result

Gene information

Detail information of AfisC2G02747

Location

Gene	Chr	Start	End	Strand
AfisC2G02747	chr2	421911266	421915359	+

Sequences

CDS

>AfisC2G02747
ATGTTTTTCGTGGAGGCAGCTGGAAGTTTGCACCACTCGTACAATCGGAAGCAGAAATCGCTAGGGCTGCTTTGTTCCAAATTTATGGAGTTATACGATAGAGATGATGTAGATGAAGTGGGTTTAGATGATGCAGCTCGGAATCTCTGTGTAGAGAGACGGAGAGTTTATGATATTGTAAATGTGCTGGAGAGTATCGGGGTTCTTGCGAGGAAAGCAAAAAATCAGTACTCTTGGATTGGGTTTTGTGGGATTCCAAGAGCGTTAGAAATTTTCAGGGAAAAAGCACTGAAGGAAAAATCAGGAATTAACGTGGAAGCTAGATGTTCACAGAAAACAATATGCTCACAGGAAGATCACGAGGAAGATGATGAAGATGAAAAGCCTTTAAATCACAGTGAAGATCAGAGAGAGGAGAGGTGCAATACTGTTTTCAGCAGTTGGCTAGGAGCAAAACATAAGAGAGAAAAATCACTTGGAATGCTTACAGAAAATTTTGTGAAACTATTCCTAGCCTCTGATGCTGATACAGTAACACTTGATGAAGCTGCAAAGAATCTGCTCGGTGACAGCCACGAGCCATCACAAACAAAATCTAAAGTTAGAAGACTATATGATATAGCAAATGTCCTATCTTCACTCAACCTAATTGAAAAGACACATCATGTTGAGACTAGAAAGCCAGCATTTAGATGGTTAGGATTTAACAGAAAGCAAAGCGAAGCTACAGTTGCAGTACCATCTAAAACGAATAAGAGGTCATTTGGAATGGACGTCAGCAACATTGAAATGAGCAAAAGAAGAAAAGTGATGGCTACGGCTGAGAAGAAATATGTTCAAACACAAACAGTTAGAGATGATCTAACTGCATGCGATCTTACTGTTCAGAAACAATTTCAAACTAAAGGATACTCTTTTCTACCTTCTACTCCAGCTGCAGCGATAAAAAAAGAAGAAATTGATGAAGAAAAAAGTGAGAAAGTTGCCTGTGATGGTGCTTCTGAGGATTTGACAACTAATTTTCGCCCTGATTATCGCAATCAAGCTTTGCATGATCTATTTGGTCACTACGTGCAAGTATGGAATAAGTGGTATGCAGAAATAGCTCCAGTAAGGGACACTACATAA

