result

Gene information

Detail information of AfisC2G02755

Location

Gene	Chr	Start	End	Strand
AfisC2G02755	chr2	422758254	422759422	-

Sequences

CDS

Protein

Gene

>AfisC2G02755
ATGCCTTCAGATGGTAGTTGTGATAAAATTTGTGTTGCAATCAAGAGATTAAATGAGAAGGGTTTGCAGGTATACTTCTTATTTAATTTATCGTTGTTCTTCTTTTTTTTCTTTTTTTCTTCTGTGTAATATATTGTGTGATTAGTTGTCTTAATTGATCTTCTTCATGTCCAACGTCTCGAACCAGAAATTGACATCAGTCCATTGTATATTTCATAAATATTGAATTTATTTCCTTGTAAGATTCGAACATGCACAAGCTAGCTGCTGTATGGGTTACTTCAAACTGATTGTATTTGTTAGTGTAAATTTCACTAATTGTATATAGTTAATTGATCCTTGTCTAATGGATTCGAATATGATAGTTAACATTCTGTGTTTATTTGTTTGTCTTCTTGGTTGTATGAAAGTAGTGTAAAACAAAGTGTATTAACTAAAGTAATATATGTAAACTTAATTGCAAATGGCATTTGACTGAAGTATTATATTGTTGCTAACCTACATATGTACTAATATGACAAAGAAATAGAATCCAAAGGACCTAATTAGTAATAATGTTGCATTTTTACCAACATTTTTGTCTACTATGTATCAATAAAGCAGCAGTTAGGACTTAGGACACCAATATAGAGAAGAAAACAAGTTTTTTTTATGTATGCCACTTACTATACATAGTAAAATAGACATCTGATATTCAAGTAATATGATGCATCATCTAATGCAGGGACATAAAGAATTTCTAGCTGAAGTTCAATTTCTTGGAATGGTAAATCATCGTAACCTTGTTAAACTAATAGGATACTGTGCTGAAGATAATGAAAACACAATCCAAAGGCTTTTAGTATATGAATTCATGCCAAATAAGAGCTTAGAAGATCATCTATTTAGTCGAGCATATCCTTGTATTCCATGGAATGTGAGGCTTCAGATTGCCTTAGGGGCTGCTGAAGGTTTGGCTTACTTGCACGAGGGTTTGGAAATTCAGGTAAACCTGCATATTGATATAGCAGAGGACATATACTTCAAATACAACTCATTTGTATATCTTGATCTGAACATTTATGCATTTGATGATAGGTAATTTTTAGGGATTTCAAAGCATCGAATGTACTACTAGACAAGGAGTTCAAGCCTAAGCATCGAATGGAAGTTCTCATGTATCAACAGCG

Functional annotation

Database	accession number	e-value	annotation
nr	ONK59153.1	8.5e-58	uncharacterized protein A4U43_C08F3530
Swissprot	Q9LTC0.1	2.9e-42	PBS1-like protein 19
trEMBL	A0A6J0PQ18	7.0e-54	probable serine/threonine-protein kinase PBL19

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G47070.1	65.35	1e-44	174		Protein kinase superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC2G02755	AT5G47070.1	127	41	1	4	130	110	233	65.35	1e-44	174
AfisC2G02755	AT2G28940.2	129	47	1	3	130	126	254	62.79	2e-43	171
AfisC2G02755	AT3G09830.2	125	48	0	6	130	109	233	61.60	2e-42	167

Ortholog group

Species	Genes
Allium cepa
Allium fistulosum	AfisC2G02755
Allium sativum	Asa0G02665.1; Asa1G03175.1; Asa2G00998.1; Asa8G01588.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF07714.14	Pkinase_Tyr	Domain	8	126	66.1	2.5e-18

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0005515	F	protein binding
GO:0002221	P	pattern recognition receptor signaling pathway
GO:0042742	P	defense response to bacterium
GO:0004675	F	transmembrane receptor protein serine/threonine kinase activity
GO:0005524	F	ATP binding
GO:0005634	C	nucleus
GO:0006468	P	protein phosphorylation
GO:0007166	P	cell surface receptor signaling pathway
GO:0009507	C	chloroplast
GO:0052033	P	pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response
GO:0080142	P	regulation of salicylic acid biosynthetic process

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network