACATCTACATTGATAGCAACTCACATTCAAACATAAAATCCATGATGAACACGAAGGAAGCCTTGAGCATCACCCTTGCCACATTCGACAAATTCGATAAACCTCTTCAAAAGCTCACCTTCCAAGACCTCATTGATGCCACCAATAACTTCCACCATGAAGCTCAAATTGGGTCGGGTGGGTTCGGAGATGTGTACAAAGCCCAACTTAAAGATGGTAGGCTAGTTGCCATAAAAAAGCTCGTTCATGTAAGTGGCCAAGGAGAAAGAGAATTCACAGCAGAAATGGAAACAATAGGCAAAGTAAAACACCGAAACTTGGTACCACTTCTAGGCTACTGCAGAGTAGGAGATGAAAGACTCTTGGTGTATGAATACATGAAATACGGAAGTTTAGAAGATGTTCTACATAATTGGAAGAAGTCTGGCATAAAACTGAACTGGGCTGCAAGAAGAAAAATAGCAGTGGGTGCAGCTAGAGGGTTGGCGTTTCTTCACCATAGCTGCACTCCTCATATAATACATAGAGACATGAAATCGAGCAACGTGCTCATAGATGAGAATCTCGAAGCAAGGGTTTCTGACTTTGGCATGGCTAGAGAAATGAATGTGATGGATACACATTTGAGTGTATCTACCTTAGCAGGTACCCCTGGTTATGTGCCACCTGAATATTATCAGAGTTTTAGGTGCACTACAAAAGGCGACGTGTATAGTTATGGCGTGGTGCTTTTAGAGTTGTTAACGGGTAAGAATCCTACCGATTCCATTGATTTTGGAGATAACAACCTTGTTGGTTGGGTGAAGCAGCATTCTAAAGTTAGAATAAGCGATGTTTTCGATAAGGAGTTGATGAAGGAAGATCCCAAGATTGAGCTGGAGTTATTAGAGCATCTTAAGATTGCTTGTGCTTGCTTGGATGATAGACCTTTAAGAAGGCCTACTATGGTCAATGTGATGGCTATGTTTAAAGAGATTCAGACCGGAGATTTGAATTTTAAGGTTGTTGATATGAGCTTGAAGGAAGGCAAAGAAGATGGGGATTAA

Protein

>AfisC2G02691
MNSKYIFFLFFFSLTTLTALTLSQPESELQLLLSFKRNLNNPNLLSSWTRNPKRICSFSGVYCQNSVVTSVILTDLPLNLDFSAVATTLLLLPNLESLTVINSNLTGDILTSRCGGKVTSLDLSSNLITGSVTDVAGLISMCPSLRSLDLSKNHIGGGGTVTSGEIKLERLDLSYNRLSVTDLEWVLSSKNVSVAGNRISGNIPAIMNCSWTESLDLSNNEFDGEIGEWIFKDCLNLAFLNLSFNHFSGNIPGLFDSDKNVITYLHLANNNFSGNLPIDVLSSYKYLKVLDLAFNNVNGELPDSISNLANLEVLDLSSNGLSGSIPGRCGTNLKELYLQNNKFSGSIPDSIGNCSKLVSIDLSFNYLTGKIPASIGELSNLKDLLMWQNYLEGEIPNELMKIRNLENLILENNGLTGTLPEGLQHCTNLNWISLSSNHLTGTIPSWIGKLSNLAILKLGNNSFYGNIPNELGDCKSLIWLDLNSNLLNGTIPPSLSEQSGFIAAGLVTGRKYVYLKNDGSSYCRGSGNLLEFSGIKPEDLNRLPSRKTCNFTRVYMGNTQYTFNNNGSMIFLDLSYNALEGEIPKEFGKMYYLMILNLGHNMLSGSIPSDLGGMRYVAVLDLSHNTLEGEIPNSFSSLSMLSEIDLSSNNLSGKIPESGSLVTFPPDRYANNSGLCGVPLVSCEDLDSSKAKNEKSRSRKGSLFGSVTIGLLLAVFALVAFIIVVIESKKRAKKKTMSDNDSLRDIYIDSNSHSNIKSMMNTKEALSITLATFDKFDKPLQKLTFQDLIDATNNFHHEAQIGSGGFGDVYKAQLKDGRLVAIKKLVHVSGQGEREFTAEMETIGKVKHRNLVPLLGYCRVGDERLLVYEYMKYGSLEDVLHNWKKSGIKLNWAARRKIAVGAARGLAFLHHSCTPHIIHRDMKSSNVLIDENLEARVSDFGMAREMNVMDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVVLLELLTGKNPTDSIDFGDNNLVGWVKQHSKVRISDVFDKELMKEDPKIELELLEHLKIACACLDDRPLRRPTMVNVMAMFKEIQTGDLNFKVVDMSLKEGKEDGD