Protein

Gene

>AfisC2G02747
AATACCCTCATATTTATTTCCCACCATTTCAAGATTTCTACCCGAGTTATCAATTCAATCATCGAGCCGTTCAGAATCACGTCGTATTCTGCAATGTTTTTCGTGGAGGCAGCTGGAAGTTTGCACCACTCGTACAATCGGAAGCAGAAATCGCTAGGGCTGCTTTGTTCCAAGTACATATTTTCTTATCAGATCCGACTTATTGTTTTTTTTTTCTTTCTGTTTTTTTCAATGAATTTTCAACAATAATTTGGTTTATTAATTAATTTATTTTAGATTTATGGAGTTATACGATAGAGATGATGTAGATGAAGTGGGTTTAGATGATGCAGCTCGGAATCTCTGTGTAGAGAGACGGAGAGTTTATGATATTGTAAATGTGCTGGAGAGTATCGGGGTGAGATAACCTCCCCAATCGGATTTATCGTTTCATCGTTTATTTTGATATTTACTGGCTTTCATTTCTGTTTGCTAGGTTCTTGCGAGGAAAGCAAAAAATCAGTACTCTTGGATTGGGTTTTGTGGGATTCCAAGAGCGTTAGAAATTTTCAGGGTATGCCTTAATTTTCTTTAACATTGGCAGTACTTAATTCATGATTTGGCCCTCAAAACTTGGAATTTTATTTTATAGGCTTTCCGCTTTACTGTACGATTTATTTGTTGTTAGCCAGGTAGTAAAGTTATCCCTCCATCGCATTCCTTATTTCGTGGAAGATTAGGAGAATTAGGTAGGGGGCGAGGATTTTTTATTTGAGACAAAATCAACAAACCCACAACTTTATTTTAAGGCAAATTCTACCCTTTTGATTGTTTTTGTCTAAATTTACGTTTTATATTTTTTCTCAGATTTTCTGTCCACCATGTAGTTGCAACTCCATGGTGCCTTCAGGGCACCTGCATGGTACCTTGAAGGCACCACGCTGGGCACTGCGAGGAAGAGTATTTTTGGGGTTTTTTCCTGTTCAGATGGGACGACTCAGCAAAATGAGGGGTTTCTTTATTTTTTTAAGAACTTGGAAGGCTACTCAGCATTTACCTATGTTCAAATAGAATTTGCCTTATTTTTAATTCTTATCATAGGATGGACGCTTTTTAATTACACGACTGACGTCCTTTTCTTTTAAAACTCATTTGATTAAAACCCTGAACATTAAAACAAACAAATTTGGTCGAATTTAATCAAGAGTATTGAATATGGATATGAAACTGTTCTGAACTCACTGTGTTGAAGCTCTGCGTGATTGCAATATAAGTCTCACACTTCAGTCCCTTCAAATTAAGGTAGGCTTAATCATTTAGGATTTTGTAGATCATTTTCCATACAAATTTGAAGAAGGGATCCGTAAAGATTTCAAAGGATCCCTACATAACTAATTCTACTGTGTACAGTCGGAATCAATCGATGATTTTATTTTTAACATTTAATTTATCACATCGAGAATCTCTTCACCTTGATTTGAAGAACTCTCTATTTTCTCTCTGTAGTCTATCAACCTTGTACAACTTGCATCCTTGTCTTGTGTGCAAAAAATGCATATCTCCTCTCCAAGCTTTACCAACTCAACCTTTATATTTCTTGTTTTCCTAGTACTTTGATTGATATTCATTTTTGGTTGATTAATATTTCATATTGGGTTAATATGATATATGTTTCTTATGGAAAAGCGCAAGTGTCTGGGGTCTGCAATTTTTGGTTTATGTGGTATTTATTGTAGGGGTCCTTTGAAATCATGGTTGCAATGCTATGTTAGACTTTTCGAATACTTCGTATTGTCCACCATTACTTCTTCTCTATGTATTTATTCAAAATTATGTTGCTATGTTTGTTCATATAAGAATTTTTTTTAAAAGCACAAGTGTTTGTTGAAGTGGCAAAAAAGGTCACTGCAAATAGCAGACTAGATATATATAATTGACATATTTTGATTCTTTGAAGGCTCAGCATGTAATTATTTTTGAGTATATATTTGACTATATTTCTTTATTTAAATAGGAAAAAGCACTGAAGGAAAAATCAGGAATTAACGTGGAAGCTAGATGTTCACAGAAAACAATATGCTCACAGGAAGTAAGTTTAAATTTGCTTGTTTACACTGACTTGTGCAGGATGCTGTTTTAGTAATAAGGATAATCAAATTGAAAGCTGTTTTAATTCGATATAGGATCACGAGGAAGATGATGAAGATGAAAAGCCTTTAAATCACAGTGAAGATCAGAGAGAGGAGAGGTGCAATACTGTTTTCAGCAGTTGGCTAGGAGCAAGTAATGCTACTTAAACATGAAACTTAATTACTGTTCATCGACTTCTGCCTCTGTAGCTGACCATTTGTTTCAATGTACAGAACATAAGAGAGAAAAATCACTTGGAATGCTTACAGAAAATTTTGTGAAACTATTCCTAGCCTCTGATGTAAGTATTTAGAAAATTTTGTGTGTTTTCCTTTCTTTTTCTCTTTGATTGGCTCTGTTTAATCATCATATAATTCATTTCACAGTTGTAAAAAATGATTGTTAACTAAGTCCAAGGCTATCCATATCTTTTATAGGAGCTATGTAATTTTTCTAGTTGGGTAGGCATGGTTATATTTGAAAGATCTTTTTATCTTTTGTCCATTTGCTAAATCATATATCCTTTCACATGTTATGGGCGTCTTGTATAAACTAGAGAGAAAACCGAATTTTGTCTTCAATCATCTCTATCTTTCCATTTCTCTGCCATGGTCAGACATTGATTTGTTCATAATTGATTGCTTCCATTTATGTAATTTGTTTAACGGGCATTCAACGTTTCATCATATCTACTCTTCGTTGAAGTTCAATTACTAACTTTAGCTGTCATGCAGCTACTTTCAGTCTCTACAATTATATTTGTGAAACTCATCTTTACAACCTAATTTTTTATCGTTAGTTTCAATTAAGGTGCAGATGTTTCTTTCATTCTCACTTCCTTTTTACCATTATTAATTGACATTGATCCATTGCAACAATATATCTAATAGGCTGATACAGTAACACTTGATGAAGCTGCAAAGAATCTGCTCGGTGACAGCCACGAGCCATCACAAACAAAATGTAGTGCTTTTGAATCCACTGTCTTGATTTCCATTATTTTATTTCAGTAGATGGTCATTTACTTACCTTAAAAGATAACAATGCAGCTAAAGTTAGAAGACTATATGATATAGCAAATGTCCTATCTTCACTCAACCTAATTGAAAAGGTATAAGAATTTGAAATATCAATTCCTTATAAACCATTTTACTTTGTAGTTACCATAACCTCCTTTTTTAAATAAATTTTTTTGGGTACAGACACATCATGTTGAGACTAGAAAGCCAGCATTTAGATGGTTAGGATTTAACAGAAAGCAAAGCGAAGCTACAGTTGCAGTACCATCTAAAACGAATAAGAGGTCATTTGGAATGGACGTCAGCAACATTGAAATGAGCAAAAGAAGAAAAGTGATGGCTACGGCTGAGAAGAAATATGTTCAAACACAAACAGTTAGAGATGATCTAACTGCATGCGATCTTACTGTTCAGAAACAATTTCAAACTAAAGGATACTCTTTTCTACCTTCTACTCCAGCTGCAGCGATAAAAAAAGAAGAAATTGATGAAGAAAAAAGTGAGAAAGTTGCCTGTGATGGTGCTTCTGAGGATTTGACAACTAATTTTCGCCCTGATTATCGCAATCAAGGTTTGAAAATTGCATCAAGCTTTATAAGTGTTTTTTAAATATAAATGATACCGCATGTAGAAGCTTTCAAATGATTAGTTGTTCTGAATTAGGTAAACAATTTGTCTATGTTCAGTTTTTGACTCTTTGTCTATGTTTCTATTCAACAGCTTTGCATGATCTATTTGGTCACTACGTGCAAGTATGGAATAAGTGGTATGCAGAAATAGCTCCAGTAAGGGACACTACATAAAGGCTTCATACATCAAACTATCCATTCCCTACATTTAGAGAGATACATATTCCATTTTATATATATTTATTTTTATATATCTTGTAGGCAAGATATGTGTTTATCTATATGAAATGTATCAAAACTTCATCAATATACAGTCGTTGAAATACTTGAGAAAAAC