Gene

>AfisC2G02691
TATATATCCTTTTTTTCCCCCGACTCTCCTCCAAAACTTGCTTCTCTCCTTTTTCTCTCTTCCTATTTTCTCATGGCTGAATCCGAGCTCTAAACCCAACCCAAACCCTTTCTACTACTCTCCCTCAGCTTCAAATAAAAATGAACTCCAAATACATCTTCTTCCTCTTCTTTTTCTCACTCACAACGCTAACAGCCCTAACTCTATCCCAACCCGAATCCGAACTCCAGCTCCTGCTCTCCTTCAAGCGAAACCTAAACAACCCAAACCTGCTCTCCTCTTGGACCCGCAACCCAAAACGCATATGTTCTTTCTCAGGCGTATACTGCCAGAACTCCGTCGTCACTTCCGTCATCCTAACTGACCTTCCCCTTAACCTTGACTTCAGCGCCGTCGCAACCACGCTTCTCTTGCTTCCTAACTTGGAATCTCTCACCGTAATAAACAGCAACCTCACTGGCGATATCCTCACCTCCCGTTGTGGTGGTAAGGTCACCTCCCTCGATTTGTCCTCCAACTTGATCACTGGATCTGTTACCGACGTAGCTGGGCTGATTAGTATGTGTCCGTCTCTGCGGTCGCTGGATTTGTCCAAAAATCACATTGGCGGTGGTGGTACTGTCACCTCCGGAGAGATTAAACTGGAAAGGCTAGACCTTTCTTATAACAGGCTGTCTGTTACTGATTTAGAGTGGGTTTTATCAAGCAAGAATGTCTCGGTTGCTGGCAACAGAATCTCCGGGAACATTCCGGCAATAATGAACTGTTCTTGGACGGAAAGTCTTGATCTTTCCAACAATGAGTTTGACGGAGAGATTGGTGAGTGGATTTTCAAAGATTGCTTGAATCTCGCTTTCTTGAATTTAAGTTTCAATCATTTCAGTGGGAATATTCCTGGTTTGTTTGATTCTGACAAGAATGTGATTACTTATCTACATTTGGCCAACAATAATTTCTCTGGCAATCTCCCTATTGATGTTTTAAGTTCTTACAAGTATCTGAAAGTTCTTGATCTTGCATTCAACAATGTCAATGGAGAGCTCCCTGATTCGATTTCAAACCTTGCAAACCTGGAAGTTCTTGATTTGAGCTCAAATGGATTATCCGGTTCAATTCCTGGAAGATGTGGGACTAATTTGAAAGAGCTTTATCTACAGAACAATAAGTTTTCAGGCAGCATTCCAGATTCAATCGGTAACTGTTCAAAGCTTGTATCAATTGACTTGAGCTTTAATTATTTGACTGGGAAGATTCCAGCTTCTATAGGTGAGCTTTCAAACCTTAAAGATTTGTTAATGTGGCAGAACTATTTAGAAGGAGAGATCCCAAATGAGCTGATGAAGATAAGAAATCTTGAAAATTTGATTCTTGAAAATAACGGGTTAACGGGTACTTTACCCGAAGGCTTGCAACACTGTACTAATTTGAACTGGATTTCACTTTCCAGCAATCATTTAACAGGTACCATCCCTTCTTGGATTGGAAAATTGAGCAATCTTGCCATACTTAAACTTGGAAACAATTCATTTTATGGTAATATTCCAAATGAGTTAGGAGATTGTAAGAGTTTGATATGGCTAGACTTAAACAGCAATTTATTAAATGGAACCATACCTCCTTCCCTTTCAGAGCAATCTGGTTTCATTGCAGCTGGTTTAGTTACTGGAAGAAAATATGTGTATCTGAAAAACGATGGAAGTAGTTATTGTAGAGGATCAGGGAACCTTCTAGAATTTTCTGGAATCAAGCCTGAGGATTTAAACAGATTGCCTAGTCGTAAAACTTGTAATTTCACAAGGGTTTACATGGGAAACACTCAATACACATTCAACAACAATGGTTCTATGATCTTTCTCGACTTATCCTACAATGCACTCGAGGGAGAAATTCCAAAAGAATTTGGAAAAATGTACTATCTCATGATATTAAATCTCGGACATAACATGTTATCCGGCTCTATCCCTTCTGATTTAGGAGGTATGAGATACGTAGCGGTTCTCGACCTCTCTCATAATACACTAGAAGGTGAAATCCCTAATTCATTTTCAAGTCTTTCCATGTTGTCGGAGATCGATCTCTCGAGTAATAACCTGAGTGGCAAAATACCAGAGTCAGGGTCCTTGGTAACATTTCCACCCGACCGCTATGCAAACAATTCGGGACTTTGTGGTGTTCCTCTCGTCTCTTGTGAAGACCTTGATTCCTCCAAAGCCAAAAACGAAAAGAGTAGATCACGTAAAGGGTCCTTATTTGGAAGTGTTACCATTGGGTTGCTCTTAGCCGTATTTGCATTAGTAGCATTTATAATCGTTGTCATCGAAAGTAAAAAGAGGGCAAAGAAGAAAACAATGAGCGATAACGATAGCTTACGTGACATCTACATTGATAGCAACTCACATTCAAACATAAAATCCATGATGAACACGAAGGAAGCCTTGAGCATCACCCTTGCCACATTCGACAAATTCGATAAACCTCTTCAAAAGCTCACCTTCCAAGACCTCATTGATGCCACCAATAACTTCCACCATGAAGCTCAAATTGGGTCGGGTGGGTTCGGAGATGTGTACAAAGCCCAACTTAAAGATGGTAGGCTAGTTGCCATAAAAAAGCTCGTTCATGTAAGTGGCCAAGGAGAAAGAGAATTCACAGCAGAAATGGAAACAATAGGCAAAGTAAAACACCGAAACTTGGTACCACTTCTAGGCTACTGCAGAGTAGGAGATGAAAGACTCTTGGTGTATGAATACATGAAATACGGAAGTTTAGAAGATGTTCTACATAATTGGAAGAAGTCTGGCATAAAACTGAACTGGGCTGCAAGAAGAAAAATAGCAGTGGGTGCAGCTAGAGGGTTGGCGTTTCTTCACCATAGCTGCACTCCTCATATAATACATAGAGACATGAAATCGAGCAACGTGCTCATAGATGAGAATCTCGAAGCAAGGGTTTCTGACTTTGGCATGGCTAGAGAAATGAATGTGATGGATACACATTTGAGTGTATCTACCTTAGCAGGTACCCCTGGTTATGTGCCACCTGAATATTATCAGAGTTTTAGGTGCACTACAAAAGGCGACGTGTATAGTTATGGCGTGGTGCTTTTAGAGTTGTTAACGGGTAAGAATCCTACCGATTCCATTGATTTTGGAGATAACAACCTTGTTGGTTGGGTGAAGCAGCATTCTAAAGTTAGAATAAGCGATGTTTTCGATAAGGAGTTGATGAAGGAAGATCCCAAGATTGAGCTGGAGTTATTAGAGCATCTTAAGATTGCTTGTGCTTGCTTGGATGATAGACCTTTAAGAAGGCCTACTATGGTCAATGTGATGGCTATGTTTAAAGAGATTCAGACCGGAGATTTGAATTTTAAGGTTGTTGATATGAGCTTGAAGGAAGGCAAAGAAGATGGGGATTAAGGAACGTTGAGTTTTAGGTTGGTAGTGTTAATTGTATATCATTTTACAAGAAGTTTTGTTCATTTGTATACCTTGATAAAGAATGCTGTAACGTTGTTATGTTAGTGTTGTTGTATATATTTGAAGTGATTTTCAGTTCA

Functional annotation

Database	accession number	e-value	annotation
nr	RWV97267.1	1.8e-219	hypothetical protein GW17_00039958
Swissprot	Q8L899.1	1.6e-193	Brassinosteroid LRR receptor kinase
trEMBL	A0A444DGM5	1.3e-219	non-specific serine/threonine protein kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G39400.1	56.02	0.0	1171	ATBRI1;BIN1;BRI1;CBB2;DWF2	Leucine-rich receptor-like protein kinase family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	bit score
AfisC2G02691	AT4G39400.1	1171	394	21	28	1089	35	1193	56.02	1171
AfisC2G02691	AT1G55610.2	1138	494	27	28	1086	34	1154	48.15	952
AfisC2G02691	AT1G55610.1	1138	494	27	28	1086	34	1154	48.15	952

Ortholog group

Species	Genes
Allium cepa	g258443.t1
Allium fistulosum	AfisC2G02691
Allium sativum	Asa0G00093.1; Asa2G07054.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF08263.9	LRRNT_2	Family	26	63	31.8	1.2e-07
PF13516.3	LRR_6	Repeat	142	159	14.8	0.019
PF13855.3	LRR_8	Repeat	263	321	27.2	2.1e-06
PF13855.3	LRR_8	Repeat	331	391	28.7	7.5e-07
PF13855.3	LRR_8	Repeat	428	487	28.6	7.8e-07
PF13855.3	LRR_8	Repeat	593	651	30.2	2.5e-07
PF00069.22	Pkinase	Domain	795	1065	163.7	4.7e-48

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0016021	C	integral component of membrane
GO:0001578	P	microtubule bundle formation
GO:0001653	F	peptide receptor activity
GO:0004675	F	transmembrane receptor protein serine/threonine kinase activity
GO:0004714	F	transmembrane receptor protein tyrosine kinase activity
GO:0004903	F	growth hormone receptor activity
GO:0007169	P	transmembrane receptor protein tyrosine kinase signaling pathway
GO:0005496	F	steroid binding
GO:0005524	F	ATP binding
GO:0006468	P	protein phosphorylation
GO:0009507	C	chloroplast
GO:0009554	P	megasporogenesis
GO:0009556	P	microsporogenesis
GO:0009611	P	response to wounding
GO:0009647	P	skotomorphogenesis
GO:0009729	P	detection of brassinosteroid stimulus
GO:0009734	P	auxin-activated signaling pathway
GO:0009742	P	brassinosteroid mediated signaling pathway
GO:0009826	P	unidimensional cell growth
GO:0009911	P	positive regulation of flower development
GO:0010008	C	endosome membrane
GO:0010224	P	response to UV-B
GO:0010233	P	phloem transport
GO:0010234	P	anther wall tapetum cell fate specification
GO:0010268	P	brassinosteroid homeostasis
GO:0010305	P	leaf vascular tissue pattern formation
GO:0010584	P	pollen exine formation
GO:0019901	F	protein kinase binding
GO:0031347	P	regulation of defense response
GO:0042803	F	protein homodimerization activity
GO:0043234	C	protein complex
GO:0045851	P	pH reduction
GO:0046982	F	protein heterodimerization activity
GO:0048366	P	leaf development
GO:0060548	P	negative regulation of cell death
GO:1900140	P	regulation of seedling development

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K13415	BRI1; protein brassinosteroid insensitive 1	EC:2.7.10.1 2.7.11.1	Plant hormone signal transduction	ko04075

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network