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020244212.1	5.2e-102	E2F transcription factor-like E2FE
Swissprot	Q8LSZ4.1	3.1e-67	E2F-like repressor E2L3
trEMBL	A0A5P1FJA0	5.8e-95	E2F transcription factor-like E2FF

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G48160.2	40.62	1e-76	283	DEL1;E2FE;E2L3	DP-E2F-like 1

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC2G02747	AT3G48160.2	389	192	9	10	375	28	400	40.62	1e-76	283
AfisC2G02747	AT3G01330.1	355	183	6	14	368	19	350	41.97	3e-71	266
AfisC2G02747	AT3G48160.1	365	180	8	10	354	28	376	40.82	8e-70	260

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF02319.17	E2F_TDP	Domain	17	81	75.1	2.9e-21
PF02319.17	E2F_TDP	Domain	156	234	73.9	7.2e-21

Gene Ontology

Accession	Ontology	Name
GO:0000077	P	DNA damage checkpoint
GO:0000122	P	negative regulation of transcription from RNA polymerase II promoter
GO:0000790	C	nuclear chromatin
GO:0000978	F	RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0001047	F	core promoter binding
GO:0001078	F	transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding
GO:0001946	P	lymphangiogenesis
GO:0002040	P	sprouting angiogenesis
GO:0003714	F	transcription corepressor activity
GO:0005737	C	cytoplasm
GO:0005667	C	transcription factor complex
GO:0008045	P	motor neuron axon guidance
GO:0008134	F	transcription factor binding
GO:0008284	P	positive regulation of cell proliferation
GO:0009733	P	response to auxin
GO:0016740	F	transferase activity
GO:0030330	P	DNA damage response, signal transduction by p53 class mediator
GO:0030900	P	forebrain development
GO:0032466	P	negative regulation of cytokinesis
GO:0032876	P	negative regulation of DNA endoreduplication
GO:0032877	P	positive regulation of DNA endoreduplication
GO:0033301	P	cell cycle comprising mitosis without cytokinesis
GO:0042803	F	protein homodimerization activity
GO:0043276	P	anoikis
GO:0044458	P	motile cilium assembly
GO:0045599	P	negative regulation of fat cell differentiation
GO:0045944	P	positive regulation of transcription from RNA polymerase II promoter
GO:0071930	P	negative regulation of transcription involved in G1/S transition of mitotic cell cycle
GO:0060707	P	trophoblast giant cell differentiation
GO:0060718	P	chorionic trophoblast cell differentiation
GO:0070345	P	negative regulation of fat cell proliferation
GO:0070365	P	hepatocyte differentiation
GO:0071466	P	cellular response to xenobiotic stimulus
GO:0072332	P	intrinsic apoptotic signaling pathway by p53 class mediator
GO:0098534	P	centriole assembly
GO:1903251	P	multi-ciliated epithelial cell differentiation
GO:1990086	P	lens fiber cell apoptotic process
GO:2000134	P	negative regulation of G1/S transition of mitotic cell cycle

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K09391	E2F7_8; transcription factor E2F7/8	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network